RNA–Protein interactions for RNA: ENST00000314583.7

HCLS1-201, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCLS1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-201ENST00000314583 NCBP3Q53F19 620 aaKnown RBP24.27■■□□□ 1.48
HCLS1-201ENST00000314583 CCDC136Q96JN2 1154 aa24.27■■□□□ 1.48
HCLS1-201ENST00000314583 GGNBP2Q9H3C7 697 aa24.27■■□□□ 1.48
HCLS1-201ENST00000314583 E9PSI1 815 aa24.27■■□□□ 1.48
HCLS1-201ENST00000314583 CCDC61Q9Y6R9 512 aa24.27■■□□□ 1.48
HCLS1-201ENST00000314583 COL3A1P02461 1466 aaPredicted RBP24.26■■□□□ 1.47
HCLS1-201ENST00000314583 NKTRP30414 1462 aaKnown RBP24.25■■□□□ 1.47
HCLS1-201ENST00000314583 ANKLE2Q86XL3 938 aa24.23■■□□□ 1.47
HCLS1-201ENST00000314583 CHD2O14647 1828 aaKnown RBP24.22■■□□□ 1.47
HCLS1-201ENST00000314583 NRKQ7Z2Y5 1582 aa24.22■■□□□ 1.47
HCLS1-201ENST00000314583 NCKAP5LQ9HCH0 1330 aa24.21■■□□□ 1.47
HCLS1-201ENST00000314583 WWC1Q8IX03 1113 aa24.2■■□□□ 1.46
HCLS1-201ENST00000314583 CCDC27Q2M243 656 aa24.19■■□□□ 1.46
HCLS1-201ENST00000314583 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.19■■□□□ 1.46
HCLS1-201ENST00000314583 EXOC6Q8TAG9 804 aa24.19■■□□□ 1.46
HCLS1-201ENST00000314583 PNPLA6Q8IY17 1366 aa24.18■■□□□ 1.46
HCLS1-201ENST00000314583 TCP11L2Q8N4U5 519 aa24.18■■□□□ 1.46
HCLS1-201ENST00000314583 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
HCLS1-201ENST00000314583 PLEKHG3A1L390 1219 aa24.17■■□□□ 1.46
HCLS1-201ENST00000314583 U2AF1L5P0DN76 240 aaPredicted RBP24.17■■□□□ 1.46
HCLS1-201ENST00000314583 U2AF1Q01081 240 aaKnown RBP eCLIP24.17■■□□□ 1.46
HCLS1-201ENST00000314583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.17■■□□□ 1.46
HCLS1-201ENST00000314583 ZNF692Q9BU19 519 aaPredicted RBP24.17■■□□□ 1.46
HCLS1-201ENST00000314583 KCNA6P17658 529 aa24.16■■□□□ 1.46
HCLS1-201ENST00000314583 WDR63Q8IWG1 891 aa24.15■■□□□ 1.46
HCLS1-201ENST00000314583 MAP2P11137 1827 aaKnown RBP24.14■■□□□ 1.46
HCLS1-201ENST00000314583 SPINK5Q9NQ38 1064 aaPredicted RBP24.14■■□□□ 1.45
HCLS1-201ENST00000314583 FMN2Q9NZ56 1722 aa24.14■■□□□ 1.45
HCLS1-201ENST00000314583 NPHP4O75161 1426 aaPredicted RBP24.13■■□□□ 1.45
HCLS1-201ENST00000314583 RBM19Q9Y4C8 960 aaKnown RBP24.13■■□□□ 1.45
HCLS1-201ENST00000314583 PLIN1O60240 522 aa24.12■■□□□ 1.45
HCLS1-201ENST00000314583 PNNQ9H307 717 aaKnown RBP24.12■■□□□ 1.45
HCLS1-201ENST00000314583 DIAPH1O60610 1272 aaKnown RBP24.11■■□□□ 1.45
HCLS1-201ENST00000314583 NME9Q86XW9 330 aa24.11■■□□□ 1.45
HCLS1-201ENST00000314583 ANKARQ7Z5J8 1434 aa24.11■■□□□ 1.45
HCLS1-201ENST00000314583 NALCNQ8IZF0 1738 aa24.11■■□□□ 1.45
HCLS1-201ENST00000314583 RGPD8O14715 1765 aaPredicted RBP24.11■■□□□ 1.45
HCLS1-201ENST00000314583 ACEP12821 1306 aa24.1■■□□□ 1.45
HCLS1-201ENST00000314583 AATKQ6ZMQ8 1374 aa24.1■■□□□ 1.45
HCLS1-201ENST00000314583 USP6P35125 1406 aa24.1■■□□□ 1.45
HCLS1-201ENST00000314583 DMRT2Q9Y5R5 561 aa24.1■■□□□ 1.45
HCLS1-201ENST00000314583 SSH2Q76I76 1423 aa24.09■■□□□ 1.45
HCLS1-201ENST00000314583 CRBNQ96SW2 442 aa24.09■■□□□ 1.45
HCLS1-201ENST00000314583 U2SURPO15042 1029 aaKnown RBP24.08■■□□□ 1.45
HCLS1-201ENST00000314583 CDK12Q9NYV4 1490 aaPredicted RBP24.08■■□□□ 1.45
HCLS1-201ENST00000314583 RRP7AQ9Y3A4 280 aaKnown RBP24.08■■□□□ 1.44
HCLS1-201ENST00000314583 TTC21BQ7Z4L5 1316 aa24.07■■□□□ 1.44
HCLS1-201ENST00000314583 NEUROD2Q15784 382 aa24.07■■□□□ 1.44
HCLS1-201ENST00000314583 PLEKHF1Q96S99 279 aa24.07■■□□□ 1.44
HCLS1-201ENST00000314583 NWD1Q149M9 1564 aa24.07■■□□□ 1.44
HCLS1-201ENST00000314583 MAPK8IP3Q9UPT6 1336 aa24.07■■□□□ 1.44
HCLS1-201ENST00000314583 POLKQ9UBT6 870 aa24.06■■□□□ 1.44
HCLS1-201ENST00000314583 ZRANB1Q9UGI0 708 aa24.06■■□□□ 1.44
HCLS1-201ENST00000314583 NUTM2FA1L443 756 aa24.05■■□□□ 1.44
HCLS1-201ENST00000314583 COG3Q96JB2 828 aa24.05■■□□□ 1.44
HCLS1-201ENST00000314583 OVOS2A0A0J9YW53 1432 aa24.04■■□□□ 1.44
HCLS1-201ENST00000314583 OVOS2Q6IE36 1432 aa24.04■■□□□ 1.44
HCLS1-201ENST00000314583 MYH16Q9H6N6 1097 aa24.03■■□□□ 1.44
HCLS1-201ENST00000314583 LRRC7Q96NW7 1537 aa24.03■■□□□ 1.44
HCLS1-201ENST00000314583 FCHSD2O94868 740 aa24.01■■□□□ 1.43
HCLS1-201ENST00000314583 TMPOP42166 694 aaKnown RBP24.01■■□□□ 1.43
HCLS1-201ENST00000314583 C20orf194Q5TEA3 1177 aa24.01■■□□□ 1.43
HCLS1-201ENST00000314583 ADGRL3Q9HAR2 1447 aa24■■□□□ 1.43
HCLS1-201ENST00000314583 FBLN1P23142 703 aa24■■□□□ 1.43
HCLS1-201ENST00000314583 TTC21AQ8NDW8 1320 aa23.99■■□□□ 1.43
HCLS1-201ENST00000314583 IL16Q14005 1332 aa23.98■■□□□ 1.43
HCLS1-201ENST00000314583 EMILIN1Q9Y6C2 1016 aa23.98■■□□□ 1.43
HCLS1-201ENST00000314583 USP31Q70CQ4 1352 aa23.97■■□□□ 1.43
HCLS1-201ENST00000314583 NEFMP07197 916 aa23.96■■□□□ 1.43
HCLS1-201ENST00000314583 CT47B1P0C2W7 299 aaPredicted RBP23.96■■□□□ 1.43
HCLS1-201ENST00000314583 PMFBP1Q8TBY8 1022 aa23.96■■□□□ 1.43
HCLS1-201ENST00000314583 USP54Q70EL1 1684 aa23.96■■□□□ 1.43
HCLS1-201ENST00000314583 BCAR3O75815 825 aa23.96■■□□□ 1.43
HCLS1-201ENST00000314583 PIK3C2AO00443 1686 aa23.95■■□□□ 1.43
HCLS1-201ENST00000314583 PPM1GO15355 546 aaPredicted RBP23.95■■□□□ 1.42
HCLS1-201ENST00000314583 PDE3AQ14432 1141 aa23.95■■□□□ 1.42
HCLS1-201ENST00000314583 RSPH6AQ9H0K4 717 aa23.94■■□□□ 1.42
HCLS1-201ENST00000314583 NGDNQ8NEJ9 315 aaKnown RBP23.93■■□□□ 1.42
HCLS1-201ENST00000314583 TRIM35Q9UPQ4 493 aa23.93■■□□□ 1.42
HCLS1-201ENST00000314583 IL13P35225 146 aa23.93■■□□□ 1.42
HCLS1-201ENST00000314583 RARSP54136 660 aaKnown RBP23.92■■□□□ 1.42
HCLS1-201ENST00000314583 FANCIQ9NVI1 1328 aa23.91■■□□□ 1.42
HCLS1-201ENST00000314583 PEAK1Q9H792 1746 aa23.91■■□□□ 1.42
HCLS1-201ENST00000314583 MARF1Q9Y4F3 1742 aaKnown RBP23.91■■□□□ 1.42
HCLS1-201ENST00000314583 RIPK4P57078 832 aa23.91■■□□□ 1.42
HCLS1-201ENST00000314583 TCERG1O14776 1098 aaKnown RBP23.9■■□□□ 1.42
HCLS1-201ENST00000314583 RRS1Q15050 365 aaKnown RBP23.9■■□□□ 1.42
HCLS1-201ENST00000314583 CANXP27824 592 aaKnown RBP23.89■■□□□ 1.42
HCLS1-201ENST00000314583 PRKAR2BP31323 418 aa23.89■■□□□ 1.42
HCLS1-201ENST00000314583 CENPQQ7L2Z9 268 aaPredicted RBP23.88■■□□□ 1.41
HCLS1-201ENST00000314583 KDM2BQ8NHM5 1336 aa23.87■■□□□ 1.41
HCLS1-201ENST00000314583 RBM33Q96EV2 1170 aaKnown RBP23.87■■□□□ 1.41
HCLS1-201ENST00000314583 NFE2L2Q16236 605 aa23.86■■□□□ 1.41
HCLS1-201ENST00000314583 MS4A1P11836 297 aa23.85■■□□□ 1.41
HCLS1-201ENST00000314583 AAMPQ13685 434 aa23.85■■□□□ 1.41
HCLS1-201ENST00000314583 PHF8Q9UPP1 1060 aa23.85■■□□□ 1.41
HCLS1-201ENST00000314583 CALD1Q05682 793 aaKnown RBP23.84■■□□□ 1.41
HCLS1-201ENST00000314583 RGPD1P0DJD0 1748 aa23.84■■□□□ 1.41
HCLS1-201ENST00000314583 STRCP1A6NGW2 1772 aa23.83■■□□□ 1.41
HCLS1-201ENST00000314583 DLG5Q8TDM6 1919 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms