RNA–Protein interactions for RNA: ENST00000331559.9

MEIS3-201, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 2,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-201ENST00000331559 PDE4AP27815 886 aa30.16■■■□□ 2.42
MEIS3-201ENST00000331559 NEUROD2Q15784 382 aa30.16■■■□□ 2.42
MEIS3-201ENST00000331559 RRP7AQ9Y3A4 280 aaKnown RBP30.16■■■□□ 2.42
MEIS3-201ENST00000331559 CDC42BPGQ6DT37 1551 aa30.14■■■□□ 2.42
MEIS3-201ENST00000331559 PNNQ9H307 717 aaKnown RBP30.13■■■□□ 2.41
MEIS3-201ENST00000331559 C3P01024 1663 aa30.13■■■□□ 2.41
MEIS3-201ENST00000331559 U2SURPO15042 1029 aaKnown RBP30.12■■■□□ 2.41
MEIS3-201ENST00000331559 DIAPH1O60610 1272 aaKnown RBP30.12■■■□□ 2.41
MEIS3-201ENST00000331559 NUDT16Q96DE0 195 aaKnown RBP30.12■■■□□ 2.41
MEIS3-201ENST00000331559 BACH2Q9BYV9 841 aa30.12■■■□□ 2.41
MEIS3-201ENST00000331559 CCDC61Q9Y6R9 512 aa30.11■■■□□ 2.41
MEIS3-201ENST00000331559 SLIT1O75093 1534 aa30.1■■■□□ 2.41
MEIS3-201ENST00000331559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.1■■■□□ 2.41
MEIS3-201ENST00000331559 PLEKHF1Q96S99 279 aa30.1■■■□□ 2.41
MEIS3-201ENST00000331559 ZBTB47Q9UFB7 747 aaPredicted RBP30.1■■■□□ 2.41
MEIS3-201ENST00000331559 MYH16Q9H6N6 1097 aa30.1■■■□□ 2.41
MEIS3-201ENST00000331559 EID1Q9Y6B2 187 aa30.1■■■□□ 2.41
MEIS3-201ENST00000331559 FER1L4A9Z1Z3 1794 aa30.09■■■□□ 2.41
MEIS3-201ENST00000331559 ARHGAP23Q9P227 1491 aa30.09■■■□□ 2.41
MEIS3-201ENST00000331559 MAPK8IP3Q9UPT6 1336 aa30.09■■■□□ 2.41
MEIS3-201ENST00000331559 BCAR3O75815 825 aa30.08■■■□□ 2.41
MEIS3-201ENST00000331559 ROBO2Q9HCK4 1378 aa30.08■■■□□ 2.41
MEIS3-201ENST00000331559 MON2Q7Z3U7 1717 aa30.08■■■□□ 2.41
MEIS3-201ENST00000331559 LTKP29376 864 aa30.08■■■□□ 2.41
MEIS3-201ENST00000331559 SKAP1Q86WV1 359 aa30.08■■■□□ 2.41
MEIS3-201ENST00000331559 CEBPAP49715 358 aaPredicted RBP30.07■■■□□ 2.4
MEIS3-201ENST00000331559 PDE3AQ14432 1141 aa30.06■■■□□ 2.4
MEIS3-201ENST00000331559 NPM2Q86SE8 214 aaKnown RBP30.06■■■□□ 2.4
MEIS3-201ENST00000331559 AKAP12Q02952 1782 aa30.05■■■□□ 2.4
MEIS3-201ENST00000331559 ZNF692Q9BU19 519 aaPredicted RBP30.05■■■□□ 2.4
MEIS3-201ENST00000331559 KDM2BQ8NHM5 1336 aa30.05■■■□□ 2.4
MEIS3-201ENST00000331559 ITSN1Q15811 1721 aa30.04■■■□□ 2.4
MEIS3-201ENST00000331559 CENPQQ7L2Z9 268 aaPredicted RBP30.04■■■□□ 2.4
MEIS3-201ENST00000331559 AATKQ6ZMQ8 1374 aa30.03■■■□□ 2.4
MEIS3-201ENST00000331559 TMPOP42166 694 aaKnown RBP30.03■■■□□ 2.4
MEIS3-201ENST00000331559 POLKQ9UBT6 870 aa30.03■■■□□ 2.4
MEIS3-201ENST00000331559 NBR1Q14596 966 aa30.02■■■□□ 2.4
MEIS3-201ENST00000331559 FCHSD2O94868 740 aa30■■■□□ 2.39
MEIS3-201ENST00000331559 CT47B1P0C2W7 299 aaPredicted RBP30■■■□□ 2.39
MEIS3-201ENST00000331559 RARSP54136 660 aaKnown RBP30■■■□□ 2.39
MEIS3-201ENST00000331559 IL16Q14005 1332 aa29.99■■■□□ 2.39
MEIS3-201ENST00000331559 DIP2AQ14689 1571 aa29.99■■■□□ 2.39
MEIS3-201ENST00000331559 CANXP27824 592 aaKnown RBP29.99■■■□□ 2.39
MEIS3-201ENST00000331559 CDK12Q9NYV4 1490 aaPredicted RBP29.99■■■□□ 2.39
MEIS3-201ENST00000331559 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.99■■■□□ 2.39
MEIS3-201ENST00000331559 PRR36Q9H6K5 1346 aa29.98■■■□□ 2.39
MEIS3-201ENST00000331559 NME9Q86XW9 330 aa29.98■■■□□ 2.39
MEIS3-201ENST00000331559 THEMISQ8N1K5 641 aaPredicted RBP29.98■■■□□ 2.39
MEIS3-201ENST00000331559 COG3Q96JB2 828 aa29.98■■■□□ 2.39
MEIS3-201ENST00000331559 TBX22Q9Y458 520 aa29.98■■■□□ 2.39
MEIS3-201ENST00000331559 TOPAZ1Q8N9V7 1692 aa29.97■■■□□ 2.39
MEIS3-201ENST00000331559 PTPRUQ92729 1446 aa29.96■■■□□ 2.39
MEIS3-201ENST00000331559 MAP2P11137 1827 aaKnown RBP29.95■■■□□ 2.39
MEIS3-201ENST00000331559 LRRC7Q96NW7 1537 aa29.95■■■□□ 2.38
MEIS3-201ENST00000331559 TRIM35Q9UPQ4 493 aa29.95■■■□□ 2.38
MEIS3-201ENST00000331559 PTCH1Q13635 1447 aa29.95■■■□□ 2.38
MEIS3-201ENST00000331559 NEFMP07197 916 aa29.94■■■□□ 2.38
MEIS3-201ENST00000331559 NCKAP5LQ9HCH0 1330 aa29.93■■■□□ 2.38
MEIS3-201ENST00000331559 PPM1GO15355 546 aaPredicted RBP29.92■■■□□ 2.38
MEIS3-201ENST00000331559 TRHP20396 242 aaPredicted RBP29.92■■■□□ 2.38
MEIS3-201ENST00000331559 AAMPQ13685 434 aa29.92■■■□□ 2.38
MEIS3-201ENST00000331559 SLC26A8Q96RN1 970 aa29.92■■■□□ 2.38
MEIS3-201ENST00000331559 PLEKHG3A1L390 1219 aa29.92■■■□□ 2.38
MEIS3-201ENST00000331559 RIPK4P57078 832 aa29.91■■■□□ 2.38
MEIS3-201ENST00000331559 RSPH6AQ9H0K4 717 aa29.91■■■□□ 2.38
MEIS3-201ENST00000331559 NRKQ7Z2Y5 1582 aa29.91■■■□□ 2.38
MEIS3-201ENST00000331559 BCL11AQ9H165 835 aa29.89■■■□□ 2.38
MEIS3-201ENST00000331559 AMOTL2Q9Y2J4 779 aa29.89■■■□□ 2.37
MEIS3-201ENST00000331559 EMILIN1Q9Y6C2 1016 aa29.89■■■□□ 2.37
MEIS3-201ENST00000331559 FRAT1Q92837 279 aaPredicted RBP29.87■■■□□ 2.37
MEIS3-201ENST00000331559 FBLN1P23142 703 aa29.87■■■□□ 2.37
MEIS3-201ENST00000331559 PRKAR2BP31323 418 aa29.87■■■□□ 2.37
MEIS3-201ENST00000331559 IL13P35225 146 aa29.86■■■□□ 2.37
MEIS3-201ENST00000331559 DEKP35659 375 aaKnown RBP29.86■■■□□ 2.37
MEIS3-201ENST00000331559 ZRANB1Q9UGI0 708 aa29.86■■■□□ 2.37
MEIS3-201ENST00000331559 TTC21BQ7Z4L5 1316 aa29.86■■■□□ 2.37
MEIS3-201ENST00000331559 ACEP12821 1306 aa29.85■■■□□ 2.37
MEIS3-201ENST00000331559 PLPPR3Q6T4P5 718 aa29.84■■■□□ 2.37
MEIS3-201ENST00000331559 PANK1Q8TE04 598 aa29.84■■■□□ 2.37
MEIS3-201ENST00000331559 CLUAP1Q96AJ1 413 aa29.84■■■□□ 2.37
MEIS3-201ENST00000331559 USP6P35125 1406 aa29.84■■■□□ 2.37
MEIS3-201ENST00000331559 TSR2Q969E8 191 aaKnown RBP29.83■■■□□ 2.37
MEIS3-201ENST00000331559 COG6Q9Y2V7 657 aa29.83■■■□□ 2.37
MEIS3-201ENST00000331559 NFE2L2Q16236 605 aa29.81■■■□□ 2.36
MEIS3-201ENST00000331559 CEP170BQ9Y4F5 1589 aaPredicted RBP29.81■■■□□ 2.36
MEIS3-201ENST00000331559 OVOS2A0A0J9YW53 1432 aa29.81■■■□□ 2.36
MEIS3-201ENST00000331559 OVOS2Q6IE36 1432 aa29.81■■■□□ 2.36
MEIS3-201ENST00000331559 XRN1Q8IZH2 1706 aaKnown RBP29.81■■■□□ 2.36
MEIS3-201ENST00000331559 EXOSC9Q06265 439 aaKnown RBP29.81■■■□□ 2.36
MEIS3-201ENST00000331559 PIK3R4Q99570 1358 aa29.8■■■□□ 2.36
MEIS3-201ENST00000331559 CALD1Q05682 793 aaKnown RBP29.8■■■□□ 2.36
MEIS3-201ENST00000331559 ZKSCAN2Q63HK3 967 aa29.78■■■□□ 2.36
MEIS3-201ENST00000331559 BCL2L13Q9BXK5 485 aa29.78■■■□□ 2.36
MEIS3-201ENST00000331559 RRS1Q15050 365 aaKnown RBP29.77■■■□□ 2.36
MEIS3-201ENST00000331559 HMOX1P09601 288 aa29.77■■■□□ 2.36
MEIS3-201ENST00000331559 TTC21AQ8NDW8 1320 aa29.76■■■□□ 2.36
MEIS3-201ENST00000331559 NALCNQ8IZF0 1738 aa29.76■■■□□ 2.35
MEIS3-201ENST00000331559 SSH2Q76I76 1423 aa29.76■■■□□ 2.35
MEIS3-201ENST00000331559 RIMS1Q86UR5 1692 aaKnown RBP29.75■■■□□ 2.35
MEIS3-201ENST00000331559 SMC4Q9NTJ3 1288 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms