RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 NUDT16Q96DE0 195 aaKnown RBP25.33■■□□□ 1.65
CHMP6-201ENST00000325167 ROBO2Q9HCK4 1378 aa25.33■■□□□ 1.65
CHMP6-201ENST00000325167 CDC42BPGQ6DT37 1551 aa25.33■■□□□ 1.65
CHMP6-201ENST00000325167 ZNF692Q9BU19 519 aaPredicted RBP25.32■■□□□ 1.64
CHMP6-201ENST00000325167 PTCH1Q13635 1447 aa25.32■■□□□ 1.64
CHMP6-201ENST00000325167 UBAP1LF5GYI3 381 aa25.32■■□□□ 1.64
CHMP6-201ENST00000325167 TRMT2AQ8IZ69 625 aaKnown RBP25.32■■□□□ 1.64
CHMP6-201ENST00000325167 PIK3R4Q99570 1358 aa25.3■■□□□ 1.64
CHMP6-201ENST00000325167 PNNQ9H307 717 aaKnown RBP25.29■■□□□ 1.64
CHMP6-201ENST00000325167 CCDC27Q2M243 656 aa25.29■■□□□ 1.64
CHMP6-201ENST00000325167 TSHZ2Q9NRE2 1034 aa25.28■■□□□ 1.64
CHMP6-201ENST00000325167 PNPLA6Q8IY17 1366 aa25.28■■□□□ 1.64
CHMP6-201ENST00000325167 COL3A1P02461 1466 aaPredicted RBP25.27■■□□□ 1.64
CHMP6-201ENST00000325167 STRCP1A6NGW2 1772 aa25.27■■□□□ 1.64
CHMP6-201ENST00000325167 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.26■■□□□ 1.63
CHMP6-201ENST00000325167 MON2Q7Z3U7 1717 aa25.26■■□□□ 1.63
CHMP6-201ENST00000325167 NKTRP30414 1462 aaKnown RBP25.26■■□□□ 1.63
CHMP6-201ENST00000325167 U2AF1L5P0DN76 240 aaPredicted RBP25.25■■□□□ 1.63
CHMP6-201ENST00000325167 U2AF1Q01081 240 aaKnown RBP eCLIP25.25■■□□□ 1.63
CHMP6-201ENST00000325167 CCDC136Q96JN2 1154 aa25.25■■□□□ 1.63
CHMP6-201ENST00000325167 PTPRUQ92729 1446 aa25.25■■□□□ 1.63
CHMP6-201ENST00000325167 B4GALNT3Q6L9W6 998 aa25.24■■□□□ 1.63
CHMP6-201ENST00000325167 WDR63Q8IWG1 891 aa25.24■■□□□ 1.63
CHMP6-201ENST00000325167 SLC26A8Q96RN1 970 aa25.24■■□□□ 1.63
CHMP6-201ENST00000325167 ITSN1Q15811 1721 aa25.24■■□□□ 1.63
CHMP6-201ENST00000325167 AKAP12Q02952 1782 aa25.24■■□□□ 1.63
CHMP6-201ENST00000325167 WWC1Q8IX03 1113 aa25.23■■□□□ 1.63
CHMP6-201ENST00000325167 PHF23Q9BUL5 403 aaPredicted RBP25.23■■□□□ 1.63
CHMP6-201ENST00000325167 AMOTL2Q9Y2J4 779 aa25.23■■□□□ 1.63
CHMP6-201ENST00000325167 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.23■■□□□ 1.63
CHMP6-201ENST00000325167 AATKQ6ZMQ8 1374 aa25.23■■□□□ 1.63
CHMP6-201ENST00000325167 TCP11L2Q8N4U5 519 aa25.23■■□□□ 1.63
CHMP6-201ENST00000325167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.22■■□□□ 1.63
CHMP6-201ENST00000325167 PLEKHG3A1L390 1219 aa25.21■■□□□ 1.63
CHMP6-201ENST00000325167 DIAPH1O60610 1272 aaKnown RBP25.21■■□□□ 1.63
CHMP6-201ENST00000325167 TOPAZ1Q8N9V7 1692 aa25.2■■□□□ 1.63
CHMP6-201ENST00000325167 XRN1Q8IZH2 1706 aaKnown RBP25.18■■□□□ 1.62
CHMP6-201ENST00000325167 PRR36Q9H6K5 1346 aa25.18■■□□□ 1.62
CHMP6-201ENST00000325167 COG3Q96JB2 828 aa25.18■■□□□ 1.62
CHMP6-201ENST00000325167 LRRC7Q96NW7 1537 aa25.17■■□□□ 1.62
CHMP6-201ENST00000325167 PIP4K2BP78356 416 aa25.17■■□□□ 1.62
CHMP6-201ENST00000325167 MAPK8IP3Q9UPT6 1336 aa25.16■■□□□ 1.62
CHMP6-201ENST00000325167 U2SURPO15042 1029 aaKnown RBP25.16■■□□□ 1.62
CHMP6-201ENST00000325167 POLKQ9UBT6 870 aa25.15■■□□□ 1.62
CHMP6-201ENST00000325167 CDK12Q9NYV4 1490 aaPredicted RBP25.15■■□□□ 1.62
CHMP6-201ENST00000325167 TOM1O60784 492 aa25.13■■□□□ 1.61
CHMP6-201ENST00000325167 FCHSD2O94868 740 aa25.13■■□□□ 1.61
CHMP6-201ENST00000325167 MYH16Q9H6N6 1097 aa25.13■■□□□ 1.61
CHMP6-201ENST00000325167 ANKARQ7Z5J8 1434 aa25.12■■□□□ 1.61
CHMP6-201ENST00000325167 NME9Q86XW9 330 aa25.12■■□□□ 1.61
CHMP6-201ENST00000325167 EXOC6Q8TAG9 804 aa25.12■■□□□ 1.61
CHMP6-201ENST00000325167 PLEKHF1Q96S99 279 aa25.12■■□□□ 1.61
CHMP6-201ENST00000325167 NEFMP07197 916 aa25.11■■□□□ 1.61
CHMP6-201ENST00000325167 USP6P35125 1406 aa25.1■■□□□ 1.61
CHMP6-201ENST00000325167 NRKQ7Z2Y5 1582 aa25.1■■□□□ 1.61
CHMP6-201ENST00000325167 SPINK5Q9NQ38 1064 aaPredicted RBP25.1■■□□□ 1.61
CHMP6-201ENST00000325167 ACEP12821 1306 aa25.1■■□□□ 1.61
CHMP6-201ENST00000325167 TTC21BQ7Z4L5 1316 aa25.09■■□□□ 1.61
CHMP6-201ENST00000325167 NEUROD2Q15784 382 aa25.09■■□□□ 1.61
CHMP6-201ENST00000325167 TTC21AQ8NDW8 1320 aa25.09■■□□□ 1.61
CHMP6-201ENST00000325167 RRP7AQ9Y3A4 280 aaKnown RBP25.07■■□□□ 1.6
CHMP6-201ENST00000325167 IL16Q14005 1332 aa25.07■■□□□ 1.6
CHMP6-201ENST00000325167 CT47B1P0C2W7 299 aaPredicted RBP25.07■■□□□ 1.6
CHMP6-201ENST00000325167 TMPOP42166 694 aaKnown RBP25.07■■□□□ 1.6
CHMP6-201ENST00000325167 MAP2P11137 1827 aaKnown RBP25.06■■□□□ 1.6
CHMP6-201ENST00000325167 XIRP1Q702N8 1843 aaKnown RBP25.06■■□□□ 1.6
CHMP6-201ENST00000325167 PLIN1O60240 522 aa25.05■■□□□ 1.6
CHMP6-201ENST00000325167 HSPA1LP34931 641 aa25.04■■□□□ 1.6
CHMP6-201ENST00000325167 OVOS2A0A0J9YW53 1432 aa25.04■■□□□ 1.6
CHMP6-201ENST00000325167 OVOS2Q6IE36 1432 aa25.04■■□□□ 1.6
CHMP6-201ENST00000325167 CRBNQ96SW2 442 aa25.04■■□□□ 1.6
CHMP6-201ENST00000325167 SSH2Q76I76 1423 aa25.03■■□□□ 1.6
CHMP6-201ENST00000325167 PPM1GO15355 546 aaPredicted RBP25.03■■□□□ 1.6
CHMP6-201ENST00000325167 KCNA6P17658 529 aa25.02■■□□□ 1.6
CHMP6-201ENST00000325167 RBM33Q96EV2 1170 aaKnown RBP25.01■■□□□ 1.59
CHMP6-201ENST00000325167 USP31Q70CQ4 1352 aa25.01■■□□□ 1.59
CHMP6-201ENST00000325167 IL13P35225 146 aa25.01■■□□□ 1.59
CHMP6-201ENST00000325167 RSPH6AQ9H0K4 717 aa25.01■■□□□ 1.59
CHMP6-201ENST00000325167 CHD2O14647 1828 aaKnown RBP25■■□□□ 1.59
CHMP6-201ENST00000325167 PDE3AQ14432 1141 aa25■■□□□ 1.59
CHMP6-201ENST00000325167 EMILIN1Q9Y6C2 1016 aa25■■□□□ 1.59
CHMP6-201ENST00000325167 TMEM94Q12767 1356 aa24.99■■□□□ 1.59
CHMP6-201ENST00000325167 NALCNQ8IZF0 1738 aa24.99■■□□□ 1.59
CHMP6-201ENST00000325167 CALD1Q05682 793 aaKnown RBP24.98■■□□□ 1.59
CHMP6-201ENST00000325167 NGDNQ8NEJ9 315 aaKnown RBP24.98■■□□□ 1.59
CHMP6-201ENST00000325167 FMN2Q9NZ56 1722 aa24.98■■□□□ 1.59
CHMP6-201ENST00000325167 ZRANB1Q9UGI0 708 aa24.97■■□□□ 1.59
CHMP6-201ENST00000325167 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
CHMP6-201ENST00000325167 RIPK4P57078 832 aa24.97■■□□□ 1.59
CHMP6-201ENST00000325167 TRIM35Q9UPQ4 493 aa24.97■■□□□ 1.59
CHMP6-201ENST00000325167 RBM19Q9Y4C8 960 aaKnown RBP24.97■■□□□ 1.59
CHMP6-201ENST00000325167 PRKAR2BP31323 418 aa24.96■■□□□ 1.59
CHMP6-201ENST00000325167 PROSER2Q86WR7 435 aaPredicted RBP24.96■■□□□ 1.59
CHMP6-201ENST00000325167 NUTM2FA1L443 756 aa24.95■■□□□ 1.58
CHMP6-201ENST00000325167 AAMPQ13685 434 aa24.95■■□□□ 1.58
CHMP6-201ENST00000325167 RARSP54136 660 aaKnown RBP24.94■■□□□ 1.58
CHMP6-201ENST00000325167 LMOD3Q0VAK6 560 aa24.94■■□□□ 1.58
CHMP6-201ENST00000325167 NFE2L2Q16236 605 aa24.94■■□□□ 1.58
CHMP6-201ENST00000325167 C20orf194Q5TEA3 1177 aa24.94■■□□□ 1.58
CHMP6-201ENST00000325167 BCAR3O75815 825 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms