RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TBX22Q9Y458 520 aa13.39□□□□□ -0.27
APOBEC3F-201ENST00000308521 ARHGAP23Q9P227 1491 aa13.39□□□□□ -0.27
APOBEC3F-201ENST00000308521 FYB1O15117 783 aa13.39□□□□□ -0.27
APOBEC3F-201ENST00000308521 MTHFSP49914 203 aa13.39□□□□□ -0.27
APOBEC3F-201ENST00000308521 HDGFL2Q7Z4V5 671 aaPredicted RBP13.39□□□□□ -0.27
APOBEC3F-201ENST00000308521 SLIT1O75093 1534 aa13.39□□□□□ -0.27
APOBEC3F-201ENST00000308521 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
APOBEC3F-201ENST00000308521 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
APOBEC3F-201ENST00000308521 KCNA6P17658 529 aa13.38□□□□□ -0.27
APOBEC3F-201ENST00000308521 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
APOBEC3F-201ENST00000308521 CD163L1Q9NR16 1453 aa13.38□□□□□ -0.27
APOBEC3F-201ENST00000308521 CEP170BQ9Y4F5 1589 aaPredicted RBP13.38□□□□□ -0.27
APOBEC3F-201ENST00000308521 CRBNQ96SW2 442 aa13.37□□□□□ -0.27
APOBEC3F-201ENST00000308521 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
APOBEC3F-201ENST00000308521 PRR36Q9H6K5 1346 aa13.37□□□□□ -0.27
APOBEC3F-201ENST00000308521 ADAMTSL3P82987 1691 aa13.37□□□□□ -0.27
APOBEC3F-201ENST00000308521 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
APOBEC3F-201ENST00000308521 MED14O60244 1454 aa13.36□□□□□ -0.27
APOBEC3F-201ENST00000308521 CCDC61Q9Y6R9 512 aa13.36□□□□□ -0.27
APOBEC3F-201ENST00000308521 PPIP5K1Q6PFW1 1433 aa13.36□□□□□ -0.27
APOBEC3F-201ENST00000308521 SIRT1Q96EB6 747 aa13.36□□□□□ -0.27
APOBEC3F-201ENST00000308521 TECPR2O15040 1411 aa13.35□□□□□ -0.27
APOBEC3F-201ENST00000308521 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
APOBEC3F-201ENST00000308521 KDM2BQ8NHM5 1336 aa13.35□□□□□ -0.27
APOBEC3F-201ENST00000308521 PMFBP1Q8TBY8 1022 aa13.34□□□□□ -0.27
APOBEC3F-201ENST00000308521 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
APOBEC3F-201ENST00000308521 PLIN1O60240 522 aa13.34□□□□□ -0.27
APOBEC3F-201ENST00000308521 NME9Q86XW9 330 aa13.34□□□□□ -0.27
APOBEC3F-201ENST00000308521 SETD1BQ9UPS6 1966 aaKnown RBP13.34□□□□□ -0.27
APOBEC3F-201ENST00000308521 CENPQQ7L2Z9 268 aaPredicted RBP13.33□□□□□ -0.28
APOBEC3F-201ENST00000308521 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.32□□□□□ -0.28
APOBEC3F-201ENST00000308521 CPS1P31327 1500 aa13.32□□□□□ -0.28
APOBEC3F-201ENST00000308521 APAF1O14727 1248 aa13.32□□□□□ -0.28
APOBEC3F-201ENST00000308521 FAM43AQ8N2R8 423 aa13.32□□□□□ -0.28
APOBEC3F-201ENST00000308521 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
APOBEC3F-201ENST00000308521 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
APOBEC3F-201ENST00000308521 ACEP12821 1306 aa13.3□□□□□ -0.28
APOBEC3F-201ENST00000308521 HSPA2P54652 639 aa13.3□□□□□ -0.28
APOBEC3F-201ENST00000308521 KNDC1Q76NI1 1749 aa13.29□□□□□ -0.28
APOBEC3F-201ENST00000308521 POLR3AO14802 1390 aaPredicted RBP13.29□□□□□ -0.28
APOBEC3F-201ENST00000308521 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
APOBEC3F-201ENST00000308521 RRP7AQ9Y3A4 280 aaKnown RBP13.29□□□□□ -0.28
APOBEC3F-201ENST00000308521 SOX12O15370 315 aa13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 GSE1Q14687 1217 aa13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 FAM161AQ3B820 660 aa13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 ATP7BP35670 1465 aa13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 ZNF521Q96K83 1311 aa13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 DUSP27Q5VZP5 1158 aa13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 CFAP53Q96M91 514 aa13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 NSD2O96028 1365 aa13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
APOBEC3F-201ENST00000308521 NFKBIBQ15653 356 aa13.27□□□□□ -0.28
APOBEC3F-201ENST00000308521 C20orf194Q5TEA3 1177 aa13.27□□□□□ -0.28
APOBEC3F-201ENST00000308521 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
APOBEC3F-201ENST00000308521 EMILIN1Q9Y6C2 1016 aa13.26□□□□□ -0.29
APOBEC3F-201ENST00000308521 C14orf37Q86TY3 774 aa13.26□□□□□ -0.29
APOBEC3F-201ENST00000308521 NGDNQ8NEJ9 315 aaKnown RBP13.26□□□□□ -0.29
APOBEC3F-201ENST00000308521 USP32Q8NFA0 1604 aa13.26□□□□□ -0.29
APOBEC3F-201ENST00000308521 ZBTB22O15209 634 aa13.25□□□□□ -0.29
APOBEC3F-201ENST00000308521 C8orf34Q49A92 452 aa13.25□□□□□ -0.29
APOBEC3F-201ENST00000308521 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
APOBEC3F-201ENST00000308521 GOLGA2Q08379 1002 aa13.25□□□□□ -0.29
APOBEC3F-201ENST00000308521 SKAP1Q86WV1 359 aa13.25□□□□□ -0.29
APOBEC3F-201ENST00000308521 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
APOBEC3F-201ENST00000308521 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
APOBEC3F-201ENST00000308521 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
APOBEC3F-201ENST00000308521 COG3Q96JB2 828 aa13.24□□□□□ -0.29
APOBEC3F-201ENST00000308521 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3F-201ENST00000308521 NPHP4O75161 1426 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3F-201ENST00000308521 KDM4FA0A1W2PPD8 638 aa13.24□□□□□ -0.29
APOBEC3F-201ENST00000308521 PLEKHG3A1L390 1219 aa13.24□□□□□ -0.29
APOBEC3F-201ENST00000308521 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
APOBEC3F-201ENST00000308521 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
APOBEC3F-201ENST00000308521 EDC4Q6P2E9 1401 aaKnown RBP13.23□□□□□ -0.29
APOBEC3F-201ENST00000308521 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
APOBEC3F-201ENST00000308521 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
APOBEC3F-201ENST00000308521 TCP11L2Q8N4U5 519 aa13.23□□□□□ -0.29
APOBEC3F-201ENST00000308521 SLFN5Q08AF3 891 aa13.22□□□□□ -0.29
APOBEC3F-201ENST00000308521 ZMYND15Q9H091 742 aa13.22□□□□□ -0.29
APOBEC3F-201ENST00000308521 ZNF142P52746 1687 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3F-201ENST00000308521 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
APOBEC3F-201ENST00000308521 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
APOBEC3F-201ENST00000308521 DIP2AQ14689 1571 aa13.22□□□□□ -0.29
APOBEC3F-201ENST00000308521 CDC42BPGQ6DT37 1551 aa13.22□□□□□ -0.29
APOBEC3F-201ENST00000308521 DIAPH1O60610 1272 aaKnown RBP13.21□□□□□ -0.3
APOBEC3F-201ENST00000308521 RUNDC1Q96C34 613 aa13.21□□□□□ -0.3
APOBEC3F-201ENST00000308521 PIK3R4Q99570 1358 aa13.21□□□□□ -0.3
APOBEC3F-201ENST00000308521 XRN1Q8IZH2 1706 aaKnown RBP13.2□□□□□ -0.3
APOBEC3F-201ENST00000308521 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
APOBEC3F-201ENST00000308521 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
APOBEC3F-201ENST00000308521 HMOX1P09601 288 aa13.19□□□□□ -0.3
APOBEC3F-201ENST00000308521 PROSER2Q86WR7 435 aaPredicted RBP13.19□□□□□ -0.3
APOBEC3F-201ENST00000308521 VIRMAQ69YN4 1812 aaKnown RBP13.19□□□□□ -0.3
APOBEC3F-201ENST00000308521 KIF20BQ96Q89 1820 aa13.19□□□□□ -0.3
APOBEC3F-201ENST00000308521 ESCO1Q5FWF5 840 aa13.19□□□□□ -0.3
APOBEC3F-201ENST00000308521 FRAT1Q92837 279 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms