RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CGNL1Q0VF96 1302 aa29.4■■■□□ 2.3
TPM1-204ENST00000334895 FOXO3O43524 673 aa29.4■■■□□ 2.3
TPM1-204ENST00000334895 NHSL1Q5SYE7 1610 aa29.4■■■□□ 2.3
TPM1-204ENST00000334895 ANP32CO43423 234 aa29.39■■■□□ 2.3
TPM1-204ENST00000334895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.39■■■□□ 2.3
TPM1-204ENST00000334895 MIER1Q8N108 512 aa29.39■■■□□ 2.3
TPM1-204ENST00000334895 PRKRIP1Q9H875 184 aaPredicted RBP29.39■■■□□ 2.3
TPM1-204ENST00000334895 TTC21BQ7Z4L5 1316 aa29.38■■■□□ 2.29
TPM1-204ENST00000334895 FYB1O15117 783 aa29.37■■■□□ 2.29
TPM1-204ENST00000334895 PARD3Q8TEW0 1356 aa29.36■■■□□ 2.29
TPM1-204ENST00000334895 TRPM3Q9HCF6 1732 aaPredicted RBP29.36■■■□□ 2.29
TPM1-204ENST00000334895 HSPA1LP34931 641 aa29.36■■■□□ 2.29
TPM1-204ENST00000334895 ANKRD26Q9UPS8 1709 aa29.36■■■□□ 2.29
TPM1-204ENST00000334895 DDX17Q92841 729 aaKnown RBP29.35■■■□□ 2.29
TPM1-204ENST00000334895 NSD2O96028 1365 aa29.35■■■□□ 2.29
TPM1-204ENST00000334895 AHDC1Q5TGY3 1603 aaPredicted RBP29.35■■■□□ 2.29
TPM1-204ENST00000334895 XPCQ01831 940 aaPredicted RBP29.34■■■□□ 2.29
TPM1-204ENST00000334895 PSME1Q06323 249 aa29.34■■■□□ 2.29
TPM1-204ENST00000334895 NME9Q86XW9 330 aa29.34■■■□□ 2.29
TPM1-204ENST00000334895 PIK3C2AO00443 1686 aa29.33■■■□□ 2.29
TPM1-204ENST00000334895 GGNBP2Q9H3C7 697 aa29.33■■■□□ 2.29
TPM1-204ENST00000334895 BRD4O60885 1362 aaPredicted RBP29.33■■■□□ 2.29
TPM1-204ENST00000334895 PXDNQ92626 1479 aa29.32■■■□□ 2.28
TPM1-204ENST00000334895 COL16A1Q07092 1604 aaPredicted RBP29.32■■■□□ 2.28
TPM1-204ENST00000334895 NPHP3Q7Z494 1330 aa29.31■■■□□ 2.28
TPM1-204ENST00000334895 TTC21AQ8NDW8 1320 aa29.31■■■□□ 2.28
TPM1-204ENST00000334895 KRT28Q7Z3Y7 464 aa29.31■■■□□ 2.28
TPM1-204ENST00000334895 ZRANB1Q9UGI0 708 aa29.31■■■□□ 2.28
TPM1-204ENST00000334895 RALBP1Q15311 655 aa29.29■■■□□ 2.28
TPM1-204ENST00000334895 MARF1Q9Y4F3 1742 aaKnown RBP29.27■■■□□ 2.28
TPM1-204ENST00000334895 OVOS2A0A0J9YW53 1432 aa29.27■■■□□ 2.28
TPM1-204ENST00000334895 OVOS2Q6IE36 1432 aa29.27■■■□□ 2.28
TPM1-204ENST00000334895 USP54Q70EL1 1684 aa29.26■■■□□ 2.27
TPM1-204ENST00000334895 ALS2Q96Q42 1657 aa29.25■■■□□ 2.27
TPM1-204ENST00000334895 PAK3O75914 559 aaPredicted RBP29.25■■■□□ 2.27
TPM1-204ENST00000334895 MORC1Q86VD1 984 aa29.24■■■□□ 2.27
TPM1-204ENST00000334895 SOS2Q07890 1332 aaPredicted RBP29.24■■■□□ 2.27
TPM1-204ENST00000334895 USP31Q70CQ4 1352 aa29.24■■■□□ 2.27
TPM1-204ENST00000334895 SBNO1A3KN83 1393 aa29.23■■■□□ 2.27
TPM1-204ENST00000334895 MYBBP1AQ9BQG0 1328 aaKnown RBP29.2■■■□□ 2.27
TPM1-204ENST00000334895 ABTB2Q8N961 1025 aa29.2■■■□□ 2.27
TPM1-204ENST00000334895 COG3Q96JB2 828 aa29.2■■■□□ 2.26
TPM1-204ENST00000334895 TNS3Q68CZ2 1445 aa29.19■■■□□ 2.26
TPM1-204ENST00000334895 NUTM2GQ5VZR2 741 aa29.19■■■□□ 2.26
TPM1-204ENST00000334895 PPP2R1AP30153 589 aa29.18■■■□□ 2.26
TPM1-204ENST00000334895 TNNT2P45379 298 aaPredicted RBP29.18■■■□□ 2.26
TPM1-204ENST00000334895 SPATA31A3Q5VYP0 1347 aa29.17■■■□□ 2.26
TPM1-204ENST00000334895 NLRP6P59044 892 aa29.16■■■□□ 2.26
TPM1-204ENST00000334895 SHPRHQ149N8 1683 aa29.15■■■□□ 2.26
TPM1-204ENST00000334895 CCDC184Q52MB2 194 aa29.15■■■□□ 2.26
TPM1-204ENST00000334895 CCER2I3L3R5 266 aa29.13■■■□□ 2.25
TPM1-204ENST00000334895 FBLN1P23142 703 aa29.13■■■□□ 2.25
TPM1-204ENST00000334895 LMOD2Q6P5Q4 547 aa29.12■■■□□ 2.25
TPM1-204ENST00000334895 MED1Q15648 1581 aaPredicted RBP29.11■■■□□ 2.25
TPM1-204ENST00000334895 NLRP13Q86W25 1043 aa29.11■■■□□ 2.25
TPM1-204ENST00000334895 AATKQ6ZMQ8 1374 aa29.1■■■□□ 2.25
TPM1-204ENST00000334895 SLIT3O75094 1523 aa29.1■■■□□ 2.25
TPM1-204ENST00000334895 USP19O94966 1318 aa29.1■■■□□ 2.25
TPM1-204ENST00000334895 CRYBG1Q9Y4K1 1723 aa29.1■■■□□ 2.25
TPM1-204ENST00000334895 MAP2P11137 1827 aaKnown RBP29.09■■■□□ 2.25
TPM1-204ENST00000334895 ARHGEF10O15013 1369 aa29.09■■■□□ 2.25
TPM1-204ENST00000334895 JCADQ9P266 1359 aa29.08■■■□□ 2.25
TPM1-204ENST00000334895 LRRC59Q96AG4 307 aaKnown RBP29.08■■■□□ 2.25
TPM1-204ENST00000334895 NFAT5O94916 1531 aa29.07■■■□□ 2.24
TPM1-204ENST00000334895 PHRF1Q9P1Y6 1649 aaKnown RBP29.05■■■□□ 2.24
TPM1-204ENST00000334895 SOX12O15370 315 aa29.05■■■□□ 2.24
TPM1-204ENST00000334895 POLKQ9UBT6 870 aa29.05■■■□□ 2.24
TPM1-204ENST00000334895 SMG6Q86US8 1419 aaKnown RBP29.04■■■□□ 2.24
TPM1-204ENST00000334895 MTHFSP49914 203 aa29.04■■■□□ 2.24
TPM1-204ENST00000334895 RRS1Q15050 365 aaKnown RBP29.03■■■□□ 2.24
TPM1-204ENST00000334895 MRS2Q9HD23 443 aa29.03■■■□□ 2.24
TPM1-204ENST00000334895 PNPLA6Q8IY17 1366 aa29.03■■■□□ 2.24
TPM1-204ENST00000334895 COL22A1Q8NFW1 1626 aaPredicted RBP29.03■■■□□ 2.24
TPM1-204ENST00000334895 PLEKHG5O94827 1062 aa29.02■■■□□ 2.24
TPM1-204ENST00000334895 EMILIN1Q9Y6C2 1016 aa29.02■■■□□ 2.24
TPM1-204ENST00000334895 PEAK1Q9H792 1746 aa29.01■■■□□ 2.24
TPM1-204ENST00000334895 ABCA3Q99758 1704 aa29.01■■■□□ 2.23
TPM1-204ENST00000334895 GCP02774 474 aa29■■■□□ 2.23
TPM1-204ENST00000334895 CABLES1Q8TDN4 633 aa29■■■□□ 2.23
TPM1-204ENST00000334895 MAP3K19Q56UN5 1328 aa28.98■■■□□ 2.23
TPM1-204ENST00000334895 KCNH5Q8NCM2 988 aa28.98■■■□□ 2.23
TPM1-204ENST00000334895 LTN1O94822 1766 aa28.98■■■□□ 2.23
TPM1-204ENST00000334895 COL3A1P02461 1466 aaPredicted RBP28.97■■■□□ 2.23
TPM1-204ENST00000334895 CDK12Q9NYV4 1490 aaPredicted RBP28.97■■■□□ 2.23
TPM1-204ENST00000334895 LRP6O75581 1613 aa28.95■■■□□ 2.22
TPM1-204ENST00000334895 INSRP06213 1382 aa28.93■■■□□ 2.22
TPM1-204ENST00000334895 SPATA31A6Q5VVP1 1343 aa28.93■■■□□ 2.22
TPM1-204ENST00000334895 PPM1GO15355 546 aaPredicted RBP28.93■■■□□ 2.22
TPM1-204ENST00000334895 PNISRQ8TF01 805 aaKnown RBP28.91■■■□□ 2.22
TPM1-204ENST00000334895 ARHGEF25Q86VW2 580 aa28.91■■■□□ 2.22
TPM1-204ENST00000334895 NUTM2BA6NNL0 878 aaPredicted RBP28.9■■■□□ 2.22
TPM1-204ENST00000334895 NUTM2EB1AL46 878 aaPredicted RBP28.9■■■□□ 2.22
TPM1-204ENST00000334895 NUTM2AQ8IVF1 878 aaPredicted RBP28.9■■■□□ 2.22
TPM1-204ENST00000334895 CFAP53Q96M91 514 aa28.89■■■□□ 2.22
TPM1-204ENST00000334895 FLT4P35916 1363 aa28.88■■■□□ 2.21
TPM1-204ENST00000334895 KIF24Q5T7B8 1368 aa28.88■■■□□ 2.21
TPM1-204ENST00000334895 ZC3H6P61129 1189 aaKnown RBP28.88■■■□□ 2.21
TPM1-204ENST00000334895 RTL1A6NKG5 1358 aa28.87■■■□□ 2.21
TPM1-204ENST00000334895 CPDO75976 1380 aa28.86■■■□□ 2.21
TPM1-204ENST00000334895 HOXC9P31274 260 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms