RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 PLEKHO1Q53GL0 409 aaPredicted RBP25.09■■□□□ 1.61
LTBP3-201ENST00000301873 FAM13BQ9NYF5 915 aa25.09■■□□□ 1.61
LTBP3-201ENST00000301873 PRPF40AO75400 957 aaKnown RBP25.09■■□□□ 1.61
LTBP3-201ENST00000301873 NASPP49321 788 aaPredicted RBP25.09■■□□□ 1.61
LTBP3-201ENST00000301873 SASS6Q6UVJ0 657 aa25.08■■□□□ 1.61
LTBP3-201ENST00000301873 GPRASP1Q5JY77 1395 aa25.08■■□□□ 1.61
LTBP3-201ENST00000301873 FAM177BA6PVY3 158 aa25.08■■□□□ 1.6
LTBP3-201ENST00000301873 TSR1Q2NL82 804 aaKnown RBP25.07■■□□□ 1.6
LTBP3-201ENST00000301873 CCDC73Q6ZRK6 1079 aa25.07■■□□□ 1.6
LTBP3-201ENST00000301873 PROSER2Q86WR7 435 aaPredicted RBP25.07■■□□□ 1.6
LTBP3-201ENST00000301873 RABEP1Q15276 862 aa25.07■■□□□ 1.6
LTBP3-201ENST00000301873 DNAJC2Q99543 621 aaKnown RBP25.06■■□□□ 1.6
LTBP3-201ENST00000301873 PLEKHH2Q8IVE3 1493 aa25.05■■□□□ 1.6
LTBP3-201ENST00000301873 DHX16O60231 1041 aaKnown RBP25.05■■□□□ 1.6
LTBP3-201ENST00000301873 CT47B1P0C2W7 299 aaPredicted RBP25.05■■□□□ 1.6
LTBP3-201ENST00000301873 CCDC61Q9Y6R9 512 aa25.05■■□□□ 1.6
LTBP3-201ENST00000301873 FCHSD2O94868 740 aa25.05■■□□□ 1.6
LTBP3-201ENST00000301873 ZNF530Q6P9A1 599 aaPredicted RBP25.05■■□□□ 1.6
LTBP3-201ENST00000301873 CHD1LQ86WJ1 897 aa25.05■■□□□ 1.6
LTBP3-201ENST00000301873 TMEM57Q8N5G2 664 aa25.05■■□□□ 1.6
LTBP3-201ENST00000301873 WAPLQ7Z5K2 1190 aa25.04■■□□□ 1.6
LTBP3-201ENST00000301873 SDF4Q9BRK5 362 aa25.04■■□□□ 1.6
LTBP3-201ENST00000301873 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.04■■□□□ 1.6
LTBP3-201ENST00000301873 RTEL1-TNFRSF6BF6WH68 1400 aa25.04■■□□□ 1.6
LTBP3-201ENST00000301873 KIAA0586Q9BVV6 1533 aa25.04■■□□□ 1.6
LTBP3-201ENST00000301873 ARHGEF11O15085 1522 aa25.03■■□□□ 1.6
LTBP3-201ENST00000301873 KDM4AO75164 1064 aa25.03■■□□□ 1.6
LTBP3-201ENST00000301873 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
LTBP3-201ENST00000301873 FIBPO43427 364 aa25.03■■□□□ 1.6
LTBP3-201ENST00000301873 SRCIN1Q9C0H9 1055 aa25.03■■□□□ 1.6
LTBP3-201ENST00000301873 NOL10Q9BSC4 688 aaKnown RBP25.02■■□□□ 1.6
LTBP3-201ENST00000301873 SIL1Q9H173 461 aa25.02■■□□□ 1.6
LTBP3-201ENST00000301873 TPM1P09493 284 aa25.02■■□□□ 1.6
LTBP3-201ENST00000301873 THEMISQ8N1K5 641 aaPredicted RBP25.02■■□□□ 1.6
LTBP3-201ENST00000301873 ABCC5O15440 1437 aa25.02■■□□□ 1.6
LTBP3-201ENST00000301873 HOMER1Q86YM7 354 aa25.02■■□□□ 1.6
LTBP3-201ENST00000301873 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
LTBP3-201ENST00000301873 DCTN1Q14203 1278 aa25.01■■□□□ 1.59
LTBP3-201ENST00000301873 IL1RAPL2Q9NP60 686 aa25.01■■□□□ 1.59
LTBP3-201ENST00000301873 MIS18AQ9NYP9 233 aa25.01■■□□□ 1.59
LTBP3-201ENST00000301873 GOLGA6L1Q8N7Z2 621 aa25.01■■□□□ 1.59
LTBP3-201ENST00000301873 ERICH2A1L162 156 aa25.01■■□□□ 1.59
LTBP3-201ENST00000301873 PSMA5P28066 241 aa25■■□□□ 1.59
LTBP3-201ENST00000301873 CCT4P50991 539 aaKnown RBP25■■□□□ 1.59
LTBP3-201ENST00000301873 LRRCC1Q9C099 1032 aa25■■□□□ 1.59
LTBP3-201ENST00000301873 PLB1Q6P1J6 1458 aa25■■□□□ 1.59
LTBP3-201ENST00000301873 SSH1Q8WYL5 1049 aa25■■□□□ 1.59
LTBP3-201ENST00000301873 FYB1O15117 783 aa25■■□□□ 1.59
LTBP3-201ENST00000301873 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
LTBP3-201ENST00000301873 MAP4K4O95819 1239 aaPredicted RBP24.99■■□□□ 1.59
LTBP3-201ENST00000301873 ATP2B1P20020 1258 aa24.99■■□□□ 1.59
LTBP3-201ENST00000301873 RPGRIP1LQ68CZ1 1315 aa24.99■■□□□ 1.59
LTBP3-201ENST00000301873 SAFBQ15424 915 aaKnown RBP eCLIP24.99■■□□□ 1.59
LTBP3-201ENST00000301873 AMOTL1Q8IY63 956 aa24.99■■□□□ 1.59
LTBP3-201ENST00000301873 NINLQ9Y2I6 1382 aa24.99■■□□□ 1.59
LTBP3-201ENST00000301873 BCL11BQ9C0K0 894 aaPredicted RBP24.99■■□□□ 1.59
LTBP3-201ENST00000301873 NFE2L2Q16236 605 aa24.98■■□□□ 1.59
LTBP3-201ENST00000301873 NUDT16Q96DE0 195 aaKnown RBP24.98■■□□□ 1.59
LTBP3-201ENST00000301873 STRN4Q9NRL3 753 aa24.98■■□□□ 1.59
LTBP3-201ENST00000301873 ATAD2Q6PL18 1390 aa24.98■■□□□ 1.59
LTBP3-201ENST00000301873 HECW1Q76N89 1606 aa24.98■■□□□ 1.59
LTBP3-201ENST00000301873 ANO8Q9HCE9 1232 aaPredicted RBP24.98■■□□□ 1.59
LTBP3-201ENST00000301873 MCM2P49736 904 aa24.98■■□□□ 1.59
LTBP3-201ENST00000301873 IL27Q8NEV9 243 aa24.98■■□□□ 1.59
LTBP3-201ENST00000301873 VSIG10Q8N0Z9 540 aa24.97■■□□□ 1.59
LTBP3-201ENST00000301873 RBM42Q9BTD8 480 aaKnown RBP24.97■■□□□ 1.59
LTBP3-201ENST00000301873 IFT57Q9NWB7 429 aa24.97■■□□□ 1.59
LTBP3-201ENST00000301873 SRGAP3O43295 1099 aa24.97■■□□□ 1.59
LTBP3-201ENST00000301873 RARSP54136 660 aaKnown RBP24.97■■□□□ 1.59
LTBP3-201ENST00000301873 ADGRF5Q8IZF2 1346 aa24.97■■□□□ 1.59
LTBP3-201ENST00000301873 MBD3O95983 291 aa24.96■■□□□ 1.59
LTBP3-201ENST00000301873 EXOC6BQ9Y2D4 811 aa24.96■■□□□ 1.59
LTBP3-201ENST00000301873 SUPT6HQ7KZ85 1726 aaKnown RBP24.96■■□□□ 1.59
LTBP3-201ENST00000301873 XPCQ01831 940 aaPredicted RBP24.96■■□□□ 1.59
LTBP3-201ENST00000301873 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
LTBP3-201ENST00000301873 PCMTD1Q96MG8 357 aaPredicted RBP24.96■■□□□ 1.59
LTBP3-201ENST00000301873 MTMR7Q9Y216 660 aa24.95■■□□□ 1.58
LTBP3-201ENST00000301873 MYL6BP14649 208 aa24.95■■□□□ 1.58
LTBP3-201ENST00000301873 MCM10Q7L590 875 aa24.95■■□□□ 1.58
LTBP3-201ENST00000301873 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
LTBP3-201ENST00000301873 TATP17735 454 aaPredicted RBP24.94■■□□□ 1.58
LTBP3-201ENST00000301873 CEP89Q96ST8 783 aa24.94■■□□□ 1.58
LTBP3-201ENST00000301873 MPNDQ8N594 471 aa24.94■■□□□ 1.58
LTBP3-201ENST00000301873 A0A0U1RQG5 324 aaPredicted RBP24.94■■□□□ 1.58
LTBP3-201ENST00000301873 TNNT3P45378 269 aaPredicted RBP24.94■■□□□ 1.58
LTBP3-201ENST00000301873 K7ELQ4 463 aaPredicted RBP24.94■■□□□ 1.58
LTBP3-201ENST00000301873 IPO7O95373 1038 aaKnown RBP24.94■■□□□ 1.58
LTBP3-201ENST00000301873 CEBPZQ03701 1054 aaKnown RBP24.94■■□□□ 1.58
LTBP3-201ENST00000301873 FMNL2Q96PY5 1086 aa24.94■■□□□ 1.58
LTBP3-201ENST00000301873 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
LTBP3-201ENST00000301873 DDX54Q8TDD1 881 aaKnown RBP24.93■■□□□ 1.58
LTBP3-201ENST00000301873 PDCP20941 246 aa24.93■■□□□ 1.58
LTBP3-201ENST00000301873 PCF11O94913 1555 aaKnown RBP24.93■■□□□ 1.58
LTBP3-201ENST00000301873 R3HCC1Q9Y3T6 440 aaKnown RBP24.93■■□□□ 1.58
LTBP3-201ENST00000301873 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.92■■□□□ 1.58
LTBP3-201ENST00000301873 HOOK1Q9UJC3 728 aaKnown RBP24.92■■□□□ 1.58
LTBP3-201ENST00000301873 ANKRD20A12PQ8NF67 263 aa24.91■■□□□ 1.58
LTBP3-201ENST00000301873 MAGI1Q96QZ7 1491 aaPredicted RBP24.91■■□□□ 1.58
LTBP3-201ENST00000301873 STK3Q13188 491 aa24.9■■□□□ 1.58
LTBP3-201ENST00000301873 IDI1Q13907 227 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms