RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 XPCQ01831 940 aaPredicted RBP23.42■■□□□ 1.34
CHRNB1-201ENST00000306071 CAVIN1Q6NZI2 390 aaKnown RBP23.42■■□□□ 1.34
CHRNB1-201ENST00000306071 NOL7Q9UMY1 257 aaKnown RBP23.42■■□□□ 1.34
CHRNB1-201ENST00000306071 CLEC17AQ6ZS10 378 aa23.42■■□□□ 1.34
CHRNB1-201ENST00000306071 CLTCL1P53675 1640 aa23.41■■□□□ 1.34
CHRNB1-201ENST00000306071 ZNF445P59923 1031 aa23.41■■□□□ 1.34
CHRNB1-201ENST00000306071 MCTP1Q6DN14 999 aa23.41■■□□□ 1.34
CHRNB1-201ENST00000306071 PODXL2Q9NZ53 605 aa23.41■■□□□ 1.34
CHRNB1-201ENST00000306071 ZNF500O60304 480 aaPredicted RBP23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 ARID3AQ99856 593 aa23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 ZNF518AQ6AHZ1 1483 aa23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 KIAA1210Q9ULL0 1709 aa23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 ZSCAN23Q3MJ62 389 aa23.4■■□□□ 1.34
CHRNB1-201ENST00000306071 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
CHRNB1-201ENST00000306071 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.34
CHRNB1-201ENST00000306071 AK9Q5TCS8 1911 aa23.38■■□□□ 1.33
CHRNB1-201ENST00000306071 TBC1D9Q6ZT07 1266 aa23.38■■□□□ 1.33
CHRNB1-201ENST00000306071 ANKRD45Q5TZF3 282 aa23.38■■□□□ 1.33
CHRNB1-201ENST00000306071 NCBP3Q53F19 620 aaKnown RBP23.37■■□□□ 1.33
CHRNB1-201ENST00000306071 RBSNQ9H1K0 784 aa23.37■■□□□ 1.33
CHRNB1-201ENST00000306071 PTPRTO14522 1441 aa23.36■■□□□ 1.33
CHRNB1-201ENST00000306071 IPO8O15397 1037 aaKnown RBP23.36■■□□□ 1.33
CHRNB1-201ENST00000306071 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.36■■□□□ 1.33
CHRNB1-201ENST00000306071 ADGRF5Q8IZF2 1346 aa23.35■■□□□ 1.33
CHRNB1-201ENST00000306071 CSPP1Q1MSJ5 1256 aa23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 MTERF4Q7Z6M4 381 aaKnown RBP23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 PDLIM2Q96JY6 352 aa23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 CFAP74Q9C0B2 1584 aa23.34■■□□□ 1.33
CHRNB1-201ENST00000306071 KIF16BQ96L93 1317 aa23.33■■□□□ 1.33
CHRNB1-201ENST00000306071 DYNC1I1O14576 645 aa23.33■■□□□ 1.32
CHRNB1-201ENST00000306071 PRIM1P49642 420 aaKnown RBP23.33■■□□□ 1.32
CHRNB1-201ENST00000306071 ZKSCAN5Q9Y2L8 839 aa23.33■■□□□ 1.32
CHRNB1-201ENST00000306071 NUCB2P80303 420 aa23.32■■□□□ 1.32
CHRNB1-201ENST00000306071 LMBRD1Q9NUN5 540 aa23.32■■□□□ 1.32
CHRNB1-201ENST00000306071 ABCA6Q8N139 1617 aa23.32■■□□□ 1.32
CHRNB1-201ENST00000306071 SMAP1Q8IYB5 467 aaPredicted RBP23.3■■□□□ 1.32
CHRNB1-201ENST00000306071 U2SURPO15042 1029 aaKnown RBP23.3■■□□□ 1.32
CHRNB1-201ENST00000306071 MAP3K4Q9Y6R4 1608 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 ADGRL1O94910 1474 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 NOS1P29475 1434 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 TMPOP42166 694 aaKnown RBP23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 GCC1Q96CN9 775 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 ARHGAP31Q2M1Z3 1444 aa23.29■■□□□ 1.32
CHRNB1-201ENST00000306071 ADGRB2O60241 1585 aa23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 TRIM35Q9UPQ4 493 aa23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 PRPF40AO75400 957 aaKnown RBP23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 MCM5P33992 734 aa23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 RBM27Q9P2N5 1060 aaKnown RBP23.28■■□□□ 1.32
CHRNB1-201ENST00000306071 CDC45O75419 566 aa23.27■■□□□ 1.32
CHRNB1-201ENST00000306071 SASS6Q6UVJ0 657 aa23.27■■□□□ 1.32
CHRNB1-201ENST00000306071 TRAK1Q9UPV9 953 aa23.27■■□□□ 1.32
CHRNB1-201ENST00000306071 CCDC39Q9UFE4 941 aa23.27■■□□□ 1.32
CHRNB1-201ENST00000306071 RABEP1Q15276 862 aa23.26■■□□□ 1.31
CHRNB1-201ENST00000306071 PKP1Q13835 747 aa23.26■■□□□ 1.31
CHRNB1-201ENST00000306071 C1orf115Q9H7X2 142 aa23.26■■□□□ 1.31
CHRNB1-201ENST00000306071 PRDM10Q9NQV6 1147 aa23.25■■□□□ 1.31
CHRNB1-201ENST00000306071 CD109Q6YHK3 1445 aa23.25■■□□□ 1.31
CHRNB1-201ENST00000306071 MYOM2P54296 1465 aa23.24■■□□□ 1.31
CHRNB1-201ENST00000306071 PPIP5K1Q6PFW1 1433 aa23.24■■□□□ 1.31
CHRNB1-201ENST00000306071 CYP2E1P05181 493 aaPredicted RBP23.23■■□□□ 1.31
CHRNB1-201ENST00000306071 MYO3AQ8NEV4 1616 aa23.23■■□□□ 1.31
CHRNB1-201ENST00000306071 GPT2Q8TD30 523 aa23.23■■□□□ 1.31
CHRNB1-201ENST00000306071 PLEKHF1Q96S99 279 aa23.22■■□□□ 1.31
CHRNB1-201ENST00000306071 IL16Q14005 1332 aa23.22■■□□□ 1.31
CHRNB1-201ENST00000306071 EFCAB2Q5VUJ9 269 aa23.22■■□□□ 1.31
CHRNB1-201ENST00000306071 SPAG9O60271 1321 aaKnown RBP23.21■■□□□ 1.31
CHRNB1-201ENST00000306071 SYCE3A1L190 88 aa23.21■■□□□ 1.31
CHRNB1-201ENST00000306071 LRSAM1Q6UWE0 723 aa23.21■■□□□ 1.31
CHRNB1-201ENST00000306071 TRAPPC8Q9Y2L5 1435 aa23.21■■□□□ 1.31
CHRNB1-201ENST00000306071 ALDH1L2Q3SY69 923 aa23.2■■□□□ 1.3
CHRNB1-201ENST00000306071 ZBTB7BO15156 539 aaPredicted RBP23.2■■□□□ 1.3
CHRNB1-201ENST00000306071 CWC22Q9HCG8 908 aaKnown RBP23.2■■□□□ 1.3
CHRNB1-201ENST00000306071 TET3O43151 1660 aa23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 PTMAP06454 111 aaKnown RBP23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 ZHX1Q9UKY1 873 aaPredicted RBP23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 UGGT1Q9NYU2 1555 aa23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 USP32Q8NFA0 1604 aa23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 CHMP4BQ9H444 224 aaKnown RBP23.19■■□□□ 1.3
CHRNB1-201ENST00000306071 TMEM63CQ9P1W3 806 aa23.18■■□□□ 1.3
CHRNB1-201ENST00000306071 RNF214Q8ND24 703 aa23.18■■□□□ 1.3
CHRNB1-201ENST00000306071 CCDC94Q9BW85 323 aaPredicted RBP23.18■■□□□ 1.3
CHRNB1-201ENST00000306071 ZBTB7CA1YPR0 619 aa23.17■■□□□ 1.3
CHRNB1-201ENST00000306071 DNTTIP2Q5QJE6 756 aaKnown RBP23.16■■□□□ 1.3
CHRNB1-201ENST00000306071 ZGPATQ8N5A5 531 aaKnown RBP23.16■■□□□ 1.3
CHRNB1-201ENST00000306071 GSPT1P15170 499 aaKnown RBP23.16■■□□□ 1.3
CHRNB1-201ENST00000306071 KIAA2012Q0VF49 1180 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 QRICH2Q9H0J4 1663 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 A0A0U1RQG5 324 aaPredicted RBP23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 PLEKHG5O94827 1062 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 AFAP1Q8N556 730 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 MED14O60244 1454 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 NSD2O96028 1365 aa23.15■■□□□ 1.3
CHRNB1-201ENST00000306071 ST18O60284 1047 aa23.14■■□□□ 1.3
CHRNB1-201ENST00000306071 SIRT2Q8IXJ6 389 aa23.14■■□□□ 1.3
CHRNB1-201ENST00000306071 CHAMP1Q96JM3 812 aa23.14■■□□□ 1.29
CHRNB1-201ENST00000306071 USP26Q9BXU7 913 aa23.14■■□□□ 1.29
CHRNB1-201ENST00000306071 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms