RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MS4A1P11836 297 aa22.57■■□□□ 1.2
DDX28-201ENST00000332395 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
DDX28-201ENST00000332395 DIAPH1O60610 1272 aaKnown RBP22.57■■□□□ 1.2
DDX28-201ENST00000332395 ADAMTS13Q76LX8 1427 aa22.56■■□□□ 1.2
DDX28-201ENST00000332395 CENPQQ7L2Z9 268 aaPredicted RBP22.56■■□□□ 1.2
DDX28-201ENST00000332395 PDE3AQ14432 1141 aa22.55■■□□□ 1.2
DDX28-201ENST00000332395 NUDT16Q96DE0 195 aaKnown RBP22.55■■□□□ 1.2
DDX28-201ENST00000332395 MYH16Q9H6N6 1097 aa22.55■■□□□ 1.2
DDX28-201ENST00000332395 MAPK8IP3Q9UPT6 1336 aa22.55■■□□□ 1.2
DDX28-201ENST00000332395 CDC42BPGQ6DT37 1551 aa22.55■■□□□ 1.2
DDX28-201ENST00000332395 RARSP54136 660 aaKnown RBP22.54■■□□□ 1.2
DDX28-201ENST00000332395 TMPOP42166 694 aaKnown RBP22.53■■□□□ 1.2
DDX28-201ENST00000332395 PLEKHG1Q9ULL1 1385 aa22.53■■□□□ 1.2
DDX28-201ENST00000332395 CANXP27824 592 aaKnown RBP22.53■■□□□ 1.2
DDX28-201ENST00000332395 CCDC61Q9Y6R9 512 aa22.53■■□□□ 1.2
DDX28-201ENST00000332395 ROBO2Q9HCK4 1378 aa22.53■■□□□ 1.2
DDX28-201ENST00000332395 CEBPAP49715 358 aaPredicted RBP22.52■■□□□ 1.2
DDX28-201ENST00000332395 POLKQ9UBT6 870 aa22.52■■□□□ 1.2
DDX28-201ENST00000332395 MON2Q7Z3U7 1717 aa22.52■■□□□ 1.2
DDX28-201ENST00000332395 LTKP29376 864 aa22.52■■□□□ 1.2
DDX28-201ENST00000332395 PDE4AP27815 886 aa22.51■■□□□ 1.19
DDX28-201ENST00000332395 SKAP1Q86WV1 359 aa22.51■■□□□ 1.19
DDX28-201ENST00000332395 C3P01024 1663 aa22.5■■□□□ 1.19
DDX28-201ENST00000332395 NCKAP5LQ9HCH0 1330 aa22.5■■□□□ 1.19
DDX28-201ENST00000332395 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
DDX28-201ENST00000332395 FBLN1P23142 703 aa22.5■■□□□ 1.19
DDX28-201ENST00000332395 PNNQ9H307 717 aaKnown RBP22.5■■□□□ 1.19
DDX28-201ENST00000332395 TRIM35Q9UPQ4 493 aa22.5■■□□□ 1.19
DDX28-201ENST00000332395 ANP32AP39687 249 aaKnown RBP22.49■■□□□ 1.19
DDX28-201ENST00000332395 NME9Q86XW9 330 aa22.49■■□□□ 1.19
DDX28-201ENST00000332395 AKAP12Q02952 1782 aa22.49■■□□□ 1.19
DDX28-201ENST00000332395 PPM1GO15355 546 aaPredicted RBP22.49■■□□□ 1.19
DDX28-201ENST00000332395 FRAT1Q92837 279 aaPredicted RBP22.49■■□□□ 1.19
DDX28-201ENST00000332395 BACH2Q9BYV9 841 aa22.49■■□□□ 1.19
DDX28-201ENST00000332395 ITSN1Q15811 1721 aa22.48■■□□□ 1.19
DDX28-201ENST00000332395 PANK1Q8TE04 598 aa22.48■■□□□ 1.19
DDX28-201ENST00000332395 LRRC7Q96NW7 1537 aa22.48■■□□□ 1.19
DDX28-201ENST00000332395 PRR36Q9H6K5 1346 aa22.47■■□□□ 1.19
DDX28-201ENST00000332395 FCHSD2O94868 740 aa22.46■■□□□ 1.19
DDX28-201ENST00000332395 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.46■■□□□ 1.19
DDX28-201ENST00000332395 COG6Q9Y2V7 657 aa22.46■■□□□ 1.19
DDX28-201ENST00000332395 FER1L4A9Z1Z3 1794 aa22.46■■□□□ 1.19
DDX28-201ENST00000332395 RIPK4P57078 832 aa22.45■■□□□ 1.18
DDX28-201ENST00000332395 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
DDX28-201ENST00000332395 SLIT1O75093 1534 aa22.45■■□□□ 1.18
DDX28-201ENST00000332395 TSR2Q969E8 191 aaKnown RBP22.45■■□□□ 1.18
DDX28-201ENST00000332395 BCL2L13Q9BXK5 485 aa22.45■■□□□ 1.18
DDX28-201ENST00000332395 ZRANB1Q9UGI0 708 aa22.45■■□□□ 1.18
DDX28-201ENST00000332395 EID1Q9Y6B2 187 aa22.45■■□□□ 1.18
DDX28-201ENST00000332395 EMILIN1Q9Y6C2 1016 aa22.45■■□□□ 1.18
DDX28-201ENST00000332395 CT47B1P0C2W7 299 aaPredicted RBP22.44■■□□□ 1.18
DDX28-201ENST00000332395 ZNF692Q9BU19 519 aaPredicted RBP22.44■■□□□ 1.18
DDX28-201ENST00000332395 IL16Q14005 1332 aa22.44■■□□□ 1.18
DDX28-201ENST00000332395 CDK12Q9NYV4 1490 aaPredicted RBP22.44■■□□□ 1.18
DDX28-201ENST00000332395 COG3Q96JB2 828 aa22.43■■□□□ 1.18
DDX28-201ENST00000332395 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
DDX28-201ENST00000332395 ARHGAP23Q9P227 1491 aa22.43■■□□□ 1.18
DDX28-201ENST00000332395 CLUAP1Q96AJ1 413 aa22.43■■□□□ 1.18
DDX28-201ENST00000332395 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
DDX28-201ENST00000332395 PTPRUQ92729 1446 aa22.42■■□□□ 1.18
DDX28-201ENST00000332395 PRKAR2BP31323 418 aa22.42■■□□□ 1.18
DDX28-201ENST00000332395 TOPAZ1Q8N9V7 1692 aa22.41■■□□□ 1.18
DDX28-201ENST00000332395 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
DDX28-201ENST00000332395 IPO9Q96P70 1041 aaKnown RBP22.4■■□□□ 1.18
DDX28-201ENST00000332395 EXOSC9Q06265 439 aaKnown RBP22.4■■□□□ 1.18
DDX28-201ENST00000332395 NEFMP07197 916 aa22.39■■□□□ 1.18
DDX28-201ENST00000332395 RLBP1P12271 317 aa22.39■■□□□ 1.18
DDX28-201ENST00000332395 NOP58Q9Y2X3 529 aaKnown RBP22.39■■□□□ 1.18
DDX28-201ENST00000332395 IL13P35225 146 aa22.39■■□□□ 1.17
DDX28-201ENST00000332395 TNNQ9UQP3 1299 aa22.39■■□□□ 1.17
DDX28-201ENST00000332395 NRKQ7Z2Y5 1582 aa22.38■■□□□ 1.17
DDX28-201ENST00000332395 IGHDP01880 384 aa22.38■■□□□ 1.17
DDX28-201ENST00000332395 AAMPQ13685 434 aa22.38■■□□□ 1.17
DDX28-201ENST00000332395 HMOX1P09601 288 aa22.37■■□□□ 1.17
DDX28-201ENST00000332395 RRS1Q15050 365 aaKnown RBP22.36■■□□□ 1.17
DDX28-201ENST00000332395 TBX22Q9Y458 520 aa22.36■■□□□ 1.17
DDX28-201ENST00000332395 ACEP12821 1306 aa22.35■■□□□ 1.17
DDX28-201ENST00000332395 PLEKHG3A1L390 1219 aa22.35■■□□□ 1.17
DDX28-201ENST00000332395 DEKP35659 375 aaKnown RBP22.35■■□□□ 1.17
DDX28-201ENST00000332395 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
DDX28-201ENST00000332395 AMOTL2Q9Y2J4 779 aa22.35■■□□□ 1.17
DDX28-201ENST00000332395 ZKSCAN2Q63HK3 967 aa22.35■■□□□ 1.17
DDX28-201ENST00000332395 THEMISQ8N1K5 641 aaPredicted RBP22.35■■□□□ 1.17
DDX28-201ENST00000332395 PHACTR3Q96KR7 559 aa22.35■■□□□ 1.17
DDX28-201ENST00000332395 TTC21BQ7Z4L5 1316 aa22.34■■□□□ 1.17
DDX28-201ENST00000332395 NUTM2FA1L443 756 aa22.34■■□□□ 1.17
DDX28-201ENST00000332395 NFE2L2Q16236 605 aa22.34■■□□□ 1.17
DDX28-201ENST00000332395 SMC4Q9NTJ3 1288 aa22.34■■□□□ 1.17
DDX28-201ENST00000332395 PTCH1Q13635 1447 aa22.34■■□□□ 1.17
DDX28-201ENST00000332395 DIP2AQ14689 1571 aa22.33■■□□□ 1.16
DDX28-201ENST00000332395 USP6P35125 1406 aa22.32■■□□□ 1.16
DDX28-201ENST00000332395 RGS3P49796 1198 aa22.32■■□□□ 1.16
DDX28-201ENST00000332395 PAK3O75914 559 aaPredicted RBP22.32■■□□□ 1.16
DDX28-201ENST00000332395 TRHP20396 242 aaPredicted RBP22.32■■□□□ 1.16
DDX28-201ENST00000332395 SSH1Q8WYL5 1049 aa22.32■■□□□ 1.16
DDX28-201ENST00000332395 OVOS2A0A0J9YW53 1432 aa22.31■■□□□ 1.16
DDX28-201ENST00000332395 OVOS2Q6IE36 1432 aa22.31■■□□□ 1.16
DDX28-201ENST00000332395 MVPQ14764 893 aaKnown RBP22.31■■□□□ 1.16
DDX28-201ENST00000332395 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
DDX28-201ENST00000332395 DZIP1LQ8IYY4 767 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms