RNA–Protein interactions for RNA: ENST00000330149.9

TRAPPC6B-201, Transcript of trafficking protein particle complex 6B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,242 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-201ENST00000330149 PDE4CQ08493 712 aa8.05□□□□□ -1.12
TRAPPC6B-201ENST00000330149 SLIT2O94813 1529 aa8.04□□□□□ -1.12
TRAPPC6B-201ENST00000330149 CLTCL1P53675 1640 aa8.04□□□□□ -1.12
TRAPPC6B-201ENST00000330149 COL22A1Q8NFW1 1626 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC6B-201ENST00000330149 PLEKHH1Q9ULM0 1364 aa8.04□□□□□ -1.12
TRAPPC6B-201ENST00000330149 SAFB2Q14151 953 aaKnown RBP eCLIP8.04□□□□□ -1.12
TRAPPC6B-201ENST00000330149 EZH2Q15910 746 aaKnown RBP8.03□□□□□ -1.12
TRAPPC6B-201ENST00000330149 SPHKAPQ2M3C7 1700 aa8.03□□□□□ -1.12
TRAPPC6B-201ENST00000330149 LAMC1P11047 1609 aa8.03□□□□□ -1.12
TRAPPC6B-201ENST00000330149 KRT28Q7Z3Y7 464 aa8.03□□□□□ -1.12
TRAPPC6B-201ENST00000330149 SPATA31A3Q5VYP0 1347 aa8.03□□□□□ -1.12
TRAPPC6B-201ENST00000330149 FAM83GA6ND36 823 aa8.03□□□□□ -1.12
TRAPPC6B-201ENST00000330149 RGL3Q3MIN7 710 aa8.03□□□□□ -1.12
TRAPPC6B-201ENST00000330149 LRP5O75197 1615 aa8.02□□□□□ -1.12
TRAPPC6B-201ENST00000330149 MARF1Q9Y4F3 1742 aaKnown RBP8.02□□□□□ -1.12
TRAPPC6B-201ENST00000330149 VGFO15240 615 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC6B-201ENST00000330149 NEFLP07196 543 aa8.02□□□□□ -1.13
TRAPPC6B-201ENST00000330149 NBR1Q14596 966 aa8.02□□□□□ -1.13
TRAPPC6B-201ENST00000330149 NAIPQ13075 1403 aa8.02□□□□□ -1.13
TRAPPC6B-201ENST00000330149 VPS72Q15906 364 aa8.02□□□□□ -1.13
TRAPPC6B-201ENST00000330149 MSH5O43196 834 aa8.01□□□□□ -1.13
TRAPPC6B-201ENST00000330149 BTG4Q9NY30 223 aa8.01□□□□□ -1.13
TRAPPC6B-201ENST00000330149 PMFBP1Q8TBY8 1022 aa8.01□□□□□ -1.13
TRAPPC6B-201ENST00000330149 ADGRF5Q8IZF2 1346 aa8.01□□□□□ -1.13
TRAPPC6B-201ENST00000330149 TRIM37O94972 964 aa8.01□□□□□ -1.13
TRAPPC6B-201ENST00000330149 USP32Q8NFA0 1604 aa8□□□□□ -1.13
TRAPPC6B-201ENST00000330149 USP35Q9P2H5 1018 aa8□□□□□ -1.13
TRAPPC6B-201ENST00000330149 HFM1A2PYH4 1435 aa8□□□□□ -1.13
TRAPPC6B-201ENST00000330149 ROCK1Q13464 1354 aa7.99□□□□□ -1.13
TRAPPC6B-201ENST00000330149 ONECUT3O60422 494 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC6B-201ENST00000330149 LRPPRCP42704 1394 aaKnown RBP7.99□□□□□ -1.13
TRAPPC6B-201ENST00000330149 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.98□□□□□ -1.13
TRAPPC6B-201ENST00000330149 CDK11BP21127 795 aaKnown RBP7.98□□□□□ -1.13
TRAPPC6B-201ENST00000330149 PSME1Q06323 249 aa7.98□□□□□ -1.13
TRAPPC6B-201ENST00000330149 PHF8Q9UPP1 1060 aa7.98□□□□□ -1.13
TRAPPC6B-201ENST00000330149 CDC42BPGQ6DT37 1551 aa7.98□□□□□ -1.13
TRAPPC6B-201ENST00000330149 KIF1BO60333 1816 aa7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 PLCH1Q4KWH8 1693 aa7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 RGPD8O14715 1765 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 APBA3O96018 575 aa7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 HIRIP3Q9BW71 556 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 CCDC144AA2RUR9 1427 aa7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 CHRNA2Q15822 529 aa7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 STRN4Q9NRL3 753 aa7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 PPP1R1BQ9UD71 204 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 TNS3Q68CZ2 1445 aa7.97□□□□□ -1.13
TRAPPC6B-201ENST00000330149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.96□□□□□ -1.13
TRAPPC6B-201ENST00000330149 UBE2Q2Q8WVN8 375 aa7.96□□□□□ -1.14
TRAPPC6B-201ENST00000330149 CAMKK2Q96RR4 588 aa7.95□□□□□ -1.14
TRAPPC6B-201ENST00000330149 PAK3O75914 559 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC6B-201ENST00000330149 NUTM2GQ5VZR2 741 aa7.95□□□□□ -1.14
TRAPPC6B-201ENST00000330149 PDGFDQ9GZP0 370 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC6B-201ENST00000330149 PCNTO95613 3336 aa7.95□□□□□ -1.14
TRAPPC6B-201ENST00000330149 PRDM11Q9NQV5 511 aa7.94□□□□□ -1.14
TRAPPC6B-201ENST00000330149 PRAM1Q96QH2 718 aa7.93□□□□□ -1.14
TRAPPC6B-201ENST00000330149 SPATA31A5Q5VU36 1347 aa7.93□□□□□ -1.14
TRAPPC6B-201ENST00000330149 SPATA31A7Q8IWB4 1347 aa7.93□□□□□ -1.14
TRAPPC6B-201ENST00000330149 ZC3H6P61129 1189 aaKnown RBP7.93□□□□□ -1.14
TRAPPC6B-201ENST00000330149 SENP3-EIF4A1A0A087X0R7 540 aa7.93□□□□□ -1.14
TRAPPC6B-201ENST00000330149 CAMTA1Q9Y6Y1 1673 aa7.93□□□□□ -1.14
TRAPPC6B-201ENST00000330149 PPLO60437 1756 aa7.93□□□□□ -1.14
TRAPPC6B-201ENST00000330149 CFAP70Q5T0N1 1121 aa7.92□□□□□ -1.14
TRAPPC6B-201ENST00000330149 FMN2Q9NZ56 1722 aa7.92□□□□□ -1.14
TRAPPC6B-201ENST00000330149 PRAG1Q86YV5 1406 aa7.92□□□□□ -1.14
TRAPPC6B-201ENST00000330149 RBM19Q9Y4C8 960 aaKnown RBP7.92□□□□□ -1.14
TRAPPC6B-201ENST00000330149 RPGRIP1LQ68CZ1 1315 aa7.92□□□□□ -1.14
TRAPPC6B-201ENST00000330149 YTHDC2Q9H6S0 1430 aaKnown RBP7.92□□□□□ -1.14
TRAPPC6B-201ENST00000330149 ABCA3Q99758 1704 aa7.92□□□□□ -1.14
TRAPPC6B-201ENST00000330149 NWD2Q9ULI1 1742 aa7.92□□□□□ -1.14
TRAPPC6B-201ENST00000330149 TNS1Q9HBL0 1735 aaKnown RBP7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 ARHGEF10O15013 1369 aa7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 ABCC11Q96J66 1382 aa7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 RBM25P49756 843 aaKnown RBP7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 ZNF784Q8NCA9 323 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 SPON1Q9HCB6 807 aa7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 FOXD4L1Q9NU39 408 aa7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 MINK1Q8N4C8 1332 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 RGPD1P0DJD0 1748 aa7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 ZBTB7AO95365 584 aa7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 DDX10Q13206 875 aaKnown RBP7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 PTF1AQ7RTS3 328 aa7.91□□□□□ -1.14
TRAPPC6B-201ENST00000330149 NRAPQ86VF7 1730 aa7.9□□□□□ -1.14
TRAPPC6B-201ENST00000330149 KIAA0232Q92628 1395 aa7.9□□□□□ -1.14
TRAPPC6B-201ENST00000330149 FAM196AQ6ZSG2 479 aa7.9□□□□□ -1.14
TRAPPC6B-201ENST00000330149 ZNF526Q8TF50 670 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC6B-201ENST00000330149 POGKQ9P215 609 aa7.9□□□□□ -1.14
TRAPPC6B-201ENST00000330149 TECPR2O15040 1411 aa7.9□□□□□ -1.14
TRAPPC6B-201ENST00000330149 NRXN1Q9ULB1 1477 aa7.9□□□□□ -1.14
TRAPPC6B-201ENST00000330149 PDE3BQ13370 1112 aa7.9□□□□□ -1.14
TRAPPC6B-201ENST00000330149 SPATA31A1Q5TZJ5 1347 aa7.9□□□□□ -1.15
TRAPPC6B-201ENST00000330149 KIF1AQ12756 1690 aa7.9□□□□□ -1.15
TRAPPC6B-201ENST00000330149 SBNO1A3KN83 1393 aa7.9□□□□□ -1.15
TRAPPC6B-201ENST00000330149 BRPF1P55201 1214 aaPredicted RBP7.9□□□□□ -1.15
TRAPPC6B-201ENST00000330149 ANO8Q9HCE9 1232 aaPredicted RBP7.9□□□□□ -1.15
TRAPPC6B-201ENST00000330149 BRPF3Q9ULD4 1205 aa7.9□□□□□ -1.15
TRAPPC6B-201ENST00000330149 PRR36Q9H6K5 1346 aa7.89□□□□□ -1.15
TRAPPC6B-201ENST00000330149 DCAF8L1A6NGE4 600 aa7.89□□□□□ -1.15
TRAPPC6B-201ENST00000330149 KCNQ2O43526 872 aa7.89□□□□□ -1.15
TRAPPC6B-201ENST00000330149 NBPF8Q3BBV2 869 aa7.89□□□□□ -1.15
TRAPPC6B-201ENST00000330149 NBPF14Q5TI25 921 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms