RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 DLC1Q96QB1 1528 aa9.89□□□□□ -0.83
IFT88-201ENST00000319980 FBLN1P23142 703 aa9.89□□□□□ -0.83
IFT88-201ENST00000319980 ILDR1Q86SU0 546 aaPredicted RBP9.89□□□□□ -0.83
IFT88-201ENST00000319980 SLC26A8Q96RN1 970 aa9.89□□□□□ -0.83
IFT88-201ENST00000319980 PPM1GO15355 546 aaPredicted RBP9.88□□□□□ -0.83
IFT88-201ENST00000319980 NUDT16Q96DE0 195 aaKnown RBP9.88□□□□□ -0.83
IFT88-201ENST00000319980 NKTRP30414 1462 aaKnown RBP9.88□□□□□ -0.83
IFT88-201ENST00000319980 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.88□□□□□ -0.83
IFT88-201ENST00000319980 BCAR3O75815 825 aa9.88□□□□□ -0.83
IFT88-201ENST00000319980 EID1Q9Y6B2 187 aa9.88□□□□□ -0.83
IFT88-201ENST00000319980 CCDC61Q9Y6R9 512 aa9.88□□□□□ -0.83
IFT88-201ENST00000319980 NRXN3Q9Y4C0 1643 aa9.87□□□□□ -0.83
IFT88-201ENST00000319980 SIRT1Q96EB6 747 aa9.87□□□□□ -0.83
IFT88-201ENST00000319980 PPIP5K1Q6PFW1 1433 aa9.86□□□□□ -0.83
IFT88-201ENST00000319980 UBR1Q8IWV7 1749 aa9.86□□□□□ -0.83
IFT88-201ENST00000319980 ROBO2Q9HCK4 1378 aa9.86□□□□□ -0.83
IFT88-201ENST00000319980 FAM135BQ49AJ0 1406 aa9.86□□□□□ -0.83
IFT88-201ENST00000319980 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
IFT88-201ENST00000319980 DIAPH1O60610 1272 aaKnown RBP9.86□□□□□ -0.83
IFT88-201ENST00000319980 SHPRHQ149N8 1683 aa9.86□□□□□ -0.83
IFT88-201ENST00000319980 ADAMTS13Q76LX8 1427 aa9.86□□□□□ -0.83
IFT88-201ENST00000319980 SETD1AO15047 1707 aaKnown RBP9.86□□□□□ -0.83
IFT88-201ENST00000319980 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
IFT88-201ENST00000319980 NME9Q86XW9 330 aa9.85□□□□□ -0.83
IFT88-201ENST00000319980 WDR63Q8IWG1 891 aa9.85□□□□□ -0.83
IFT88-201ENST00000319980 TECPR2O15040 1411 aa9.85□□□□□ -0.83
IFT88-201ENST00000319980 CCDC27Q2M243 656 aa9.85□□□□□ -0.83
IFT88-201ENST00000319980 POLKQ9UBT6 870 aa9.85□□□□□ -0.83
IFT88-201ENST00000319980 PLEKHG1Q9ULL1 1385 aa9.85□□□□□ -0.83
IFT88-201ENST00000319980 ATP7BP35670 1465 aa9.85□□□□□ -0.83
IFT88-201ENST00000319980 PLEKHF1Q96S99 279 aa9.84□□□□□ -0.83
IFT88-201ENST00000319980 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
IFT88-201ENST00000319980 SLIT1O75093 1534 aa9.84□□□□□ -0.83
IFT88-201ENST00000319980 CPS1P31327 1500 aa9.84□□□□□ -0.83
IFT88-201ENST00000319980 THEMISQ8N1K5 641 aaPredicted RBP9.84□□□□□ -0.83
IFT88-201ENST00000319980 MAPK8IP3Q9UPT6 1336 aa9.84□□□□□ -0.83
IFT88-201ENST00000319980 CPSF1Q10570 1443 aaKnown RBP9.84□□□□□ -0.83
IFT88-201ENST00000319980 PRR36Q9H6K5 1346 aa9.84□□□□□ -0.84
IFT88-201ENST00000319980 ARHGAP23Q9P227 1491 aa9.83□□□□□ -0.84
IFT88-201ENST00000319980 PNPLA6Q8IY17 1366 aa9.83□□□□□ -0.84
IFT88-201ENST00000319980 TMPOP42166 694 aaKnown RBP9.83□□□□□ -0.84
IFT88-201ENST00000319980 AMOTL2Q9Y2J4 779 aa9.83□□□□□ -0.84
IFT88-201ENST00000319980 EMILIN1Q9Y6C2 1016 aa9.83□□□□□ -0.84
IFT88-201ENST00000319980 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
IFT88-201ENST00000319980 CANXP27824 592 aaKnown RBP9.82□□□□□ -0.84
IFT88-201ENST00000319980 COG3Q96JB2 828 aa9.82□□□□□ -0.84
IFT88-201ENST00000319980 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
IFT88-201ENST00000319980 CERKQ8TCT0 537 aa9.82□□□□□ -0.84
IFT88-201ENST00000319980 FRAT1Q92837 279 aaPredicted RBP9.82□□□□□ -0.84
IFT88-201ENST00000319980 MYH16Q9H6N6 1097 aa9.82□□□□□ -0.84
IFT88-201ENST00000319980 COL3A1P02461 1466 aaPredicted RBP9.82□□□□□ -0.84
IFT88-201ENST00000319980 HOMEZQ8IX15 550 aa9.81□□□□□ -0.84
IFT88-201ENST00000319980 RIPK4P57078 832 aa9.81□□□□□ -0.84
IFT88-201ENST00000319980 BCL2L13Q9BXK5 485 aa9.81□□□□□ -0.84
IFT88-201ENST00000319980 PNNQ9H307 717 aaKnown RBP9.81□□□□□ -0.84
IFT88-201ENST00000319980 TBX22Q9Y458 520 aa9.81□□□□□ -0.84
IFT88-201ENST00000319980 FANCIQ9NVI1 1328 aa9.81□□□□□ -0.84
IFT88-201ENST00000319980 FCHSD2O94868 740 aa9.81□□□□□ -0.84
IFT88-201ENST00000319980 RARSP54136 660 aaKnown RBP9.81□□□□□ -0.84
IFT88-201ENST00000319980 RRS1Q15050 365 aaKnown RBP9.81□□□□□ -0.84
IFT88-201ENST00000319980 TRIM35Q9UPQ4 493 aa9.81□□□□□ -0.84
IFT88-201ENST00000319980 HMOX1P09601 288 aa9.8□□□□□ -0.84
IFT88-201ENST00000319980 SKAP1Q86WV1 359 aa9.8□□□□□ -0.84
IFT88-201ENST00000319980 TSR2Q969E8 191 aaKnown RBP9.8□□□□□ -0.84
IFT88-201ENST00000319980 PTPRUQ92729 1446 aa9.8□□□□□ -0.84
IFT88-201ENST00000319980 ACEP12821 1306 aa9.8□□□□□ -0.84
IFT88-201ENST00000319980 PRKAR2BP31323 418 aa9.8□□□□□ -0.84
IFT88-201ENST00000319980 NEFMP07197 916 aa9.79□□□□□ -0.84
IFT88-201ENST00000319980 HSPA2P54652 639 aa9.79□□□□□ -0.84
IFT88-201ENST00000319980 TCERG1O14776 1098 aaKnown RBP9.79□□□□□ -0.84
IFT88-201ENST00000319980 PDE3AQ14432 1141 aa9.79□□□□□ -0.84
IFT88-201ENST00000319980 PANK1Q8TE04 598 aa9.79□□□□□ -0.84
IFT88-201ENST00000319980 COG6Q9Y2V7 657 aa9.79□□□□□ -0.84
IFT88-201ENST00000319980 PMFBP1Q8TBY8 1022 aa9.78□□□□□ -0.84
IFT88-201ENST00000319980 RSPH6AQ9H0K4 717 aa9.78□□□□□ -0.84
IFT88-201ENST00000319980 PHACTR3Q96KR7 559 aa9.78□□□□□ -0.84
IFT88-201ENST00000319980 PLEKHG3A1L390 1219 aa9.77□□□□□ -0.84
IFT88-201ENST00000319980 MSH5O43196 834 aa9.77□□□□□ -0.84
IFT88-201ENST00000319980 IL13P35225 146 aa9.77□□□□□ -0.84
IFT88-201ENST00000319980 CENPQQ7L2Z9 268 aaPredicted RBP9.77□□□□□ -0.84
IFT88-201ENST00000319980 TTC21BQ7Z4L5 1316 aa9.77□□□□□ -0.85
IFT88-201ENST00000319980 KDM2BQ8NHM5 1336 aa9.77□□□□□ -0.85
IFT88-201ENST00000319980 CDC42BPGQ6DT37 1551 aa9.77□□□□□ -0.85
IFT88-201ENST00000319980 KNDC1Q76NI1 1749 aa9.77□□□□□ -0.85
IFT88-201ENST00000319980 AATKQ6ZMQ8 1374 aa9.77□□□□□ -0.85
IFT88-201ENST00000319980 EXOSC9Q06265 439 aaKnown RBP9.77□□□□□ -0.85
IFT88-201ENST00000319980 ANKRD26Q9UPS8 1709 aa9.77□□□□□ -0.85
IFT88-201ENST00000319980 SOX12O15370 315 aa9.76□□□□□ -0.85
IFT88-201ENST00000319980 CLUAP1Q96AJ1 413 aa9.76□□□□□ -0.85
IFT88-201ENST00000319980 STRCP1A6NGW2 1772 aa9.76□□□□□ -0.85
IFT88-201ENST00000319980 ADGRB2O60241 1585 aa9.76□□□□□ -0.85
IFT88-201ENST00000319980 NWD1Q149M9 1564 aa9.76□□□□□ -0.85
IFT88-201ENST00000319980 KCNA6P17658 529 aa9.76□□□□□ -0.85
IFT88-201ENST00000319980 TNNQ9UQP3 1299 aa9.76□□□□□ -0.85
IFT88-201ENST00000319980 KIF20BQ96Q89 1820 aa9.76□□□□□ -0.85
IFT88-201ENST00000319980 NGDNQ8NEJ9 315 aaKnown RBP9.75□□□□□ -0.85
IFT88-201ENST00000319980 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.75□□□□□ -0.85
IFT88-201ENST00000319980 RLBP1P12271 317 aa9.75□□□□□ -0.85
IFT88-201ENST00000319980 PDE4AP27815 886 aa9.75□□□□□ -0.85
IFT88-201ENST00000319980 LAS1LQ9Y4W2 734 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms