RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 CFAP74Q9C0B2 1584 aa11.58□□□□□ -0.55
COPB2-201ENST00000333188 ADGRB3O60242 1522 aa11.58□□□□□ -0.56
COPB2-201ENST00000333188 RLBP1P12271 317 aa11.58□□□□□ -0.56
COPB2-201ENST00000333188 SYNMO15061 1565 aa11.58□□□□□ -0.56
COPB2-201ENST00000333188 TMEM2Q9UHN6 1383 aa11.58□□□□□ -0.56
COPB2-201ENST00000333188 VWDEQ8N2E2 1590 aa11.58□□□□□ -0.56
COPB2-201ENST00000333188 PROSER2Q86WR7 435 aaPredicted RBP11.57□□□□□ -0.56
COPB2-201ENST00000333188 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
COPB2-201ENST00000333188 A2ML1A8K2U0 1454 aa11.57□□□□□ -0.56
COPB2-201ENST00000333188 RARSP54136 660 aaKnown RBP11.56□□□□□ -0.56
COPB2-201ENST00000333188 NOB1Q9ULX3 412 aaKnown RBP11.56□□□□□ -0.56
COPB2-201ENST00000333188 PDE4AP27815 886 aa11.56□□□□□ -0.56
COPB2-201ENST00000333188 CAMSAP1Q5T5Y3 1602 aa11.56□□□□□ -0.56
COPB2-201ENST00000333188 SSH1Q8WYL5 1049 aa11.56□□□□□ -0.56
COPB2-201ENST00000333188 RTF1Q92541 710 aaKnown RBP11.56□□□□□ -0.56
COPB2-201ENST00000333188 DEPDC5O75140 1603 aa11.56□□□□□ -0.56
COPB2-201ENST00000333188 ZC3H6P61129 1189 aaKnown RBP11.56□□□□□ -0.56
COPB2-201ENST00000333188 FANCIQ9NVI1 1328 aa11.55□□□□□ -0.56
COPB2-201ENST00000333188 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
COPB2-201ENST00000333188 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
COPB2-201ENST00000333188 MSH5O43196 834 aa11.55□□□□□ -0.56
COPB2-201ENST00000333188 TSPYL6Q8N831 410 aa11.55□□□□□ -0.56
COPB2-201ENST00000333188 TTC21BQ7Z4L5 1316 aa11.55□□□□□ -0.56
COPB2-201ENST00000333188 IGHDP01880 384 aa11.54□□□□□ -0.56
COPB2-201ENST00000333188 ORAI2Q96SN7 254 aa11.54□□□□□ -0.56
COPB2-201ENST00000333188 SIGLEC1Q9BZZ2 1709 aa11.54□□□□□ -0.56
COPB2-201ENST00000333188 CLTCQ00610 1675 aaKnown RBP11.54□□□□□ -0.56
COPB2-201ENST00000333188 ARHGAP31Q2M1Z3 1444 aa11.54□□□□□ -0.56
COPB2-201ENST00000333188 ZKSCAN2Q63HK3 967 aa11.53□□□□□ -0.56
COPB2-201ENST00000333188 SPRYD3Q8NCJ5 442 aa11.53□□□□□ -0.56
COPB2-201ENST00000333188 POLR3AO14802 1390 aaPredicted RBP11.53□□□□□ -0.56
COPB2-201ENST00000333188 LMTK2Q8IWU2 1503 aa11.53□□□□□ -0.56
COPB2-201ENST00000333188 KDM5AP29375 1690 aaKnown RBP11.53□□□□□ -0.56
COPB2-201ENST00000333188 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
COPB2-201ENST00000333188 PNNQ9H307 717 aaKnown RBP11.53□□□□□ -0.56
COPB2-201ENST00000333188 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
COPB2-201ENST00000333188 GLI2P10070 1586 aa11.53□□□□□ -0.56
COPB2-201ENST00000333188 NEXMIFQ5QGS0 1516 aa11.53□□□□□ -0.56
COPB2-201ENST00000333188 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
COPB2-201ENST00000333188 PIK3C2BO00750 1634 aa11.52□□□□□ -0.56
COPB2-201ENST00000333188 EIF4A2Q14240 407 aaKnown RBP11.52□□□□□ -0.56
COPB2-201ENST00000333188 EIF2S2P20042 333 aaKnown RBP11.52□□□□□ -0.57
COPB2-201ENST00000333188 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
COPB2-201ENST00000333188 SBNO2Q9Y2G9 1366 aa11.52□□□□□ -0.57
COPB2-201ENST00000333188 TULP4Q9NRJ4 1543 aa11.52□□□□□ -0.57
COPB2-201ENST00000333188 CSB-PGBD3P0DP91 1061 aa11.51□□□□□ -0.57
COPB2-201ENST00000333188 BLMP54132 1417 aaPredicted RBP11.51□□□□□ -0.57
COPB2-201ENST00000333188 RICTORQ6R327 1708 aa11.51□□□□□ -0.57
COPB2-201ENST00000333188 ADGRB1O14514 1584 aa11.51□□□□□ -0.57
COPB2-201ENST00000333188 FCHSD2O94868 740 aa11.51□□□□□ -0.57
COPB2-201ENST00000333188 ABCC11Q96J66 1382 aa11.51□□□□□ -0.57
COPB2-201ENST00000333188 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
COPB2-201ENST00000333188 ALKQ9UM73 1620 aa11.5□□□□□ -0.57
COPB2-201ENST00000333188 WDR63Q8IWG1 891 aa11.5□□□□□ -0.57
COPB2-201ENST00000333188 ZNF521Q96K83 1311 aa11.5□□□□□ -0.57
COPB2-201ENST00000333188 NFE2L2Q16236 605 aa11.5□□□□□ -0.57
COPB2-201ENST00000333188 TMEM57Q8N5G2 664 aa11.5□□□□□ -0.57
COPB2-201ENST00000333188 LRRC59Q96AG4 307 aaKnown RBP11.5□□□□□ -0.57
COPB2-201ENST00000333188 PHF8Q9UPP1 1060 aa11.5□□□□□ -0.57
COPB2-201ENST00000333188 PCDHB15Q9Y5E8 787 aa11.5□□□□□ -0.57
COPB2-201ENST00000333188 NKTRP30414 1462 aaKnown RBP11.49□□□□□ -0.57
COPB2-201ENST00000333188 TRIM27P14373 513 aa11.49□□□□□ -0.57
COPB2-201ENST00000333188 TWISTNBQ3B726 338 aaPredicted RBP11.49□□□□□ -0.57
COPB2-201ENST00000333188 ARXQ96QS3 562 aa11.49□□□□□ -0.57
COPB2-201ENST00000333188 MAP3K19Q56UN5 1328 aa11.49□□□□□ -0.57
COPB2-201ENST00000333188 RNF123Q5XPI4 1314 aa11.49□□□□□ -0.57
COPB2-201ENST00000333188 C8orf58Q8NAV2 365 aa11.49□□□□□ -0.57
COPB2-201ENST00000333188 RSPH6AQ9H0K4 717 aa11.49□□□□□ -0.57
COPB2-201ENST00000333188 MYO5BQ9ULV0 1848 aa11.49□□□□□ -0.57
COPB2-201ENST00000333188 MBIPQ9NS73 344 aa11.48□□□□□ -0.57
COPB2-201ENST00000333188 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
COPB2-201ENST00000333188 IQGAP1P46940 1657 aa11.48□□□□□ -0.57
COPB2-201ENST00000333188 CENPQQ7L2Z9 268 aaPredicted RBP11.48□□□□□ -0.57
COPB2-201ENST00000333188 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
COPB2-201ENST00000333188 LNPKQ9C0E8 428 aa11.48□□□□□ -0.57
COPB2-201ENST00000333188 TSPYL4Q9UJ04 414 aa11.48□□□□□ -0.57
COPB2-201ENST00000333188 IL13P35225 146 aa11.48□□□□□ -0.57
COPB2-201ENST00000333188 PTPRMP28827 1452 aa11.48□□□□□ -0.57
COPB2-201ENST00000333188 QRICH2Q9H0J4 1663 aa11.47□□□□□ -0.57
COPB2-201ENST00000333188 TBX22Q9Y458 520 aa11.47□□□□□ -0.57
COPB2-201ENST00000333188 CHRNA2Q15822 529 aa11.47□□□□□ -0.57
COPB2-201ENST00000333188 PLEKHF1Q96S99 279 aa11.47□□□□□ -0.57
COPB2-201ENST00000333188 NRXN1Q9ULB1 1477 aa11.47□□□□□ -0.57
COPB2-201ENST00000333188 POLR1AO95602 1720 aaPredicted RBP11.47□□□□□ -0.57
COPB2-201ENST00000333188 F6X3S4 739 aa11.46□□□□□ -0.57
COPB2-201ENST00000333188 ANP32EQ9BTT0 268 aa11.46□□□□□ -0.57
COPB2-201ENST00000333188 NOP58Q9Y2X3 529 aaKnown RBP11.46□□□□□ -0.57
COPB2-201ENST00000333188 ATF3P18847 181 aa11.46□□□□□ -0.58
COPB2-201ENST00000333188 NLRP2Q9NX02 1062 aa11.46□□□□□ -0.58
COPB2-201ENST00000333188 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
COPB2-201ENST00000333188 ATF7IPQ6VMQ6 1270 aa11.45□□□□□ -0.58
COPB2-201ENST00000333188 EYA1Q99502 592 aa11.45□□□□□ -0.58
COPB2-201ENST00000333188 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
COPB2-201ENST00000333188 ANXA1P04083 346 aa11.45□□□□□ -0.58
COPB2-201ENST00000333188 ANKRD45Q5TZF3 282 aa11.45□□□□□ -0.58
COPB2-201ENST00000333188 PREX1Q8TCU6 1659 aa11.45□□□□□ -0.58
COPB2-201ENST00000333188 GNAI1P63096 354 aa11.45□□□□□ -0.58
COPB2-201ENST00000333188 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
COPB2-201ENST00000333188 MTHFSDQ2M296 383 aaKnown RBP11.44□□□□□ -0.58
COPB2-201ENST00000333188 RWDD1Q9H446 243 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms