RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 SBNO1A3KN83 1393 aa17.45■□□□□ 0.38
CHMP2A-201ENST00000312547 XPCQ01831 940 aaPredicted RBP17.45■□□□□ 0.38
CHMP2A-201ENST00000312547 AKAP12Q02952 1782 aa17.45■□□□□ 0.38
CHMP2A-201ENST00000312547 PER1O15534 1290 aaPredicted RBP17.44■□□□□ 0.38
CHMP2A-201ENST00000312547 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
CHMP2A-201ENST00000312547 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
CHMP2A-201ENST00000312547 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
CHMP2A-201ENST00000312547 NRKQ7Z2Y5 1582 aa17.43■□□□□ 0.38
CHMP2A-201ENST00000312547 NSD3Q9BZ95 1437 aa17.42■□□□□ 0.38
CHMP2A-201ENST00000312547 SPATA31A3Q5VYP0 1347 aa17.42■□□□□ 0.38
CHMP2A-201ENST00000312547 TRPM3Q9HCF6 1732 aaPredicted RBP17.41■□□□□ 0.38
CHMP2A-201ENST00000312547 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
CHMP2A-201ENST00000312547 COL16A1Q07092 1604 aaPredicted RBP17.4■□□□□ 0.38
CHMP2A-201ENST00000312547 TNS3Q68CZ2 1445 aa17.4■□□□□ 0.38
CHMP2A-201ENST00000312547 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
CHMP2A-201ENST00000312547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHMP2A-201ENST00000312547 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
CHMP2A-201ENST00000312547 FYB1O15117 783 aa17.37■□□□□ 0.37
CHMP2A-201ENST00000312547 PAK3O75914 559 aaPredicted RBP17.37■□□□□ 0.37
CHMP2A-201ENST00000312547 KNSTRNQ9Y448 316 aa17.37■□□□□ 0.37
CHMP2A-201ENST00000312547 PHLPP1O60346 1717 aa17.37■□□□□ 0.37
CHMP2A-201ENST00000312547 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
CHMP2A-201ENST00000312547 ALS2Q96Q42 1657 aa17.36■□□□□ 0.37
CHMP2A-201ENST00000312547 NME9Q86XW9 330 aa17.36■□□□□ 0.37
CHMP2A-201ENST00000312547 RGS17Q9UGC6 210 aaPredicted RBP17.36■□□□□ 0.37
CHMP2A-201ENST00000312547 CGNL1Q0VF96 1302 aa17.36■□□□□ 0.37
CHMP2A-201ENST00000312547 ARHGEF10O15013 1369 aa17.36■□□□□ 0.37
CHMP2A-201ENST00000312547 NPC1L1Q9UHC9 1359 aa17.36■□□□□ 0.37
CHMP2A-201ENST00000312547 ABTB2Q8N961 1025 aa17.35■□□□□ 0.37
CHMP2A-201ENST00000312547 OVOS2A0A0J9YW53 1432 aa17.34■□□□□ 0.37
CHMP2A-201ENST00000312547 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
CHMP2A-201ENST00000312547 OVOS2Q6IE36 1432 aa17.34■□□□□ 0.37
CHMP2A-201ENST00000312547 PNPLA6Q8IY17 1366 aa17.34■□□□□ 0.37
CHMP2A-201ENST00000312547 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
CHMP2A-201ENST00000312547 ZRANB1Q9UGI0 708 aa17.34■□□□□ 0.37
CHMP2A-201ENST00000312547 NSD2O96028 1365 aa17.33■□□□□ 0.36
CHMP2A-201ENST00000312547 USP19O94966 1318 aa17.33■□□□□ 0.36
CHMP2A-201ENST00000312547 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
CHMP2A-201ENST00000312547 JCADQ9P266 1359 aa17.31■□□□□ 0.36
CHMP2A-201ENST00000312547 NLRP6P59044 892 aa17.31■□□□□ 0.36
CHMP2A-201ENST00000312547 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
CHMP2A-201ENST00000312547 LMOD2Q6P5Q4 547 aa17.31■□□□□ 0.36
CHMP2A-201ENST00000312547 NLRP13Q86W25 1043 aa17.31■□□□□ 0.36
CHMP2A-201ENST00000312547 USP54Q70EL1 1684 aa17.31■□□□□ 0.36
CHMP2A-201ENST00000312547 COL22A1Q8NFW1 1626 aaPredicted RBP17.29■□□□□ 0.36
CHMP2A-201ENST00000312547 COG3Q96JB2 828 aa17.29■□□□□ 0.36
CHMP2A-201ENST00000312547 SLIT3O75094 1523 aa17.29■□□□□ 0.36
CHMP2A-201ENST00000312547 MARF1Q9Y4F3 1742 aaKnown RBP17.28■□□□□ 0.36
CHMP2A-201ENST00000312547 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
CHMP2A-201ENST00000312547 KIF20BQ96Q89 1820 aa17.27■□□□□ 0.36
CHMP2A-201ENST00000312547 CC2D1BQ5T0F9 858 aaKnown RBP17.27■□□□□ 0.36
CHMP2A-201ENST00000312547 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
CHMP2A-201ENST00000312547 CRYBG1Q9Y4K1 1723 aa17.25■□□□□ 0.35
CHMP2A-201ENST00000312547 GCP02774 474 aa17.25■□□□□ 0.35
CHMP2A-201ENST00000312547 SPATA31A6Q5VVP1 1343 aa17.24■□□□□ 0.35
CHMP2A-201ENST00000312547 MORC1Q86VD1 984 aa17.24■□□□□ 0.35
CHMP2A-201ENST00000312547 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
CHMP2A-201ENST00000312547 NFAT5O94916 1531 aa17.24■□□□□ 0.35
CHMP2A-201ENST00000312547 PARD3Q8TEW0 1356 aa17.24■□□□□ 0.35
CHMP2A-201ENST00000312547 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
CHMP2A-201ENST00000312547 AATKQ6ZMQ8 1374 aa17.23■□□□□ 0.35
CHMP2A-201ENST00000312547 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
CHMP2A-201ENST00000312547 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
CHMP2A-201ENST00000312547 CPDO75976 1380 aa17.21■□□□□ 0.35
CHMP2A-201ENST00000312547 PLEKHG5O94827 1062 aa17.21■□□□□ 0.35
CHMP2A-201ENST00000312547 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
CHMP2A-201ENST00000312547 FBLN1P23142 703 aa17.2■□□□□ 0.34
CHMP2A-201ENST00000312547 RALBP1Q15311 655 aa17.2■□□□□ 0.34
CHMP2A-201ENST00000312547 ARHGEF25Q86VW2 580 aa17.2■□□□□ 0.34
CHMP2A-201ENST00000312547 PRKRIP1Q9H875 184 aaPredicted RBP17.2■□□□□ 0.34
CHMP2A-201ENST00000312547 LRP6O75581 1613 aa17.19■□□□□ 0.34
CHMP2A-201ENST00000312547 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
CHMP2A-201ENST00000312547 SOX12O15370 315 aa17.18■□□□□ 0.34
CHMP2A-201ENST00000312547 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
CHMP2A-201ENST00000312547 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
CHMP2A-201ENST00000312547 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 NUTM2BA6NNL0 878 aaPredicted RBP17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 NUTM2EB1AL46 878 aaPredicted RBP17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 HAP1P54257 671 aaPredicted RBP17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 ZC3H6P61129 1189 aaKnown RBP17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 RRS1Q15050 365 aaKnown RBP17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 DIEXFQ68CQ4 756 aaKnown RBP17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 SMG6Q86US8 1419 aaKnown RBP17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 NUTM2AQ8IVF1 878 aaPredicted RBP17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 POLKQ9UBT6 870 aa17.17■□□□□ 0.34
CHMP2A-201ENST00000312547 PPP2R1AP30153 589 aa17.16■□□□□ 0.34
CHMP2A-201ENST00000312547 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
CHMP2A-201ENST00000312547 ANP32CO43423 234 aa17.15■□□□□ 0.34
CHMP2A-201ENST00000312547 EMILIN1Q9Y6C2 1016 aa17.15■□□□□ 0.34
CHMP2A-201ENST00000312547 FAM83GA6ND36 823 aa17.14■□□□□ 0.33
CHMP2A-201ENST00000312547 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
CHMP2A-201ENST00000312547 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
CHMP2A-201ENST00000312547 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
CHMP2A-201ENST00000312547 ABCC6O95255 1503 aa17.13■□□□□ 0.33
CHMP2A-201ENST00000312547 MYBBP1AQ9BQG0 1328 aaKnown RBP17.13■□□□□ 0.33
CHMP2A-201ENST00000312547 MTHFSP49914 203 aa17.12■□□□□ 0.33
CHMP2A-201ENST00000312547 CHRNA2Q15822 529 aa17.12■□□□□ 0.33
CHMP2A-201ENST00000312547 IP6K1Q92551 441 aa17.12■□□□□ 0.33
CHMP2A-201ENST00000312547 HOXC9P31274 260 aa17.11■□□□□ 0.33
CHMP2A-201ENST00000312547 INSRP06213 1382 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms