RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 RNF123Q5XPI4 1314 aa29.19■■■□□ 2.26
NHLH1-201ENST00000302101 ZNF692Q9BU19 519 aaPredicted RBP29.17■■■□□ 2.26
NHLH1-201ENST00000302101 CFAP53Q96M91 514 aa29.17■■■□□ 2.26
NHLH1-201ENST00000302101 SHPRHQ149N8 1683 aa29.16■■■□□ 2.26
NHLH1-201ENST00000302101 CCDC146Q8IYE0 955 aa29.14■■■□□ 2.26
NHLH1-201ENST00000302101 RGPD8O14715 1765 aaPredicted RBP29.14■■■□□ 2.26
NHLH1-201ENST00000302101 ACEP12821 1306 aa29.14■■■□□ 2.26
NHLH1-201ENST00000302101 PLEKHG3A1L390 1219 aa29.14■■■□□ 2.26
NHLH1-201ENST00000302101 CCDC136Q96JN2 1154 aa29.14■■■□□ 2.26
NHLH1-201ENST00000302101 NME9Q86XW9 330 aa29.13■■■□□ 2.25
NHLH1-201ENST00000302101 NKTRP30414 1462 aaKnown RBP29.12■■■□□ 2.25
NHLH1-201ENST00000302101 RBM33Q96EV2 1170 aaKnown RBP29.1■■■□□ 2.25
NHLH1-201ENST00000302101 PMFBP1Q8TBY8 1022 aa29.08■■■□□ 2.25
NHLH1-201ENST00000302101 ZRANB1Q9UGI0 708 aa29.08■■■□□ 2.25
NHLH1-201ENST00000302101 PDE3BQ13370 1112 aa29.08■■■□□ 2.25
NHLH1-201ENST00000302101 NALCNQ8IZF0 1738 aa29.07■■■□□ 2.24
NHLH1-201ENST00000302101 FBLN1P23142 703 aa29.06■■■□□ 2.24
NHLH1-201ENST00000302101 FMN2Q9NZ56 1722 aa29.05■■■□□ 2.24
NHLH1-201ENST00000302101 MAP2P11137 1827 aaKnown RBP29.05■■■□□ 2.24
NHLH1-201ENST00000302101 APAF1O14727 1248 aa29.05■■■□□ 2.24
NHLH1-201ENST00000302101 CDCA7LQ96GN5 454 aa29.05■■■□□ 2.24
NHLH1-201ENST00000302101 KDM4FA0A1W2PPD8 638 aa29.04■■■□□ 2.24
NHLH1-201ENST00000302101 USP6P35125 1406 aa29.04■■■□□ 2.24
NHLH1-201ENST00000302101 NRKQ7Z2Y5 1582 aa29.04■■■□□ 2.24
NHLH1-201ENST00000302101 COG3Q96JB2 828 aa29.04■■■□□ 2.24
NHLH1-201ENST00000302101 TTC21BQ7Z4L5 1316 aa29.04■■■□□ 2.24
NHLH1-201ENST00000302101 ANKARQ7Z5J8 1434 aa29.02■■■□□ 2.24
NHLH1-201ENST00000302101 NGDNQ8NEJ9 315 aaKnown RBP29.02■■■□□ 2.24
NHLH1-201ENST00000302101 POLKQ9UBT6 870 aa29.01■■■□□ 2.23
NHLH1-201ENST00000302101 COL3A1P02461 1466 aaPredicted RBP29■■■□□ 2.23
NHLH1-201ENST00000302101 PPM1GO15355 546 aaPredicted RBP29■■■□□ 2.23
NHLH1-201ENST00000302101 U2AF1L5P0DN76 240 aaPredicted RBP28.99■■■□□ 2.23
NHLH1-201ENST00000302101 HSPA2P54652 639 aa28.99■■■□□ 2.23
NHLH1-201ENST00000302101 U2AF1Q01081 240 aaKnown RBP eCLIP28.99■■■□□ 2.23
NHLH1-201ENST00000302101 NWD1Q149M9 1564 aa28.97■■■□□ 2.23
NHLH1-201ENST00000302101 PNPLA6Q8IY17 1366 aa28.97■■■□□ 2.23
NHLH1-201ENST00000302101 C14orf37Q86TY3 774 aa28.97■■■□□ 2.23
NHLH1-201ENST00000302101 ADGRL3Q9HAR2 1447 aa28.97■■■□□ 2.23
NHLH1-201ENST00000302101 RUNDC1Q96C34 613 aa28.97■■■□□ 2.23
NHLH1-201ENST00000302101 U2SURPO15042 1029 aaKnown RBP28.96■■■□□ 2.23
NHLH1-201ENST00000302101 ZNF521Q96K83 1311 aa28.96■■■□□ 2.23
NHLH1-201ENST00000302101 SSH2Q76I76 1423 aa28.95■■■□□ 2.23
NHLH1-201ENST00000302101 DIAPH1O60610 1272 aaKnown RBP28.95■■■□□ 2.22
NHLH1-201ENST00000302101 EMILIN1Q9Y6C2 1016 aa28.95■■■□□ 2.22
NHLH1-201ENST00000302101 AATKQ6ZMQ8 1374 aa28.94■■■□□ 2.22
NHLH1-201ENST00000302101 RRP1P56182 461 aaKnown RBP28.94■■■□□ 2.22
NHLH1-201ENST00000302101 PROSER2Q86WR7 435 aaPredicted RBP28.92■■■□□ 2.22
NHLH1-201ENST00000302101 GOLGA2Q08379 1002 aa28.91■■■□□ 2.22
NHLH1-201ENST00000302101 TTC21AQ8NDW8 1320 aa28.91■■■□□ 2.22
NHLH1-201ENST00000302101 RRS1Q15050 365 aaKnown RBP28.91■■■□□ 2.22
NHLH1-201ENST00000302101 NGEFQ8N5V2 710 aa28.91■■■□□ 2.22
NHLH1-201ENST00000302101 TCP11L2Q8N4U5 519 aa28.9■■■□□ 2.22
NHLH1-201ENST00000302101 OVOS2A0A0J9YW53 1432 aa28.9■■■□□ 2.22
NHLH1-201ENST00000302101 OVOS2Q6IE36 1432 aa28.9■■■□□ 2.22
NHLH1-201ENST00000302101 RCAN3Q9UKA8 241 aa28.9■■■□□ 2.22
NHLH1-201ENST00000302101 NEUROD2Q15784 382 aa28.88■■■□□ 2.21
NHLH1-201ENST00000302101 NOP58Q9Y2X3 529 aaKnown RBP28.88■■■□□ 2.21
NHLH1-201ENST00000302101 PHF8Q9UPP1 1060 aa28.88■■■□□ 2.21
NHLH1-201ENST00000302101 RRP7AQ9Y3A4 280 aaKnown RBP28.88■■■□□ 2.21
NHLH1-201ENST00000302101 IQSEC2Q5JU85 1478 aa28.86■■■□□ 2.21
NHLH1-201ENST00000302101 EXOC6Q8TAG9 804 aa28.86■■■□□ 2.21
NHLH1-201ENST00000302101 CDK12Q9NYV4 1490 aaPredicted RBP28.86■■■□□ 2.21
NHLH1-201ENST00000302101 LMTK3Q96Q04 1460 aa28.85■■■□□ 2.21
NHLH1-201ENST00000302101 ESCO1Q5FWF5 840 aa28.85■■■□□ 2.21
NHLH1-201ENST00000302101 WWC1Q8IX03 1113 aa28.83■■■□□ 2.21
NHLH1-201ENST00000302101 DUSP27Q5VZP5 1158 aa28.83■■■□□ 2.21
NHLH1-201ENST00000302101 PIK3C2AO00443 1686 aa28.83■■■□□ 2.21
NHLH1-201ENST00000302101 STRCP1A6NGW2 1772 aa28.82■■■□□ 2.2
NHLH1-201ENST00000302101 SLFN5Q08AF3 891 aa28.82■■■□□ 2.2
NHLH1-201ENST00000302101 PLEKHF1Q96S99 279 aa28.82■■■□□ 2.2
NHLH1-201ENST00000302101 SOX12O15370 315 aa28.82■■■□□ 2.2
NHLH1-201ENST00000302101 ANP32AP39687 249 aaKnown RBP28.82■■■□□ 2.2
NHLH1-201ENST00000302101 USP31Q70CQ4 1352 aa28.81■■■□□ 2.2
NHLH1-201ENST00000302101 SPINK5Q9NQ38 1064 aaPredicted RBP28.81■■■□□ 2.2
NHLH1-201ENST00000302101 PAK3O75914 559 aaPredicted RBP28.8■■■□□ 2.2
NHLH1-201ENST00000302101 DMRT2Q9Y5R5 561 aa28.8■■■□□ 2.2
NHLH1-201ENST00000302101 IL13P35225 146 aa28.79■■■□□ 2.2
NHLH1-201ENST00000302101 NLRP6P59044 892 aa28.78■■■□□ 2.2
NHLH1-201ENST00000302101 C19orf44Q9H6X5 657 aa28.78■■■□□ 2.2
NHLH1-201ENST00000302101 MAPK8IP3Q9UPT6 1336 aa28.77■■■□□ 2.2
NHLH1-201ENST00000302101 TRMT2AQ8IZ69 625 aaKnown RBP28.77■■■□□ 2.2
NHLH1-201ENST00000302101 ORAI2Q96SN7 254 aa28.77■■■□□ 2.2
NHLH1-201ENST00000302101 PNNQ9H307 717 aaKnown RBP28.77■■■□□ 2.2
NHLH1-201ENST00000302101 STRCQ7RTU9 1775 aa28.77■■■□□ 2.2
NHLH1-201ENST00000302101 FCHSD2O94868 740 aa28.76■■■□□ 2.2
NHLH1-201ENST00000302101 NUTM2GQ5VZR2 741 aa28.76■■■□□ 2.2
NHLH1-201ENST00000302101 ABTB2Q8N961 1025 aa28.76■■■□□ 2.2
NHLH1-201ENST00000302101 E9PSI1 815 aa28.76■■■□□ 2.19
NHLH1-201ENST00000302101 TMEM94Q12767 1356 aa28.76■■■□□ 2.19
NHLH1-201ENST00000302101 PSME1Q06323 249 aa28.75■■■□□ 2.19
NHLH1-201ENST00000302101 PHF23Q9BUL5 403 aaPredicted RBP28.75■■■□□ 2.19
NHLH1-201ENST00000302101 CCDC27Q2M243 656 aa28.74■■■□□ 2.19
NHLH1-201ENST00000302101 HMOX1P09601 288 aa28.74■■■□□ 2.19
NHLH1-201ENST00000302101 LRRC7Q96NW7 1537 aa28.73■■■□□ 2.19
NHLH1-201ENST00000302101 RSPH6AQ9H0K4 717 aa28.73■■■□□ 2.19
NHLH1-201ENST00000302101 IPO9Q96P70 1041 aaKnown RBP28.73■■■□□ 2.19
NHLH1-201ENST00000302101 PEAK1Q9H792 1746 aa28.73■■■□□ 2.19
NHLH1-201ENST00000302101 TMPOP42166 694 aaKnown RBP28.72■■■□□ 2.19
NHLH1-201ENST00000302101 PRKAR2BP31323 418 aa28.72■■■□□ 2.19
NHLH1-201ENST00000302101 NCBP3Q53F19 620 aaKnown RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms