RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 KIAA1211Q6ZU35 1233 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
RPGR-201ENST00000318842 RNF214Q8ND24 703 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 CHD1LQ86WJ1 897 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 TSC1Q92574 1164 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 PHACTR3Q96KR7 559 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 DDX49Q9Y6V7 483 aaKnown RBP12.04□□□□□ -0.48
RPGR-201ENST00000318842 PTPRTO14522 1441 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 POLR3AO14802 1390 aaPredicted RBP12.04□□□□□ -0.48
RPGR-201ENST00000318842 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 CFAP53Q96M91 514 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 ZBTB40Q9NUA8 1239 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
RPGR-201ENST00000318842 NSFL1CQ9UNZ2 370 aaKnown RBP12.04□□□□□ -0.48
RPGR-201ENST00000318842 FAM177BA6PVY3 158 aa12.03□□□□□ -0.48
RPGR-201ENST00000318842 FAM13BQ9NYF5 915 aa12.03□□□□□ -0.48
RPGR-201ENST00000318842 WDR63Q8IWG1 891 aa12.03□□□□□ -0.48
RPGR-201ENST00000318842 PHF23Q9BUL5 403 aaPredicted RBP12.03□□□□□ -0.48
RPGR-201ENST00000318842 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.48
RPGR-201ENST00000318842 KDM5AP29375 1690 aaKnown RBP12.02□□□□□ -0.48
RPGR-201ENST00000318842 SOX12O15370 315 aa12.02□□□□□ -0.49
RPGR-201ENST00000318842 SHPRHQ149N8 1683 aa12.02□□□□□ -0.49
RPGR-201ENST00000318842 PRDM10Q9NQV6 1147 aa12.02□□□□□ -0.49
RPGR-201ENST00000318842 R3HCC1Q9Y3T6 440 aaKnown RBP12.02□□□□□ -0.49
RPGR-201ENST00000318842 NASPP49321 788 aaPredicted RBP12.01□□□□□ -0.49
RPGR-201ENST00000318842 DUOX2Q9NRD8 1548 aa12.01□□□□□ -0.49
RPGR-201ENST00000318842 PRKAR2BP31323 418 aa12.01□□□□□ -0.49
RPGR-201ENST00000318842 DDIT3P35638 169 aa12.01□□□□□ -0.49
RPGR-201ENST00000318842 NUCB1Q02818 461 aa12.01□□□□□ -0.49
RPGR-201ENST00000318842 SMC5Q8IY18 1101 aa12.01□□□□□ -0.49
RPGR-201ENST00000318842 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
RPGR-201ENST00000318842 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
RPGR-201ENST00000318842 IQSEC2Q5JU85 1478 aa12.01□□□□□ -0.49
RPGR-201ENST00000318842 GSPT1P15170 499 aaKnown RBP12□□□□□ -0.49
RPGR-201ENST00000318842 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
RPGR-201ENST00000318842 DDX11L8A8MPP1 907 aa12□□□□□ -0.49
RPGR-201ENST00000318842 PLEKHF1Q96S99 279 aa12□□□□□ -0.49
RPGR-201ENST00000318842 ABCA6Q8N139 1617 aa12□□□□□ -0.49
RPGR-201ENST00000318842 RAB3GAP1Q15042 981 aa12□□□□□ -0.49
RPGR-201ENST00000318842 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
RPGR-201ENST00000318842 LAMC1P11047 1609 aa12□□□□□ -0.49
RPGR-201ENST00000318842 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
RPGR-201ENST00000318842 PRPF40AO75400 957 aaKnown RBP11.99□□□□□ -0.49
RPGR-201ENST00000318842 RBSNQ9H1K0 784 aa11.99□□□□□ -0.49
RPGR-201ENST00000318842 ZNF428Q96B54 188 aa11.98□□□□□ -0.49
RPGR-201ENST00000318842 ZNF518AQ6AHZ1 1483 aa11.98□□□□□ -0.49
RPGR-201ENST00000318842 BAG4O95429 457 aaKnown RBP11.98□□□□□ -0.49
RPGR-201ENST00000318842 HDAC1Q13547 482 aaPredicted RBP11.98□□□□□ -0.49
RPGR-201ENST00000318842 C17orf53Q8N3J3 647 aaPredicted RBP11.98□□□□□ -0.49
RPGR-201ENST00000318842 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
RPGR-201ENST00000318842 K7ELQ4 463 aaPredicted RBP11.97□□□□□ -0.49
RPGR-201ENST00000318842 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
RPGR-201ENST00000318842 MIS18AQ9NYP9 233 aa11.97□□□□□ -0.49
RPGR-201ENST00000318842 ZNF830Q96NB3 372 aaPredicted RBP11.97□□□□□ -0.49
RPGR-201ENST00000318842 EMILIN1Q9Y6C2 1016 aa11.97□□□□□ -0.49
RPGR-201ENST00000318842 NPC1L1Q9UHC9 1359 aa11.97□□□□□ -0.49
RPGR-201ENST00000318842 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
RPGR-201ENST00000318842 C8orf58Q8NAV2 365 aa11.97□□□□□ -0.49
RPGR-201ENST00000318842 A0A1W2PP64 1363 aa11.96□□□□□ -0.49
RPGR-201ENST00000318842 FYB1O15117 783 aa11.96□□□□□ -0.49
RPGR-201ENST00000318842 GBP4Q96PP9 640 aa11.96□□□□□ -0.49
RPGR-201ENST00000318842 RBM25P49756 843 aaKnown RBP11.96□□□□□ -0.5
RPGR-201ENST00000318842 SPHKAPQ2M3C7 1700 aa11.96□□□□□ -0.5
RPGR-201ENST00000318842 SYCE3A1L190 88 aa11.95□□□□□ -0.5
RPGR-201ENST00000318842 ZBTB7BO15156 539 aaPredicted RBP11.95□□□□□ -0.5
RPGR-201ENST00000318842 RRS1Q15050 365 aaKnown RBP11.95□□□□□ -0.5
RPGR-201ENST00000318842 TRPM2O94759 1503 aa11.95□□□□□ -0.5
RPGR-201ENST00000318842 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
RPGR-201ENST00000318842 CABP1Q9NZU7 370 aa11.95□□□□□ -0.5
RPGR-201ENST00000318842 PLCH2O75038 1416 aa11.94□□□□□ -0.5
RPGR-201ENST00000318842 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
RPGR-201ENST00000318842 PRAM1Q96QH2 718 aa11.94□□□□□ -0.5
RPGR-201ENST00000318842 MROH2AA6NES4 1674 aa11.94□□□□□ -0.5
RPGR-201ENST00000318842 ZSCAN23Q3MJ62 389 aa11.94□□□□□ -0.5
RPGR-201ENST00000318842 GPT2Q8TD30 523 aa11.94□□□□□ -0.5
RPGR-201ENST00000318842 KANK1Q14678 1352 aa11.94□□□□□ -0.5
RPGR-201ENST00000318842 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
RPGR-201ENST00000318842 DIAPH1O60610 1272 aaKnown RBP11.93□□□□□ -0.5
RPGR-201ENST00000318842 MBIPQ9NS73 344 aa11.93□□□□□ -0.5
RPGR-201ENST00000318842 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.93□□□□□ -0.5
RPGR-201ENST00000318842 RRP9O43818 475 aaKnown RBP11.92□□□□□ -0.5
RPGR-201ENST00000318842 C14orf93Q9H972 538 aaKnown RBP11.92□□□□□ -0.5
RPGR-201ENST00000318842 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
RPGR-201ENST00000318842 RAPGEF3O95398 923 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 MSNP26038 577 aaKnown RBP11.91□□□□□ -0.5
RPGR-201ENST00000318842 GLIPR1L2Q4G1C9 344 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 BMP2KLQ5H9B9 411 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 TMEM63CQ9P1W3 806 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 ZDHHC9Q9Y397 364 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 VAMP4O75379 141 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 CCDC27Q2M243 656 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 NCOA3Q9Y6Q9 1424 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 F6X3S4 739 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 PLEKHM2Q8IWE5 1019 aa11.91□□□□□ -0.5
RPGR-201ENST00000318842 EVC2Q86UK5 1308 aa11.9□□□□□ -0.5
RPGR-201ENST00000318842 SLC4A10Q6U841 1118 aa11.9□□□□□ -0.5
RPGR-201ENST00000318842 AEBP1Q8IUX7 1158 aa11.9□□□□□ -0.5
RPGR-201ENST00000318842 LMBRD1Q9NUN5 540 aa11.9□□□□□ -0.5
RPGR-201ENST00000318842 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.5
RPGR-201ENST00000318842 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms