RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 GGT6Q6P531 493 aa20.42■□□□□ 0.86
UPK3B-202ENST00000334348 GAS2L3Q86XJ1 694 aa20.42■□□□□ 0.86
UPK3B-202ENST00000334348 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
UPK3B-202ENST00000334348 NSD3Q9BZ95 1437 aa20.41■□□□□ 0.86
UPK3B-202ENST00000334348 MYOM2P54296 1465 aa20.4■□□□□ 0.86
UPK3B-202ENST00000334348 RAB3GAP1Q15042 981 aa20.39■□□□□ 0.86
UPK3B-202ENST00000334348 DDX19BQ9UMR2 479 aa20.39■□□□□ 0.86
UPK3B-202ENST00000334348 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
UPK3B-202ENST00000334348 TNNT2P45379 298 aaPredicted RBP20.37■□□□□ 0.85
UPK3B-202ENST00000334348 MYO3AQ8NEV4 1616 aa20.37■□□□□ 0.85
UPK3B-202ENST00000334348 TRIM27P14373 513 aa20.36■□□□□ 0.85
UPK3B-202ENST00000334348 MTHFSP49914 203 aa20.36■□□□□ 0.85
UPK3B-202ENST00000334348 ADGRF5Q8IZF2 1346 aa20.35■□□□□ 0.85
UPK3B-202ENST00000334348 HSP90AB1P08238 724 aaKnown RBP20.35■□□□□ 0.85
UPK3B-202ENST00000334348 SMC4Q9NTJ3 1288 aa20.35■□□□□ 0.85
UPK3B-202ENST00000334348 CCDC173Q0VFZ6 552 aa20.34■□□□□ 0.85
UPK3B-202ENST00000334348 ITPRIPQ8IWB1 547 aa20.34■□□□□ 0.85
UPK3B-202ENST00000334348 TET3O43151 1660 aa20.34■□□□□ 0.85
UPK3B-202ENST00000334348 DEPDC5O75140 1603 aa20.34■□□□□ 0.85
UPK3B-202ENST00000334348 ATF7IPQ6VMQ6 1270 aa20.34■□□□□ 0.85
UPK3B-202ENST00000334348 PPP1R9BQ96SB3 815 aa20.34■□□□□ 0.85
UPK3B-202ENST00000334348 NUCB1Q02818 461 aa20.32■□□□□ 0.84
UPK3B-202ENST00000334348 PDCL3Q9H2J4 239 aa20.32■□□□□ 0.84
UPK3B-202ENST00000334348 SLC12A5Q9H2X9 1139 aa20.31■□□□□ 0.84
UPK3B-202ENST00000334348 ZBTB40Q9NUA8 1239 aa20.31■□□□□ 0.84
UPK3B-202ENST00000334348 SSH1Q8WYL5 1049 aa20.31■□□□□ 0.84
UPK3B-202ENST00000334348 ADGRB2O60241 1585 aa20.31■□□□□ 0.84
UPK3B-202ENST00000334348 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
UPK3B-202ENST00000334348 TSR2Q969E8 191 aaKnown RBP20.3■□□□□ 0.84
UPK3B-202ENST00000334348 USP32Q8NFA0 1604 aa20.3■□□□□ 0.84
UPK3B-202ENST00000334348 KIF2CQ99661 725 aa20.3■□□□□ 0.84
UPK3B-202ENST00000334348 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
UPK3B-202ENST00000334348 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
UPK3B-202ENST00000334348 CLEC17AQ6ZS10 378 aa20.29■□□□□ 0.84
UPK3B-202ENST00000334348 IBTKQ9P2D0 1353 aaPredicted RBP20.29■□□□□ 0.84
UPK3B-202ENST00000334348 NRXN1Q9ULB1 1477 aa20.29■□□□□ 0.84
UPK3B-202ENST00000334348 ZSCAN30Q86W11 494 aa20.29■□□□□ 0.84
UPK3B-202ENST00000334348 VWDEQ8N2E2 1590 aa20.28■□□□□ 0.84
UPK3B-202ENST00000334348 BMP2KLQ5H9B9 411 aa20.28■□□□□ 0.84
UPK3B-202ENST00000334348 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
UPK3B-202ENST00000334348 KIAA1211Q6ZU35 1233 aa20.28■□□□□ 0.84
UPK3B-202ENST00000334348 NOB1Q9ULX3 412 aaKnown RBP20.28■□□□□ 0.84
UPK3B-202ENST00000334348 MROH1Q8NDA8 1641 aa20.28■□□□□ 0.84
UPK3B-202ENST00000334348 NASPP49321 788 aaPredicted RBP20.28■□□□□ 0.84
UPK3B-202ENST00000334348 TMEM57Q8N5G2 664 aa20.28■□□□□ 0.84
UPK3B-202ENST00000334348 CHD1LQ86WJ1 897 aa20.27■□□□□ 0.84
UPK3B-202ENST00000334348 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.83
UPK3B-202ENST00000334348 GOLGA6L22H0YM25 854 aa20.26■□□□□ 0.83
UPK3B-202ENST00000334348 OFD1O75665 1012 aa20.26■□□□□ 0.83
UPK3B-202ENST00000334348 REREQ9P2R6 1566 aa20.26■□□□□ 0.83
UPK3B-202ENST00000334348 NOS1P29475 1434 aa20.26■□□□□ 0.83
UPK3B-202ENST00000334348 TERF1P54274 439 aa20.26■□□□□ 0.83
UPK3B-202ENST00000334348 ANP32BQ92688 251 aaKnown RBP20.26■□□□□ 0.83
UPK3B-202ENST00000334348 LNPKQ9C0E8 428 aa20.26■□□□□ 0.83
UPK3B-202ENST00000334348 KLHL40Q2TBA0 621 aa20.25■□□□□ 0.83
UPK3B-202ENST00000334348 SETBP1Q9Y6X0 1596 aa20.24■□□□□ 0.83
UPK3B-202ENST00000334348 ABCC11Q96J66 1382 aa20.24■□□□□ 0.83
UPK3B-202ENST00000334348 IL16Q14005 1332 aa20.24■□□□□ 0.83
UPK3B-202ENST00000334348 KIF16BQ96L93 1317 aa20.24■□□□□ 0.83
UPK3B-202ENST00000334348 IPO8O15397 1037 aaKnown RBP20.24■□□□□ 0.83
UPK3B-202ENST00000334348 CD2BP2O95400 341 aaKnown RBP20.24■□□□□ 0.83
UPK3B-202ENST00000334348 NSD2O96028 1365 aa20.24■□□□□ 0.83
UPK3B-202ENST00000334348 AGLP35573 1532 aa20.23■□□□□ 0.83
UPK3B-202ENST00000334348 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
UPK3B-202ENST00000334348 IFT172Q9UG01 1749 aa20.22■□□□□ 0.83
UPK3B-202ENST00000334348 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
UPK3B-202ENST00000334348 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.22■□□□□ 0.83
UPK3B-202ENST00000334348 PLEKHF1Q96S99 279 aa20.22■□□□□ 0.83
UPK3B-202ENST00000334348 ARHGAP31Q2M1Z3 1444 aa20.22■□□□□ 0.83
UPK3B-202ENST00000334348 SSFA2P28290 1259 aa20.22■□□□□ 0.83
UPK3B-202ENST00000334348 UGGT1Q9NYU2 1555 aa20.22■□□□□ 0.83
UPK3B-202ENST00000334348 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
UPK3B-202ENST00000334348 MSNP26038 577 aaKnown RBP20.21■□□□□ 0.83
UPK3B-202ENST00000334348 CEBPAP49715 358 aaPredicted RBP20.21■□□□□ 0.83
UPK3B-202ENST00000334348 HS1BP3Q53T59 392 aa20.21■□□□□ 0.83
UPK3B-202ENST00000334348 TRAK1Q9UPV9 953 aa20.21■□□□□ 0.83
UPK3B-202ENST00000334348 DDX49Q9Y6V7 483 aaKnown RBP20.2■□□□□ 0.82
UPK3B-202ENST00000334348 BAG4O95429 457 aaKnown RBP20.2■□□□□ 0.82
UPK3B-202ENST00000334348 GAS2L2Q8NHY3 880 aa20.2■□□□□ 0.82
UPK3B-202ENST00000334348 ZNF445P59923 1031 aa20.19■□□□□ 0.82
UPK3B-202ENST00000334348 PUS7Q96PZ0 661 aaKnown RBP20.19■□□□□ 0.82
UPK3B-202ENST00000334348 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
UPK3B-202ENST00000334348 KIF1BO60333 1816 aa20.18■□□□□ 0.82
UPK3B-202ENST00000334348 ALDH1L2Q3SY69 923 aa20.18■□□□□ 0.82
UPK3B-202ENST00000334348 TBC1D9Q6ZT07 1266 aa20.18■□□□□ 0.82
UPK3B-202ENST00000334348 GCC1Q96CN9 775 aa20.18■□□□□ 0.82
UPK3B-202ENST00000334348 ANKRD36BQ8N2N9 1353 aa20.17■□□□□ 0.82
UPK3B-202ENST00000334348 KDM4FA0A1W2PPD8 638 aa20.17■□□□□ 0.82
UPK3B-202ENST00000334348 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
UPK3B-202ENST00000334348 QRICH2Q9H0J4 1663 aa20.17■□□□□ 0.82
UPK3B-202ENST00000334348 CFAP65Q6ZU64 1925 aaKnown RBP20.16■□□□□ 0.82
UPK3B-202ENST00000334348 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
UPK3B-202ENST00000334348 ANKRD45Q5TZF3 282 aa20.16■□□□□ 0.82
UPK3B-202ENST00000334348 FBXO31Q5XUX0 539 aaPredicted RBP20.16■□□□□ 0.82
UPK3B-202ENST00000334348 RIPK4P57078 832 aa20.15■□□□□ 0.82
UPK3B-202ENST00000334348 EFCAB6Q5THR3 1501 aa20.15■□□□□ 0.82
UPK3B-202ENST00000334348 CLTCQ00610 1675 aaKnown RBP20.15■□□□□ 0.82
UPK3B-202ENST00000334348 ABCC3O15438 1527 aa20.14■□□□□ 0.82
UPK3B-202ENST00000334348 BRPF1P55201 1214 aaPredicted RBP20.14■□□□□ 0.82
UPK3B-202ENST00000334348 ESF1Q9H501 851 aaKnown RBP20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms