RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 NKTRP30414 1462 aaKnown RBP18.85■□□□□ 0.61
CHEK2-201ENST00000328354 KCNA6P17658 529 aa18.85■□□□□ 0.61
CHEK2-201ENST00000328354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.85■□□□□ 0.61
CHEK2-201ENST00000328354 CCDC146Q8IYE0 955 aa18.85■□□□□ 0.61
CHEK2-201ENST00000328354 CDCA7LQ96GN5 454 aa18.85■□□□□ 0.61
CHEK2-201ENST00000328354 IQSEC2Q5JU85 1478 aa18.84■□□□□ 0.61
CHEK2-201ENST00000328354 RGPD8O14715 1765 aaPredicted RBP18.84■□□□□ 0.61
CHEK2-201ENST00000328354 FMN2Q9NZ56 1722 aa18.84■□□□□ 0.61
CHEK2-201ENST00000328354 APAF1O14727 1248 aa18.84■□□□□ 0.61
CHEK2-201ENST00000328354 NPHP4O75161 1426 aaPredicted RBP18.83■□□□□ 0.61
CHEK2-201ENST00000328354 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.61
CHEK2-201ENST00000328354 AATKQ6ZMQ8 1374 aa18.82■□□□□ 0.6
CHEK2-201ENST00000328354 RUNDC1Q96C34 613 aa18.82■□□□□ 0.6
CHEK2-201ENST00000328354 USP6P35125 1406 aa18.81■□□□□ 0.6
CHEK2-201ENST00000328354 NALCNQ8IZF0 1738 aa18.81■□□□□ 0.6
CHEK2-201ENST00000328354 ACEP12821 1306 aa18.81■□□□□ 0.6
CHEK2-201ENST00000328354 GOLGA2Q08379 1002 aa18.8■□□□□ 0.6
CHEK2-201ENST00000328354 NCBP3Q53F19 620 aaKnown RBP18.8■□□□□ 0.6
CHEK2-201ENST00000328354 NME9Q86XW9 330 aa18.8■□□□□ 0.6
CHEK2-201ENST00000328354 SSH2Q76I76 1423 aa18.8■□□□□ 0.6
CHEK2-201ENST00000328354 IRX6P78412 446 aaPredicted RBP18.8■□□□□ 0.6
CHEK2-201ENST00000328354 RCAN3Q9UKA8 241 aa18.79■□□□□ 0.6
CHEK2-201ENST00000328354 NWD1Q149M9 1564 aa18.78■□□□□ 0.6
CHEK2-201ENST00000328354 POLKQ9UBT6 870 aa18.78■□□□□ 0.6
CHEK2-201ENST00000328354 TTC21BQ7Z4L5 1316 aa18.78■□□□□ 0.6
CHEK2-201ENST00000328354 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
CHEK2-201ENST00000328354 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.6
CHEK2-201ENST00000328354 CDK12Q9NYV4 1490 aaPredicted RBP18.77■□□□□ 0.6
CHEK2-201ENST00000328354 SLFN5Q08AF3 891 aa18.77■□□□□ 0.6
CHEK2-201ENST00000328354 COG3Q96JB2 828 aa18.77■□□□□ 0.6
CHEK2-201ENST00000328354 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
CHEK2-201ENST00000328354 OVOS2A0A0J9YW53 1432 aa18.76■□□□□ 0.59
CHEK2-201ENST00000328354 OVOS2Q6IE36 1432 aa18.76■□□□□ 0.59
CHEK2-201ENST00000328354 U2AF1L5P0DN76 240 aaPredicted RBP18.76■□□□□ 0.59
CHEK2-201ENST00000328354 U2AF1Q01081 240 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHEK2-201ENST00000328354 NUTM2FA1L443 756 aa18.75■□□□□ 0.59
CHEK2-201ENST00000328354 DIAPH1O60610 1272 aaKnown RBP18.74■□□□□ 0.59
CHEK2-201ENST00000328354 CCDC27Q2M243 656 aa18.74■□□□□ 0.59
CHEK2-201ENST00000328354 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
CHEK2-201ENST00000328354 PPP4R2Q9NY27 417 aa18.74■□□□□ 0.59
CHEK2-201ENST00000328354 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
CHEK2-201ENST00000328354 RRP1P56182 461 aaKnown RBP18.73■□□□□ 0.59
CHEK2-201ENST00000328354 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
CHEK2-201ENST00000328354 TTC21AQ8NDW8 1320 aa18.73■□□□□ 0.59
CHEK2-201ENST00000328354 ADGRL3Q9HAR2 1447 aa18.73■□□□□ 0.59
CHEK2-201ENST00000328354 WWC1Q8IX03 1113 aa18.73■□□□□ 0.59
CHEK2-201ENST00000328354 PLEKHF1Q96S99 279 aa18.73■□□□□ 0.59
CHEK2-201ENST00000328354 E9PSI1 815 aa18.72■□□□□ 0.59
CHEK2-201ENST00000328354 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
CHEK2-201ENST00000328354 USP31Q70CQ4 1352 aa18.71■□□□□ 0.59
CHEK2-201ENST00000328354 USP54Q70EL1 1684 aa18.71■□□□□ 0.59
CHEK2-201ENST00000328354 U2SURPO15042 1029 aaKnown RBP18.7■□□□□ 0.58
CHEK2-201ENST00000328354 FBLN1P23142 703 aa18.7■□□□□ 0.58
CHEK2-201ENST00000328354 PMFBP1Q8TBY8 1022 aa18.69■□□□□ 0.58
CHEK2-201ENST00000328354 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
CHEK2-201ENST00000328354 EMILIN1Q9Y6C2 1016 aa18.69■□□□□ 0.58
CHEK2-201ENST00000328354 WDR63Q8IWG1 891 aa18.69■□□□□ 0.58
CHEK2-201ENST00000328354 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
CHEK2-201ENST00000328354 PIK3C2AO00443 1686 aa18.69■□□□□ 0.58
CHEK2-201ENST00000328354 NGDNQ8NEJ9 315 aaKnown RBP18.68■□□□□ 0.58
CHEK2-201ENST00000328354 LRRC7Q96NW7 1537 aa18.68■□□□□ 0.58
CHEK2-201ENST00000328354 FCHSD2O94868 740 aa18.67■□□□□ 0.58
CHEK2-201ENST00000328354 IL13P35225 146 aa18.67■□□□□ 0.58
CHEK2-201ENST00000328354 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
CHEK2-201ENST00000328354 MARF1Q9Y4F3 1742 aaKnown RBP18.66■□□□□ 0.58
CHEK2-201ENST00000328354 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
CHEK2-201ENST00000328354 PEAK1Q9H792 1746 aa18.64■□□□□ 0.57
CHEK2-201ENST00000328354 RRS1Q15050 365 aaKnown RBP18.64■□□□□ 0.57
CHEK2-201ENST00000328354 NEUROD2Q15784 382 aa18.64■□□□□ 0.57
CHEK2-201ENST00000328354 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
CHEK2-201ENST00000328354 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.57
CHEK2-201ENST00000328354 TMPOP42166 694 aaKnown RBP18.63■□□□□ 0.57
CHEK2-201ENST00000328354 PHF8Q9UPP1 1060 aa18.62■□□□□ 0.57
CHEK2-201ENST00000328354 ZNF335Q9H4Z2 1342 aaPredicted RBP18.62■□□□□ 0.57
CHEK2-201ENST00000328354 RGPD1P0DJD0 1748 aa18.6■□□□□ 0.57
CHEK2-201ENST00000328354 STRCP1A6NGW2 1772 aa18.6■□□□□ 0.57
CHEK2-201ENST00000328354 RBM33Q96EV2 1170 aaKnown RBP18.59■□□□□ 0.57
CHEK2-201ENST00000328354 TRIM35Q9UPQ4 493 aa18.59■□□□□ 0.57
CHEK2-201ENST00000328354 PRKAR2BP31323 418 aa18.58■□□□□ 0.57
CHEK2-201ENST00000328354 IL16Q14005 1332 aa18.58■□□□□ 0.56
CHEK2-201ENST00000328354 LTBP4Q8N2S1 1624 aa18.57■□□□□ 0.56
CHEK2-201ENST00000328354 PROSER2Q86WR7 435 aaPredicted RBP18.57■□□□□ 0.56
CHEK2-201ENST00000328354 NCOA3Q9Y6Q9 1424 aa18.57■□□□□ 0.56
CHEK2-201ENST00000328354 B4GALNT3Q6L9W6 998 aa18.56■□□□□ 0.56
CHEK2-201ENST00000328354 MYH16Q9H6N6 1097 aa18.56■□□□□ 0.56
CHEK2-201ENST00000328354 SBNO1A3KN83 1393 aa18.56■□□□□ 0.56
CHEK2-201ENST00000328354 NEFMP07197 916 aa18.56■□□□□ 0.56
CHEK2-201ENST00000328354 RIPK4P57078 832 aa18.56■□□□□ 0.56
CHEK2-201ENST00000328354 EIF4A2Q14240 407 aaKnown RBP18.56■□□□□ 0.56
CHEK2-201ENST00000328354 MAP3K19Q56UN5 1328 aa18.56■□□□□ 0.56
CHEK2-201ENST00000328354 KIF24Q5T7B8 1368 aa18.56■□□□□ 0.56
CHEK2-201ENST00000328354 DLG5Q8TDM6 1919 aa18.56■□□□□ 0.56
CHEK2-201ENST00000328354 KIF1AQ12756 1690 aa18.55■□□□□ 0.56
CHEK2-201ENST00000328354 FLT4P35916 1363 aa18.55■□□□□ 0.56
CHEK2-201ENST00000328354 PLIN1O60240 522 aa18.55■□□□□ 0.56
CHEK2-201ENST00000328354 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
CHEK2-201ENST00000328354 HMOX1P09601 288 aa18.54■□□□□ 0.56
CHEK2-201ENST00000328354 NLRP6P59044 892 aa18.54■□□□□ 0.56
CHEK2-201ENST00000328354 C14orf37Q86TY3 774 aa18.54■□□□□ 0.56
CHEK2-201ENST00000328354 EXOC6Q8TAG9 804 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms