RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 EPS15P42566 896 aa22.69■■□□□ 1.22
UBE2N-201ENST00000318066 CAGE1Q8TC20 777 aa22.69■■□□□ 1.22
UBE2N-201ENST00000318066 ODF2Q5BJF6 829 aa22.69■■□□□ 1.22
UBE2N-201ENST00000318066 SURF6O75683 361 aaKnown RBP22.69■■□□□ 1.22
UBE2N-201ENST00000318066 DACH1Q9UI36 760 aa22.69■■□□□ 1.22
UBE2N-201ENST00000318066 CALRP27797 417 aaKnown RBP22.68■■□□□ 1.22
UBE2N-201ENST00000318066 NECTIN2Q92692 538 aa22.68■■□□□ 1.22
UBE2N-201ENST00000318066 SRCIN1Q9C0H9 1055 aa22.68■■□□□ 1.22
UBE2N-201ENST00000318066 GNAI2P04899 355 aa22.68■■□□□ 1.22
UBE2N-201ENST00000318066 PDILTQ8N807 584 aa22.68■■□□□ 1.22
UBE2N-201ENST00000318066 RNF214Q8ND24 703 aa22.68■■□□□ 1.22
UBE2N-201ENST00000318066 KIF21BO75037 1637 aa22.68■■□□□ 1.22
UBE2N-201ENST00000318066 LUC7LQ9NQ29 371 aaKnown RBP22.67■■□□□ 1.22
UBE2N-201ENST00000318066 CCT4P50991 539 aaKnown RBP22.67■■□□□ 1.22
UBE2N-201ENST00000318066 PRPF40AO75400 957 aaKnown RBP22.67■■□□□ 1.22
UBE2N-201ENST00000318066 GGNBP2Q9H3C7 697 aa22.67■■□□□ 1.22
UBE2N-201ENST00000318066 SMG6Q86US8 1419 aaKnown RBP22.67■■□□□ 1.22
UBE2N-201ENST00000318066 HMOX1P09601 288 aa22.66■■□□□ 1.22
UBE2N-201ENST00000318066 H0YHG0 523 aa22.66■■□□□ 1.22
UBE2N-201ENST00000318066 BRPF3Q9ULD4 1205 aa22.66■■□□□ 1.22
UBE2N-201ENST00000318066 NCOA2Q15596 1464 aa22.65■■□□□ 1.22
UBE2N-201ENST00000318066 PATL2C9JE40 543 aaKnown RBP22.65■■□□□ 1.22
UBE2N-201ENST00000318066 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
UBE2N-201ENST00000318066 K7ELQ4 463 aaPredicted RBP22.65■■□□□ 1.22
UBE2N-201ENST00000318066 MAGEC2Q9UBF1 373 aaPredicted RBP22.65■■□□□ 1.22
UBE2N-201ENST00000318066 SLC3A2P08195 630 aaKnown RBP22.64■■□□□ 1.22
UBE2N-201ENST00000318066 TWISTNBQ3B726 338 aaPredicted RBP22.64■■□□□ 1.22
UBE2N-201ENST00000318066 LEKR1Q6ZMV7 388 aa22.64■■□□□ 1.22
UBE2N-201ENST00000318066 STK38Q15208 465 aa22.64■■□□□ 1.21
UBE2N-201ENST00000318066 CYP46A1Q9Y6A2 500 aa22.64■■□□□ 1.21
UBE2N-201ENST00000318066 SMC2O95347 1197 aa22.63■■□□□ 1.21
UBE2N-201ENST00000318066 ZNHIT6Q9NWK9 470 aaKnown RBP22.63■■□□□ 1.21
UBE2N-201ENST00000318066 KRT85P78386 507 aa22.63■■□□□ 1.21
UBE2N-201ENST00000318066 EXOSC9Q06265 439 aaKnown RBP22.63■■□□□ 1.21
UBE2N-201ENST00000318066 RBM33Q96EV2 1170 aaKnown RBP22.63■■□□□ 1.21
UBE2N-201ENST00000318066 FGD5Q6ZNL6 1462 aa22.63■■□□□ 1.21
UBE2N-201ENST00000318066 ZSCAN31Q96LW9 406 aaPredicted RBP22.62■■□□□ 1.21
UBE2N-201ENST00000318066 RAD21O60216 631 aa22.62■■□□□ 1.21
UBE2N-201ENST00000318066 CBFA2T2O43439 604 aa22.61■■□□□ 1.21
UBE2N-201ENST00000318066 ERLIN1O75477 346 aa22.61■■□□□ 1.21
UBE2N-201ENST00000318066 PLEKHO1Q53GL0 409 aaPredicted RBP22.61■■□□□ 1.21
UBE2N-201ENST00000318066 UBE2Q2Q8WVN8 375 aa22.61■■□□□ 1.21
UBE2N-201ENST00000318066 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
UBE2N-201ENST00000318066 FBXW7Q969H0 707 aa22.6■■□□□ 1.21
UBE2N-201ENST00000318066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.6■■□□□ 1.21
UBE2N-201ENST00000318066 ERLIN2O94905 339 aa22.6■■□□□ 1.21
UBE2N-201ENST00000318066 CCDC112Q8NEF3 446 aa22.6■■□□□ 1.21
UBE2N-201ENST00000318066 GRPEL1Q9HAV7 217 aa22.59■■□□□ 1.21
UBE2N-201ENST00000318066 PDCL2Q8N4E4 241 aa22.59■■□□□ 1.21
UBE2N-201ENST00000318066 CDCA7LQ96GN5 454 aa22.59■■□□□ 1.21
UBE2N-201ENST00000318066 RRP9O43818 475 aaKnown RBP22.58■■□□□ 1.21
UBE2N-201ENST00000318066 EIF3JO75822 258 aaKnown RBP22.58■■□□□ 1.21
UBE2N-201ENST00000318066 PRKAR2BP31323 418 aa22.58■■□□□ 1.21
UBE2N-201ENST00000318066 HSP90AB2PQ58FF8 381 aa22.58■■□□□ 1.21
UBE2N-201ENST00000318066 FIBPO43427 364 aa22.58■■□□□ 1.21
UBE2N-201ENST00000318066 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.58■■□□□ 1.21
UBE2N-201ENST00000318066 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.2
UBE2N-201ENST00000318066 STIM1Q13586 685 aa22.58■■□□□ 1.2
UBE2N-201ENST00000318066 LRRCC1Q9C099 1032 aa22.58■■□□□ 1.2
UBE2N-201ENST00000318066 ATF7IPQ6VMQ6 1270 aa22.57■■□□□ 1.2
UBE2N-201ENST00000318066 MVPQ14764 893 aaKnown RBP22.57■■□□□ 1.2
UBE2N-201ENST00000318066 TNMDQ9H2S6 317 aa22.57■■□□□ 1.2
UBE2N-201ENST00000318066 ZNF692Q9BU19 519 aaPredicted RBP22.56■■□□□ 1.2
UBE2N-201ENST00000318066 TRIM22Q8IYM9 498 aa22.56■■□□□ 1.2
UBE2N-201ENST00000318066 KIAA1107Q9UPP5 1409 aa22.56■■□□□ 1.2
UBE2N-201ENST00000318066 CCDC27Q2M243 656 aa22.56■■□□□ 1.2
UBE2N-201ENST00000318066 CABP2Q9NPB3 220 aa22.56■■□□□ 1.2
UBE2N-201ENST00000318066 FOSBP53539 338 aa22.56■■□□□ 1.2
UBE2N-201ENST00000318066 NLRP6P59044 892 aa22.56■■□□□ 1.2
UBE2N-201ENST00000318066 CCAR1Q8IX12 1150 aaKnown RBP22.56■■□□□ 1.2
UBE2N-201ENST00000318066 CFAP45Q9UL16 551 aa22.56■■□□□ 1.2
UBE2N-201ENST00000318066 PLEKHH2Q8IVE3 1493 aa22.56■■□□□ 1.2
UBE2N-201ENST00000318066 KRT32Q14532 448 aa22.55■■□□□ 1.2
UBE2N-201ENST00000318066 PPFIBP1Q86W92 1011 aa22.55■■□□□ 1.2
UBE2N-201ENST00000318066 GPRASP1Q5JY77 1395 aa22.55■■□□□ 1.2
UBE2N-201ENST00000318066 CCDC158Q5M9N0 1113 aa22.55■■□□□ 1.2
UBE2N-201ENST00000318066 CDK5RAP3Q96JB5 506 aa22.55■■□□□ 1.2
UBE2N-201ENST00000318066 KIF2AO00139 706 aaPredicted RBP22.55■■□□□ 1.2
UBE2N-201ENST00000318066 AIMP1Q12904 312 aaKnown RBP22.55■■□□□ 1.2
UBE2N-201ENST00000318066 RPAP2Q8IXW5 612 aaPredicted RBP22.54■■□□□ 1.2
UBE2N-201ENST00000318066 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
UBE2N-201ENST00000318066 IQCEQ6IPM2 695 aa22.54■■□□□ 1.2
UBE2N-201ENST00000318066 ZSCAN25Q6NSZ9 544 aa22.54■■□□□ 1.2
UBE2N-201ENST00000318066 NCAPD3P42695 1498 aa22.53■■□□□ 1.2
UBE2N-201ENST00000318066 CDKL5O76039 1030 aa22.53■■□□□ 1.2
UBE2N-201ENST00000318066 MCM4P33991 863 aa22.53■■□□□ 1.2
UBE2N-201ENST00000318066 SERPINC1P01008 464 aa22.53■■□□□ 1.2
UBE2N-201ENST00000318066 NLRP2Q9NX02 1062 aa22.53■■□□□ 1.2
UBE2N-201ENST00000318066 NOB1Q9ULX3 412 aaKnown RBP22.53■■□□□ 1.2
UBE2N-201ENST00000318066 GOLGA6L10A6NI86 522 aa22.53■■□□□ 1.2
UBE2N-201ENST00000318066 NACAP1Q9BZK3 213 aa22.53■■□□□ 1.2
UBE2N-201ENST00000318066 GNL3LQ9NVN8 582 aaKnown RBP22.52■■□□□ 1.2
UBE2N-201ENST00000318066 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
UBE2N-201ENST00000318066 CEP57L1Q8IYX8 460 aa22.52■■□□□ 1.2
UBE2N-201ENST00000318066 CHD1LQ86WJ1 897 aa22.52■■□□□ 1.2
UBE2N-201ENST00000318066 GOLGA6L7A0A1B0GV03 622 aa22.51■■□□□ 1.19
UBE2N-201ENST00000318066 AXDND1Q5T1B0 1012 aaPredicted RBP22.51■■□□□ 1.19
UBE2N-201ENST00000318066 ZRSR2Q15696 482 aaKnown RBP22.51■■□□□ 1.19
UBE2N-201ENST00000318066 ESPNB1AK53 854 aa22.51■■□□□ 1.19
UBE2N-201ENST00000318066 ATF3P18847 181 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms