RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 SALL3Q9BXA9 1300 aa3.97□□□□□ -1.77
RGPD6-201ENST00000329516 FMN1Q68DA7 1419 aa3.97□□□□□ -1.77
RGPD6-201ENST00000329516 SALL2Q9Y467 1007 aaPredicted RBP3.97□□□□□ -1.77
RGPD6-201ENST00000329516 COL24A1Q17RW2 1714 aa3.97□□□□□ -1.77
RGPD6-201ENST00000329516 KANK1Q14678 1352 aa3.97□□□□□ -1.77
RGPD6-201ENST00000329516 CDK5RAP2Q96SN8 1893 aa3.97□□□□□ -1.77
RGPD6-201ENST00000329516 AGLP35573 1532 aa3.97□□□□□ -1.77
RGPD6-201ENST00000329516 CDK12Q9NYV4 1490 aaPredicted RBP3.96□□□□□ -1.78
RGPD6-201ENST00000329516 NKX2-3Q8TAU0 364 aa3.96□□□□□ -1.78
RGPD6-201ENST00000329516 YTHDC1Q96MU7 727 aaKnown RBP3.96□□□□□ -1.78
RGPD6-201ENST00000329516 LTBP4Q8N2S1 1624 aa3.96□□□□□ -1.78
RGPD6-201ENST00000329516 PELP1Q8IZL8 1130 aaKnown RBP3.96□□□□□ -1.78
RGPD6-201ENST00000329516 ATP7BP35670 1465 aa3.95□□□□□ -1.78
RGPD6-201ENST00000329516 TSPOAP1O95153 1857 aa3.95□□□□□ -1.78
RGPD6-201ENST00000329516 BCORQ6W2J9 1755 aa3.95□□□□□ -1.78
RGPD6-201ENST00000329516 IL25Q9H293 177 aa3.95□□□□□ -1.78
RGPD6-201ENST00000329516 WASHC2CQ9Y4E1 1318 aa3.95□□□□□ -1.78
RGPD6-201ENST00000329516 DISP2A7MBM2 1401 aa3.95□□□□□ -1.78
RGPD6-201ENST00000329516 PLEKHF1Q96S99 279 aa3.94□□□□□ -1.78
RGPD6-201ENST00000329516 KIF1BO60333 1816 aa3.94□□□□□ -1.78
RGPD6-201ENST00000329516 LMTK3Q96Q04 1460 aa3.94□□□□□ -1.78
RGPD6-201ENST00000329516 ZNF316A6NFI3 1004 aaPredicted RBP3.94□□□□□ -1.78
RGPD6-201ENST00000329516 DDX60LQ5H9U9 1706 aaKnown RBP3.94□□□□□ -1.78
RGPD6-201ENST00000329516 C9orf84Q5VXU9 1444 aa3.94□□□□□ -1.78
RGPD6-201ENST00000329516 PPIP5K1Q6PFW1 1433 aa3.94□□□□□ -1.78
RGPD6-201ENST00000329516 KIAA1551Q9HCM1 1747 aa3.94□□□□□ -1.78
RGPD6-201ENST00000329516 LTN1O94822 1766 aa3.93□□□□□ -1.78
RGPD6-201ENST00000329516 LRP10Q7Z4F1 713 aa3.93□□□□□ -1.78
RGPD6-201ENST00000329516 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.93□□□□□ -1.78
RGPD6-201ENST00000329516 LRP5O75197 1615 aa3.93□□□□□ -1.78
RGPD6-201ENST00000329516 PARP4Q9UKK3 1724 aaKnown RBP3.93□□□□□ -1.78
RGPD6-201ENST00000329516 SIRT2Q8IXJ6 389 aa3.92□□□□□ -1.78
RGPD6-201ENST00000329516 LRBAP50851 2863 aa3.92□□□□□ -1.78
RGPD6-201ENST00000329516 FER1L6Q2WGJ9 1857 aa3.92□□□□□ -1.78
RGPD6-201ENST00000329516 FANCGO15287 622 aa3.92□□□□□ -1.78
RGPD6-201ENST00000329516 C8orf34Q49A92 452 aa3.92□□□□□ -1.78
RGPD6-201ENST00000329516 COL16A1Q07092 1604 aaPredicted RBP3.92□□□□□ -1.78
RGPD6-201ENST00000329516 ERBB3P21860 1342 aa3.92□□□□□ -1.78
RGPD6-201ENST00000329516 PAPPA2Q9BXP8 1791 aa3.92□□□□□ -1.78
RGPD6-201ENST00000329516 NPC1L1Q9UHC9 1359 aa3.92□□□□□ -1.78
RGPD6-201ENST00000329516 A2ML1A8K2U0 1454 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 MRC1P22897 1456 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 PIK3R4Q99570 1358 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 CARMIL2Q6F5E8 1435 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 POGZQ7Z3K3 1410 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 ASXL2Q76L83 1435 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 IL27Q8NEV9 243 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 DUOX1Q9NRD9 1551 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 HEG1Q9ULI3 1381 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 ERBB4Q15303 1308 aa3.91□□□□□ -1.78
RGPD6-201ENST00000329516 DOCK2Q92608 1830 aa3.9□□□□□ -1.78
RGPD6-201ENST00000329516 PXDNQ92626 1479 aa3.9□□□□□ -1.78
RGPD6-201ENST00000329516 TAF1P21675 1872 aa3.9□□□□□ -1.78
RGPD6-201ENST00000329516 A0A0G2JMZ2 1700 aa3.9□□□□□ -1.78
RGPD6-201ENST00000329516 RLBP1P12271 317 aa3.9□□□□□ -1.79
RGPD6-201ENST00000329516 IL17RAQ96F46 866 aa3.9□□□□□ -1.79
RGPD6-201ENST00000329516 DIEXFQ68CQ4 756 aaKnown RBP3.9□□□□□ -1.79
RGPD6-201ENST00000329516 PRDM4Q9UKN5 801 aa3.9□□□□□ -1.79
RGPD6-201ENST00000329516 CD2BP2O95400 341 aaKnown RBP3.89□□□□□ -1.79
RGPD6-201ENST00000329516 SIPA1L1O43166 1804 aa3.89□□□□□ -1.79
RGPD6-201ENST00000329516 C4AP0C0L4 1744 aa3.89□□□□□ -1.79
RGPD6-201ENST00000329516 C4BP0C0L5 1744 aa3.89□□□□□ -1.79
RGPD6-201ENST00000329516 RTL1A6NKG5 1358 aa3.89□□□□□ -1.79
RGPD6-201ENST00000329516 NEO1Q92859 1461 aa3.89□□□□□ -1.79
RGPD6-201ENST00000329516 SPEF2Q9C093 1822 aa3.89□□□□□ -1.79
RGPD6-201ENST00000329516 ADCY9O60503 1353 aa3.89□□□□□ -1.79
RGPD6-201ENST00000329516 CDCA7LQ96GN5 454 aa3.88□□□□□ -1.79
RGPD6-201ENST00000329516 LAMB2P55268 1798 aa3.88□□□□□ -1.79
RGPD6-201ENST00000329516 COL15A1P39059 1388 aa3.88□□□□□ -1.79
RGPD6-201ENST00000329516 DUSP27Q5VZP5 1158 aa3.88□□□□□ -1.79
RGPD6-201ENST00000329516 AATKQ6ZMQ8 1374 aa3.88□□□□□ -1.79
RGPD6-201ENST00000329516 RBM19Q9Y4C8 960 aaKnown RBP3.88□□□□□ -1.79
RGPD6-201ENST00000329516 OVOS2A0A0J9YW53 1432 aa3.87□□□□□ -1.79
RGPD6-201ENST00000329516 OVOS2Q6IE36 1432 aa3.87□□□□□ -1.79
RGPD6-201ENST00000329516 BCL9LQ86UU0 1499 aa3.87□□□□□ -1.79
RGPD6-201ENST00000329516 IBTKQ9P2D0 1353 aaPredicted RBP3.87□□□□□ -1.79
RGPD6-201ENST00000329516 NRXN2Q9P2S2 1712 aa3.87□□□□□ -1.79
RGPD6-201ENST00000329516 MPHOSPH9Q99550 1183 aa3.87□□□□□ -1.79
RGPD6-201ENST00000329516 COL5A3P25940 1745 aaPredicted RBP3.87□□□□□ -1.79
RGPD6-201ENST00000329516 ANKRD30AQ9BXX3 1397 aa3.87□□□□□ -1.79
RGPD6-201ENST00000329516 TRRAPQ9Y4A5 3859 aa3.87□□□□□ -1.79
RGPD6-201ENST00000329516 TAF1LQ8IZX4 1826 aa3.86□□□□□ -1.79
RGPD6-201ENST00000329516 THSD7AQ9UPZ6 1657 aa3.86□□□□□ -1.79
RGPD6-201ENST00000329516 ZNFX1Q9P2E3 1918 aaKnown RBP3.86□□□□□ -1.79
RGPD6-201ENST00000329516 PALLDQ8WX93 1383 aa3.86□□□□□ -1.79
RGPD6-201ENST00000329516 YTHDC2Q9H6S0 1430 aaKnown RBP3.86□□□□□ -1.79
RGPD6-201ENST00000329516 CACNA1FO60840 1977 aa3.86□□□□□ -1.79
RGPD6-201ENST00000329516 NRAPQ86VF7 1730 aa3.86□□□□□ -1.79
RGPD6-201ENST00000329516 CCDC88AQ3V6T2 1871 aa3.85□□□□□ -1.79
RGPD6-201ENST00000329516 ST3GAL1Q11201 340 aa3.85□□□□□ -1.79
RGPD6-201ENST00000329516 ADGRF5Q8IZF2 1346 aa3.85□□□□□ -1.79
RGPD6-201ENST00000329516 PRR36Q9H6K5 1346 aa3.85□□□□□ -1.79
RGPD6-201ENST00000329516 LRRC37A2A6NM11 1700 aa3.85□□□□□ -1.79
RGPD6-201ENST00000329516 ITPR1Q14643 2758 aa3.85□□□□□ -1.79
RGPD6-201ENST00000329516 RANGAP1P46060 587 aaPredicted RBP3.85□□□□□ -1.79
RGPD6-201ENST00000329516 DCAF8L1A6NGE4 600 aa3.85□□□□□ -1.79
RGPD6-201ENST00000329516 HSPA5P11021 654 aaKnown RBP3.85□□□□□ -1.79
RGPD6-201ENST00000329516 COL14A1Q05707 1796 aaKnown RBP3.85□□□□□ -1.79
RGPD6-201ENST00000329516 NFATC2IPQ8NCF5 419 aa3.84□□□□□ -1.79
RGPD6-201ENST00000329516 LRRC37AA6NMS7 1700 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms