RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 FGD1P98174 961 aa7.67□□□□□ -1.18
SEC22A-201ENST00000309934 WDR63Q8IWG1 891 aa7.67□□□□□ -1.18
SEC22A-201ENST00000309934 TTC21BQ7Z4L5 1316 aa7.67□□□□□ -1.18
SEC22A-201ENST00000309934 PPM1GO15355 546 aaPredicted RBP7.67□□□□□ -1.18
SEC22A-201ENST00000309934 HSP90AA1P07900 732 aaKnown RBP7.67□□□□□ -1.18
SEC22A-201ENST00000309934 BRD2P25440 801 aaKnown RBP7.67□□□□□ -1.18
SEC22A-201ENST00000309934 ANP32AP39687 249 aaKnown RBP7.67□□□□□ -1.18
SEC22A-201ENST00000309934 PROSER2Q86WR7 435 aaPredicted RBP7.67□□□□□ -1.18
SEC22A-201ENST00000309934 C11orf95C9JLR9 678 aaPredicted RBP7.67□□□□□ -1.18
SEC22A-201ENST00000309934 PPLO60437 1756 aa7.67□□□□□ -1.18
SEC22A-201ENST00000309934 ANKARQ7Z5J8 1434 aa7.67□□□□□ -1.18
SEC22A-201ENST00000309934 FCHSD2O94868 740 aa7.66□□□□□ -1.18
SEC22A-201ENST00000309934 SLC12A5Q9H2X9 1139 aa7.66□□□□□ -1.18
SEC22A-201ENST00000309934 CABP1Q9NZU7 370 aa7.66□□□□□ -1.18
SEC22A-201ENST00000309934 RBM19Q9Y4C8 960 aaKnown RBP7.66□□□□□ -1.18
SEC22A-201ENST00000309934 ALKQ9UM73 1620 aa7.66□□□□□ -1.18
SEC22A-201ENST00000309934 MYO3AQ8NEV4 1616 aa7.66□□□□□ -1.18
SEC22A-201ENST00000309934 MED14O60244 1454 aa7.65□□□□□ -1.18
SEC22A-201ENST00000309934 NKTRP30414 1462 aaKnown RBP7.65□□□□□ -1.18
SEC22A-201ENST00000309934 TMEM131LA2VDJ0 1609 aa7.65□□□□□ -1.18
SEC22A-201ENST00000309934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.65□□□□□ -1.18
SEC22A-201ENST00000309934 KCNA6P17658 529 aa7.65□□□□□ -1.19
SEC22A-201ENST00000309934 PPIP5K1Q6PFW1 1433 aa7.65□□□□□ -1.19
SEC22A-201ENST00000309934 PAK3O75914 559 aaPredicted RBP7.64□□□□□ -1.19
SEC22A-201ENST00000309934 GNAI1P63096 354 aa7.64□□□□□ -1.19
SEC22A-201ENST00000309934 PTCH1Q13635 1447 aa7.64□□□□□ -1.19
SEC22A-201ENST00000309934 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
SEC22A-201ENST00000309934 SUPT16HQ9Y5B9 1047 aaKnown RBP7.64□□□□□ -1.19
SEC22A-201ENST00000309934 TECPR2O15040 1411 aa7.64□□□□□ -1.19
SEC22A-201ENST00000309934 PER1O15534 1290 aaPredicted RBP7.64□□□□□ -1.19
SEC22A-201ENST00000309934 CADPS2Q86UW7 1296 aa7.64□□□□□ -1.19
SEC22A-201ENST00000309934 FTSJ3Q8IY81 847 aaKnown RBP7.64□□□□□ -1.19
SEC22A-201ENST00000309934 KIF13AQ9H1H9 1805 aa7.64□□□□□ -1.19
SEC22A-201ENST00000309934 MTHFSP49914 203 aa7.64□□□□□ -1.19
SEC22A-201ENST00000309934 KIF24Q5T7B8 1368 aa7.64□□□□□ -1.19
SEC22A-201ENST00000309934 PLEKHG3A1L390 1219 aa7.63□□□□□ -1.19
SEC22A-201ENST00000309934 IL16Q14005 1332 aa7.63□□□□□ -1.19
SEC22A-201ENST00000309934 HMGB2P26583 209 aaKnown RBP7.63□□□□□ -1.19
SEC22A-201ENST00000309934 NPHP4O75161 1426 aaPredicted RBP7.63□□□□□ -1.19
SEC22A-201ENST00000309934 DCAF8L1A6NGE4 600 aa7.63□□□□□ -1.19
SEC22A-201ENST00000309934 CCDC27Q2M243 656 aa7.63□□□□□ -1.19
SEC22A-201ENST00000309934 APPP05067 770 aa7.63□□□□□ -1.19
SEC22A-201ENST00000309934 SLC26A8Q96RN1 970 aa7.63□□□□□ -1.19
SEC22A-201ENST00000309934 QRICH2Q9H0J4 1663 aa7.62□□□□□ -1.19
SEC22A-201ENST00000309934 UPF2Q9HAU5 1272 aaKnown RBP7.62□□□□□ -1.19
SEC22A-201ENST00000309934 PHF8Q9UPP1 1060 aa7.62□□□□□ -1.19
SEC22A-201ENST00000309934 SLIT1O75093 1534 aa7.62□□□□□ -1.19
SEC22A-201ENST00000309934 FER1L4A9Z1Z3 1794 aa7.62□□□□□ -1.19
SEC22A-201ENST00000309934 CEBPAP49715 358 aaPredicted RBP7.62□□□□□ -1.19
SEC22A-201ENST00000309934 MSH6P52701 1360 aa7.62□□□□□ -1.19
SEC22A-201ENST00000309934 NCOA3Q9Y6Q9 1424 aa7.62□□□□□ -1.19
SEC22A-201ENST00000309934 PMFBP1Q8TBY8 1022 aa7.62□□□□□ -1.19
SEC22A-201ENST00000309934 AATKQ6ZMQ8 1374 aa7.61□□□□□ -1.19
SEC22A-201ENST00000309934 KIF16BQ96L93 1317 aa7.61□□□□□ -1.19
SEC22A-201ENST00000309934 GGNBP2Q9H3C7 697 aa7.61□□□□□ -1.19
SEC22A-201ENST00000309934 IL27Q8NEV9 243 aa7.61□□□□□ -1.19
SEC22A-201ENST00000309934 NLRP6P59044 892 aa7.61□□□□□ -1.19
SEC22A-201ENST00000309934 LMOD2Q6P5Q4 547 aa7.61□□□□□ -1.19
SEC22A-201ENST00000309934 ADAMTS8Q9UP79 889 aa7.61□□□□□ -1.19
SEC22A-201ENST00000309934 ADGRB1O14514 1584 aa7.6□□□□□ -1.19
SEC22A-201ENST00000309934 PTMSP20962 102 aa7.6□□□□□ -1.19
SEC22A-201ENST00000309934 WAPLQ7Z5K2 1190 aa7.6□□□□□ -1.19
SEC22A-201ENST00000309934 SENP3Q9H4L4 574 aaPredicted RBP7.6□□□□□ -1.19
SEC22A-201ENST00000309934 C19orf44Q9H6X5 657 aa7.6□□□□□ -1.19
SEC22A-201ENST00000309934 SOS1Q07889 1333 aaPredicted RBP7.6□□□□□ -1.19
SEC22A-201ENST00000309934 A0A1W2PP64 1363 aa7.6□□□□□ -1.19
SEC22A-201ENST00000309934 USP32Q8NFA0 1604 aa7.6□□□□□ -1.19
SEC22A-201ENST00000309934 ABTB2Q8N961 1025 aa7.6□□□□□ -1.19
SEC22A-201ENST00000309934 BLMP54132 1417 aaPredicted RBP7.6□□□□□ -1.19
SEC22A-201ENST00000309934 CEP170BQ9Y4F5 1589 aaPredicted RBP7.6□□□□□ -1.19
SEC22A-201ENST00000309934 ARHGAP23Q9P227 1491 aa7.59□□□□□ -1.19
SEC22A-201ENST00000309934 APAF1O14727 1248 aa7.59□□□□□ -1.19
SEC22A-201ENST00000309934 RRP1P56182 461 aaKnown RBP7.59□□□□□ -1.19
SEC22A-201ENST00000309934 ESCO1Q5FWF5 840 aa7.59□□□□□ -1.19
SEC22A-201ENST00000309934 BBXQ8WY36 941 aaPredicted RBP7.59□□□□□ -1.19
SEC22A-201ENST00000309934 STK31Q9BXU1 1019 aa7.59□□□□□ -1.19
SEC22A-201ENST00000309934 USP35Q9P2H5 1018 aa7.59□□□□□ -1.19
SEC22A-201ENST00000309934 HTATSF1O43719 755 aaKnown RBP7.59□□□□□ -1.19
SEC22A-201ENST00000309934 C1orf141Q5JVX7 400 aa7.59□□□□□ -1.19
SEC22A-201ENST00000309934 CPS1P31327 1500 aa7.59□□□□□ -1.19
SEC22A-201ENST00000309934 TULP4Q9NRJ4 1543 aa7.59□□□□□ -1.19
SEC22A-201ENST00000309934 IRX6P78412 446 aaPredicted RBP7.59□□□□□ -1.19
SEC22A-201ENST00000309934 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
SEC22A-201ENST00000309934 API5Q9BZZ5 524 aaKnown RBP7.59□□□□□ -1.19
SEC22A-201ENST00000309934 NPHP3Q7Z494 1330 aa7.58□□□□□ -1.2
SEC22A-201ENST00000309934 HSP90AB1P08238 724 aaKnown RBP7.58□□□□□ -1.2
SEC22A-201ENST00000309934 PLEKHO1Q53GL0 409 aaPredicted RBP7.58□□□□□ -1.2
SEC22A-201ENST00000309934 RWDD1Q9H446 243 aaPredicted RBP7.58□□□□□ -1.2
SEC22A-201ENST00000309934 ACEP12821 1306 aa7.58□□□□□ -1.2
SEC22A-201ENST00000309934 RIPK4P57078 832 aa7.58□□□□□ -1.2
SEC22A-201ENST00000309934 PDE3AQ14432 1141 aa7.58□□□□□ -1.2
SEC22A-201ENST00000309934 CSB-PGBD3P0DP91 1061 aa7.58□□□□□ -1.2
SEC22A-201ENST00000309934 TCP11L2Q8N4U5 519 aa7.58□□□□□ -1.2
SEC22A-201ENST00000309934 CFAP65Q6ZU64 1925 aaKnown RBP7.58□□□□□ -1.2
SEC22A-201ENST00000309934 AMOTQ4VCS5 1084 aa7.57□□□□□ -1.2
SEC22A-201ENST00000309934 PTPRMP28827 1452 aa7.57□□□□□ -1.2
SEC22A-201ENST00000309934 RTL1A6NKG5 1358 aa7.57□□□□□ -1.2
SEC22A-201ENST00000309934 ZBTB7CA1YPR0 619 aa7.57□□□□□ -1.2
SEC22A-201ENST00000309934 PATL2C9JE40 543 aaKnown RBP7.57□□□□□ -1.2
SEC22A-201ENST00000309934 FYB1O15117 783 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms