RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 C19orf44Q9H6X5 657 aa16.84■□□□□ 0.29
PTPN6-201ENST00000318974 TTC21BQ7Z4L5 1316 aa16.84■□□□□ 0.29
PTPN6-201ENST00000318974 TMEM94Q12767 1356 aa16.84■□□□□ 0.29
PTPN6-201ENST00000318974 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
PTPN6-201ENST00000318974 NME9Q86XW9 330 aa16.84■□□□□ 0.29
PTPN6-201ENST00000318974 KIF20BQ96Q89 1820 aa16.83■□□□□ 0.29
PTPN6-201ENST00000318974 MTHFSP49914 203 aa16.82■□□□□ 0.28
PTPN6-201ENST00000318974 STRCP1A6NGW2 1772 aa16.82■□□□□ 0.28
PTPN6-201ENST00000318974 WDR43Q15061 677 aaKnown RBP eCLIP16.82■□□□□ 0.28
PTPN6-201ENST00000318974 PHF8Q9UPP1 1060 aa16.82■□□□□ 0.28
PTPN6-201ENST00000318974 INSRP06213 1382 aa16.82■□□□□ 0.28
PTPN6-201ENST00000318974 COG3Q96JB2 828 aa16.81■□□□□ 0.28
PTPN6-201ENST00000318974 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
PTPN6-201ENST00000318974 SSH2Q76I76 1423 aa16.81■□□□□ 0.28
PTPN6-201ENST00000318974 NRKQ7Z2Y5 1582 aa16.81■□□□□ 0.28
PTPN6-201ENST00000318974 CFAP53Q96M91 514 aa16.81■□□□□ 0.28
PTPN6-201ENST00000318974 TTC21AQ8NDW8 1320 aa16.81■□□□□ 0.28
PTPN6-201ENST00000318974 RGPD8O14715 1765 aaPredicted RBP16.81■□□□□ 0.28
PTPN6-201ENST00000318974 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
PTPN6-201ENST00000318974 ESCO1Q5FWF5 840 aa16.8■□□□□ 0.28
PTPN6-201ENST00000318974 PPP4R2Q9NY27 417 aa16.8■□□□□ 0.28
PTPN6-201ENST00000318974 ZRANB1Q9UGI0 708 aa16.8■□□□□ 0.28
PTPN6-201ENST00000318974 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
PTPN6-201ENST00000318974 DCCP43146 1447 aa16.79■□□□□ 0.28
PTPN6-201ENST00000318974 ATF3P18847 181 aa16.78■□□□□ 0.28
PTPN6-201ENST00000318974 ADAMTS8Q9UP79 889 aa16.78■□□□□ 0.28
PTPN6-201ENST00000318974 ZNF335Q9H4Z2 1342 aaPredicted RBP16.78■□□□□ 0.28
PTPN6-201ENST00000318974 BLMP54132 1417 aaPredicted RBP16.76■□□□□ 0.27
PTPN6-201ENST00000318974 MSH6P52701 1360 aa16.76■□□□□ 0.27
PTPN6-201ENST00000318974 C1orf167Q5SNV9 1468 aa16.76■□□□□ 0.27
PTPN6-201ENST00000318974 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
PTPN6-201ENST00000318974 OVOS2A0A0J9YW53 1432 aa16.75■□□□□ 0.27
PTPN6-201ENST00000318974 OVOS2Q6IE36 1432 aa16.75■□□□□ 0.27
PTPN6-201ENST00000318974 CADPS2Q86UW7 1296 aa16.75■□□□□ 0.27
PTPN6-201ENST00000318974 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
PTPN6-201ENST00000318974 LRRC7Q96NW7 1537 aa16.75■□□□□ 0.27
PTPN6-201ENST00000318974 RNF123Q5XPI4 1314 aa16.74■□□□□ 0.27
PTPN6-201ENST00000318974 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
PTPN6-201ENST00000318974 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
PTPN6-201ENST00000318974 MST1RQ04912 1400 aa16.74■□□□□ 0.27
PTPN6-201ENST00000318974 FBLN1P23142 703 aa16.73■□□□□ 0.27
PTPN6-201ENST00000318974 PSME1Q06323 249 aa16.73■□□□□ 0.27
PTPN6-201ENST00000318974 PNPLA6Q8IY17 1366 aa16.72■□□□□ 0.27
PTPN6-201ENST00000318974 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
PTPN6-201ENST00000318974 COL3A1P02461 1466 aaPredicted RBP16.7■□□□□ 0.26
PTPN6-201ENST00000318974 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
PTPN6-201ENST00000318974 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
PTPN6-201ENST00000318974 FOXO3O43524 673 aa16.7■□□□□ 0.26
PTPN6-201ENST00000318974 ABTB2Q8N961 1025 aa16.7■□□□□ 0.26
PTPN6-201ENST00000318974 EMILIN1Q9Y6C2 1016 aa16.7■□□□□ 0.26
PTPN6-201ENST00000318974 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
PTPN6-201ENST00000318974 NLRP6P59044 892 aa16.69■□□□□ 0.26
PTPN6-201ENST00000318974 KIF1AQ12756 1690 aa16.69■□□□□ 0.26
PTPN6-201ENST00000318974 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
PTPN6-201ENST00000318974 RRS1Q15050 365 aaKnown RBP16.69■□□□□ 0.26
PTPN6-201ENST00000318974 PIK3C2AO00443 1686 aa16.68■□□□□ 0.26
PTPN6-201ENST00000318974 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
PTPN6-201ENST00000318974 XIRP1Q702N8 1843 aaKnown RBP16.67■□□□□ 0.26
PTPN6-201ENST00000318974 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
PTPN6-201ENST00000318974 RBM19Q9Y4C8 960 aaKnown RBP16.67■□□□□ 0.26
PTPN6-201ENST00000318974 CDK12Q9NYV4 1490 aaPredicted RBP16.67■□□□□ 0.26
PTPN6-201ENST00000318974 KRT28Q7Z3Y7 464 aa16.66■□□□□ 0.26
PTPN6-201ENST00000318974 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
PTPN6-201ENST00000318974 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTPN6-201ENST00000318974 NUTM2GQ5VZR2 741 aa16.66■□□□□ 0.26
PTPN6-201ENST00000318974 SALL2Q9Y467 1007 aaPredicted RBP16.66■□□□□ 0.26
PTPN6-201ENST00000318974 U2SURPO15042 1029 aaKnown RBP16.65■□□□□ 0.26
PTPN6-201ENST00000318974 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
PTPN6-201ENST00000318974 SOX12O15370 315 aa16.64■□□□□ 0.25
PTPN6-201ENST00000318974 MAP2P11137 1827 aaKnown RBP16.64■□□□□ 0.25
PTPN6-201ENST00000318974 USP54Q70EL1 1684 aa16.64■□□□□ 0.25
PTPN6-201ENST00000318974 RUNDC1Q96C34 613 aa16.64■□□□□ 0.25
PTPN6-201ENST00000318974 NPHP3Q7Z494 1330 aa16.63■□□□□ 0.25
PTPN6-201ENST00000318974 APAF1O14727 1248 aa16.62■□□□□ 0.25
PTPN6-201ENST00000318974 B4GALNT3Q6L9W6 998 aa16.62■□□□□ 0.25
PTPN6-201ENST00000318974 MAP3K19Q56UN5 1328 aa16.61■□□□□ 0.25
PTPN6-201ENST00000318974 IL13P35225 146 aa16.61■□□□□ 0.25
PTPN6-201ENST00000318974 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
PTPN6-201ENST00000318974 SLAIN2Q9P270 581 aa16.61■□□□□ 0.25
PTPN6-201ENST00000318974 BRINP3Q76B58 766 aa16.6■□□□□ 0.25
PTPN6-201ENST00000318974 SBNO1A3KN83 1393 aa16.6■□□□□ 0.25
PTPN6-201ENST00000318974 LMOD2Q6P5Q4 547 aa16.6■□□□□ 0.25
PTPN6-201ENST00000318974 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
PTPN6-201ENST00000318974 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
PTPN6-201ENST00000318974 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
PTPN6-201ENST00000318974 AMPHP49418 695 aa16.59■□□□□ 0.25
PTPN6-201ENST00000318974 KCNH5Q8NCM2 988 aa16.59■□□□□ 0.25
PTPN6-201ENST00000318974 DDX17Q92841 729 aaKnown RBP16.59■□□□□ 0.25
PTPN6-201ENST00000318974 FLT4P35916 1363 aa16.58■□□□□ 0.25
PTPN6-201ENST00000318974 KIF24Q5T7B8 1368 aa16.58■□□□□ 0.25
PTPN6-201ENST00000318974 FCHSD2O94868 740 aa16.57■□□□□ 0.24
PTPN6-201ENST00000318974 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
PTPN6-201ENST00000318974 HSP90AB2PQ58FF8 381 aa16.57■□□□□ 0.24
PTPN6-201ENST00000318974 TCP11L2Q8N4U5 519 aa16.57■□□□□ 0.24
PTPN6-201ENST00000318974 PLEKHF1Q96S99 279 aa16.57■□□□□ 0.24
PTPN6-201ENST00000318974 PEAK1Q9H792 1746 aa16.57■□□□□ 0.24
PTPN6-201ENST00000318974 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
PTPN6-201ENST00000318974 LTBP4Q8N2S1 1624 aa16.56■□□□□ 0.24
PTPN6-201ENST00000318974 USP19O94966 1318 aa16.56■□□□□ 0.24
PTPN6-201ENST00000318974 ZNF521Q96K83 1311 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms