RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ILDR1Q86SU0 546 aaPredicted RBP19.44■□□□□ 0.7
APOBEC3B-202ENST00000335760 LRRC59Q96AG4 307 aaKnown RBP19.44■□□□□ 0.7
APOBEC3B-202ENST00000335760 PANK3Q9H999 370 aa19.44■□□□□ 0.7
APOBEC3B-202ENST00000335760 SPATA31A3Q5VYP0 1347 aa19.43■□□□□ 0.7
APOBEC3B-202ENST00000335760 BRD4O60885 1362 aaPredicted RBP19.42■□□□□ 0.7
APOBEC3B-202ENST00000335760 SSH2Q76I76 1423 aa19.42■□□□□ 0.7
APOBEC3B-202ENST00000335760 LMOD2Q6P5Q4 547 aa19.42■□□□□ 0.7
APOBEC3B-202ENST00000335760 CARD14Q9BXL6 1004 aa19.42■□□□□ 0.7
APOBEC3B-202ENST00000335760 TTC21BQ7Z4L5 1316 aa19.42■□□□□ 0.7
APOBEC3B-202ENST00000335760 NRKQ7Z2Y5 1582 aa19.41■□□□□ 0.7
APOBEC3B-202ENST00000335760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.41■□□□□ 0.7
APOBEC3B-202ENST00000335760 TNS3Q68CZ2 1445 aa19.41■□□□□ 0.7
APOBEC3B-202ENST00000335760 EDC4Q6P2E9 1401 aaKnown RBP19.41■□□□□ 0.7
APOBEC3B-202ENST00000335760 ALS2Q96Q42 1657 aa19.39■□□□□ 0.69
APOBEC3B-202ENST00000335760 NSD3Q9BZ95 1437 aa19.39■□□□□ 0.69
APOBEC3B-202ENST00000335760 TTC21AQ8NDW8 1320 aa19.38■□□□□ 0.69
APOBEC3B-202ENST00000335760 ABTB2Q8N961 1025 aa19.38■□□□□ 0.69
APOBEC3B-202ENST00000335760 ARHGEF10O15013 1369 aa19.37■□□□□ 0.69
APOBEC3B-202ENST00000335760 JCADQ9P266 1359 aa19.37■□□□□ 0.69
APOBEC3B-202ENST00000335760 PNPLA6Q8IY17 1366 aa19.36■□□□□ 0.69
APOBEC3B-202ENST00000335760 NUTM2GQ5VZR2 741 aa19.36■□□□□ 0.69
APOBEC3B-202ENST00000335760 PIK3C2AO00443 1686 aa19.35■□□□□ 0.69
APOBEC3B-202ENST00000335760 PLEKHG5O94827 1062 aa19.35■□□□□ 0.69
APOBEC3B-202ENST00000335760 DDX10Q13206 875 aaKnown RBP19.35■□□□□ 0.69
APOBEC3B-202ENST00000335760 NME9Q86XW9 330 aa19.35■□□□□ 0.69
APOBEC3B-202ENST00000335760 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
APOBEC3B-202ENST00000335760 NLRP6P59044 892 aa19.33■□□□□ 0.69
APOBEC3B-202ENST00000335760 ZRANB1Q9UGI0 708 aa19.33■□□□□ 0.69
APOBEC3B-202ENST00000335760 KNSTRNQ9Y448 316 aa19.33■□□□□ 0.69
APOBEC3B-202ENST00000335760 COL22A1Q8NFW1 1626 aaPredicted RBP19.32■□□□□ 0.68
APOBEC3B-202ENST00000335760 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
APOBEC3B-202ENST00000335760 FYB1O15117 783 aa19.32■□□□□ 0.68
APOBEC3B-202ENST00000335760 PER1O15534 1290 aaPredicted RBP19.32■□□□□ 0.68
APOBEC3B-202ENST00000335760 NLRP13Q86W25 1043 aa19.32■□□□□ 0.68
APOBEC3B-202ENST00000335760 CGNL1Q0VF96 1302 aa19.31■□□□□ 0.68
APOBEC3B-202ENST00000335760 CABLES1Q8TDN4 633 aa19.31■□□□□ 0.68
APOBEC3B-202ENST00000335760 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
APOBEC3B-202ENST00000335760 USP31Q70CQ4 1352 aa19.29■□□□□ 0.68
APOBEC3B-202ENST00000335760 NUTM2BA6NNL0 878 aaPredicted RBP19.29■□□□□ 0.68
APOBEC3B-202ENST00000335760 NUTM2EB1AL46 878 aaPredicted RBP19.29■□□□□ 0.68
APOBEC3B-202ENST00000335760 NUTM2AQ8IVF1 878 aaPredicted RBP19.29■□□□□ 0.68
APOBEC3B-202ENST00000335760 MED1Q15648 1581 aaPredicted RBP19.28■□□□□ 0.68
APOBEC3B-202ENST00000335760 SPATA31A6Q5VVP1 1343 aa19.28■□□□□ 0.68
APOBEC3B-202ENST00000335760 MARF1Q9Y4F3 1742 aaKnown RBP19.28■□□□□ 0.68
APOBEC3B-202ENST00000335760 COG3Q96JB2 828 aa19.28■□□□□ 0.68
APOBEC3B-202ENST00000335760 USP19O94966 1318 aa19.27■□□□□ 0.68
APOBEC3B-202ENST00000335760 USP54Q70EL1 1684 aa19.27■□□□□ 0.68
APOBEC3B-202ENST00000335760 HAP1P54257 671 aaPredicted RBP19.27■□□□□ 0.68
APOBEC3B-202ENST00000335760 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.68
APOBEC3B-202ENST00000335760 CRYBG1Q9Y4K1 1723 aa19.27■□□□□ 0.67
APOBEC3B-202ENST00000335760 OVOS2A0A0J9YW53 1432 aa19.26■□□□□ 0.67
APOBEC3B-202ENST00000335760 OVOS2Q6IE36 1432 aa19.26■□□□□ 0.67
APOBEC3B-202ENST00000335760 ABCA3Q99758 1704 aa19.26■□□□□ 0.67
APOBEC3B-202ENST00000335760 PHRF1Q9P1Y6 1649 aaKnown RBP19.26■□□□□ 0.67
APOBEC3B-202ENST00000335760 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
APOBEC3B-202ENST00000335760 NSD2O96028 1365 aa19.24■□□□□ 0.67
APOBEC3B-202ENST00000335760 SLIT3O75094 1523 aa19.24■□□□□ 0.67
APOBEC3B-202ENST00000335760 SOX12O15370 315 aa19.24■□□□□ 0.67
APOBEC3B-202ENST00000335760 CC2D1BQ5T0F9 858 aaKnown RBP19.24■□□□□ 0.67
APOBEC3B-202ENST00000335760 GCP02774 474 aa19.23■□□□□ 0.67
APOBEC3B-202ENST00000335760 ANKRD26Q9UPS8 1709 aa19.23■□□□□ 0.67
APOBEC3B-202ENST00000335760 KCNH5Q8NCM2 988 aa19.22■□□□□ 0.67
APOBEC3B-202ENST00000335760 LRP6O75581 1613 aa19.21■□□□□ 0.67
APOBEC3B-202ENST00000335760 ADAMTS2O95450 1211 aa19.21■□□□□ 0.67
APOBEC3B-202ENST00000335760 NPC1L1Q9UHC9 1359 aa19.21■□□□□ 0.67
APOBEC3B-202ENST00000335760 ZC3H6P61129 1189 aaKnown RBP19.2■□□□□ 0.66
APOBEC3B-202ENST00000335760 MORC1Q86VD1 984 aa19.2■□□□□ 0.66
APOBEC3B-202ENST00000335760 MEX3CQ5U5Q3 659 aaKnown RBP19.19■□□□□ 0.66
APOBEC3B-202ENST00000335760 NFAT5O94916 1531 aa19.19■□□□□ 0.66
APOBEC3B-202ENST00000335760 ZBTB7CA1YPR0 619 aa19.19■□□□□ 0.66
APOBEC3B-202ENST00000335760 TNNT2P45379 298 aaPredicted RBP19.19■□□□□ 0.66
APOBEC3B-202ENST00000335760 FBLN1P23142 703 aa19.18■□□□□ 0.66
APOBEC3B-202ENST00000335760 KIAA0232Q92628 1395 aa19.17■□□□□ 0.66
APOBEC3B-202ENST00000335760 CPDO75976 1380 aa19.15■□□□□ 0.66
APOBEC3B-202ENST00000335760 CHRNA2Q15822 529 aa19.15■□□□□ 0.66
APOBEC3B-202ENST00000335760 ARHGEF25Q86VW2 580 aa19.15■□□□□ 0.66
APOBEC3B-202ENST00000335760 C8orf37Q96NL8 207 aa19.15■□□□□ 0.66
APOBEC3B-202ENST00000335760 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
APOBEC3B-202ENST00000335760 FAM83GA6ND36 823 aa19.14■□□□□ 0.65
APOBEC3B-202ENST00000335760 RRS1Q15050 365 aaKnown RBP19.14■□□□□ 0.65
APOBEC3B-202ENST00000335760 LTN1O94822 1766 aa19.14■□□□□ 0.65
APOBEC3B-202ENST00000335760 AATKQ6ZMQ8 1374 aa19.12■□□□□ 0.65
APOBEC3B-202ENST00000335760 MAP3K19Q56UN5 1328 aa19.12■□□□□ 0.65
APOBEC3B-202ENST00000335760 NGLY1Q96IV0 654 aa19.12■□□□□ 0.65
APOBEC3B-202ENST00000335760 COL14A1Q05707 1796 aaKnown RBP19.12■□□□□ 0.65
APOBEC3B-202ENST00000335760 MAP2P11137 1827 aaKnown RBP19.1■□□□□ 0.65
APOBEC3B-202ENST00000335760 AMPHP49418 695 aa19.09■□□□□ 0.65
APOBEC3B-202ENST00000335760 POLKQ9UBT6 870 aa19.09■□□□□ 0.65
APOBEC3B-202ENST00000335760 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
APOBEC3B-202ENST00000335760 COL18A1P39060 1754 aa19.09■□□□□ 0.65
APOBEC3B-202ENST00000335760 PARD3Q8TEW0 1356 aa19.09■□□□□ 0.65
APOBEC3B-202ENST00000335760 PLCH1Q4KWH8 1693 aa19.09■□□□□ 0.65
APOBEC3B-202ENST00000335760 PPM1GO15355 546 aaPredicted RBP19.08■□□□□ 0.65
APOBEC3B-202ENST00000335760 BTG4Q9NY30 223 aa19.08■□□□□ 0.65
APOBEC3B-202ENST00000335760 RALBP1Q15311 655 aa19.07■□□□□ 0.64
APOBEC3B-202ENST00000335760 AXIN2Q9Y2T1 843 aa19.07■□□□□ 0.64
APOBEC3B-202ENST00000335760 LMO7Q8WWI1 1683 aa19.07■□□□□ 0.64
APOBEC3B-202ENST00000335760 AFF2P51816 1311 aa19.07■□□□□ 0.64
APOBEC3B-202ENST00000335760 PEAK1Q9H792 1746 aa19.07■□□□□ 0.64
APOBEC3B-202ENST00000335760 HOXC9P31274 260 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms