RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 FOSBP53539 338 aa18.39■□□□□ 0.53
DDB1-201ENST00000301764 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
DDB1-201ENST00000301764 SPINK5Q9NQ38 1064 aaPredicted RBP18.39■□□□□ 0.53
DDB1-201ENST00000301764 RLBP1P12271 317 aa18.39■□□□□ 0.53
DDB1-201ENST00000301764 TBC1D9Q6ZT07 1266 aa18.39■□□□□ 0.53
DDB1-201ENST00000301764 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
DDB1-201ENST00000301764 NESP48681 1621 aa18.38■□□□□ 0.53
DDB1-201ENST00000301764 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
DDB1-201ENST00000301764 TEX35Q5T0J7 233 aa18.38■□□□□ 0.53
DDB1-201ENST00000301764 NSD3Q9BZ95 1437 aa18.38■□□□□ 0.53
DDB1-201ENST00000301764 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
DDB1-201ENST00000301764 RBM42Q9BTD8 480 aaKnown RBP18.37■□□□□ 0.53
DDB1-201ENST00000301764 PER1O15534 1290 aaPredicted RBP18.37■□□□□ 0.53
DDB1-201ENST00000301764 HDGFP51858 240 aaKnown RBP18.37■□□□□ 0.53
DDB1-201ENST00000301764 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
DDB1-201ENST00000301764 BIVM-ERCC5R4GMW8 1640 aa18.37■□□□□ 0.53
DDB1-201ENST00000301764 IFIT2P09913 472 aaKnown RBP18.37■□□□□ 0.53
DDB1-201ENST00000301764 CREBRFQ8IUR6 639 aa18.37■□□□□ 0.53
DDB1-201ENST00000301764 USP25Q9UHP3 1055 aa18.37■□□□□ 0.53
DDB1-201ENST00000301764 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
DDB1-201ENST00000301764 BMP2KLQ5H9B9 411 aa18.35■□□□□ 0.53
DDB1-201ENST00000301764 CCDC112Q8NEF3 446 aa18.35■□□□□ 0.53
DDB1-201ENST00000301764 GDPD2Q9HCC8 539 aa18.35■□□□□ 0.53
DDB1-201ENST00000301764 CCDC192P0DO97 292 aa18.35■□□□□ 0.53
DDB1-201ENST00000301764 CAMSAP2Q08AD1 1489 aa18.35■□□□□ 0.53
DDB1-201ENST00000301764 ZSCAN23Q3MJ62 389 aa18.35■□□□□ 0.53
DDB1-201ENST00000301764 MNS1Q8NEH6 495 aa18.35■□□□□ 0.53
DDB1-201ENST00000301764 SURF6O75683 361 aaKnown RBP18.35■□□□□ 0.53
DDB1-201ENST00000301764 CCDC73Q6ZRK6 1079 aa18.34■□□□□ 0.53
DDB1-201ENST00000301764 NGDNQ8NEJ9 315 aaKnown RBP18.34■□□□□ 0.53
DDB1-201ENST00000301764 C9orf78Q9NZ63 289 aaPredicted RBP18.34■□□□□ 0.53
DDB1-201ENST00000301764 GPRASP1Q5JY77 1395 aa18.34■□□□□ 0.53
DDB1-201ENST00000301764 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.53
DDB1-201ENST00000301764 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.52
DDB1-201ENST00000301764 GORABQ5T7V8 394 aa18.33■□□□□ 0.52
DDB1-201ENST00000301764 RNF20Q5VTR2 975 aa18.33■□□□□ 0.52
DDB1-201ENST00000301764 RALGAPBQ86X10 1494 aa18.33■□□□□ 0.52
DDB1-201ENST00000301764 DYNC1I1O14576 645 aa18.33■□□□□ 0.52
DDB1-201ENST00000301764 SLC4A2P04920 1241 aa18.32■□□□□ 0.52
DDB1-201ENST00000301764 UBTFL1P0CB47 393 aaPredicted RBP18.32■□□□□ 0.52
DDB1-201ENST00000301764 GPS2Q13227 327 aa18.32■□□□□ 0.52
DDB1-201ENST00000301764 MAPK8IP2Q13387 824 aaPredicted RBP18.32■□□□□ 0.52
DDB1-201ENST00000301764 ARGLU1Q9NWB6 273 aaPredicted RBP18.32■□□□□ 0.52
DDB1-201ENST00000301764 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
DDB1-201ENST00000301764 SDF4Q9BRK5 362 aa18.31■□□□□ 0.52
DDB1-201ENST00000301764 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
DDB1-201ENST00000301764 OFD1O75665 1012 aa18.3■□□□□ 0.52
DDB1-201ENST00000301764 GNAI3P08754 354 aa18.3■□□□□ 0.52
DDB1-201ENST00000301764 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
DDB1-201ENST00000301764 TESK2Q96S53 571 aa18.3■□□□□ 0.52
DDB1-201ENST00000301764 GRIN2BQ13224 1484 aa18.3■□□□□ 0.52
DDB1-201ENST00000301764 MAP4K4O95819 1239 aaPredicted RBP18.3■□□□□ 0.52
DDB1-201ENST00000301764 GAS2L2Q8NHY3 880 aa18.3■□□□□ 0.52
DDB1-201ENST00000301764 TULP1O00294 542 aaPredicted RBP18.3■□□□□ 0.52
DDB1-201ENST00000301764 GNAI2P04899 355 aa18.29■□□□□ 0.52
DDB1-201ENST00000301764 HDAC1Q13547 482 aaPredicted RBP18.29■□□□□ 0.52
DDB1-201ENST00000301764 EXOC6BQ9Y2D4 811 aa18.29■□□□□ 0.52
DDB1-201ENST00000301764 MCM5P33992 734 aa18.29■□□□□ 0.52
DDB1-201ENST00000301764 CEBPZQ03701 1054 aaKnown RBP18.29■□□□□ 0.52
DDB1-201ENST00000301764 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
DDB1-201ENST00000301764 SPDYE4A6NLX3 237 aa18.29■□□□□ 0.52
DDB1-201ENST00000301764 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
DDB1-201ENST00000301764 RAB3GAP1Q15042 981 aa18.29■□□□□ 0.52
DDB1-201ENST00000301764 ZNF428Q96B54 188 aa18.29■□□□□ 0.52
DDB1-201ENST00000301764 ZNF830Q96NB3 372 aaPredicted RBP18.29■□□□□ 0.52
DDB1-201ENST00000301764 LRRCC1Q9C099 1032 aa18.28■□□□□ 0.52
DDB1-201ENST00000301764 TNMDQ9H2S6 317 aa18.28■□□□□ 0.52
DDB1-201ENST00000301764 PPP4R3BQ5MIZ7 849 aa18.28■□□□□ 0.52
DDB1-201ENST00000301764 SNX21Q969T3 373 aa18.28■□□□□ 0.52
DDB1-201ENST00000301764 ZKSCAN5Q9Y2L8 839 aa18.28■□□□□ 0.52
DDB1-201ENST00000301764 ZNF330Q9Y3S2 320 aaPredicted RBP18.28■□□□□ 0.52
DDB1-201ENST00000301764 RPAP2Q8IXW5 612 aaPredicted RBP18.28■□□□□ 0.52
DDB1-201ENST00000301764 PDCP20941 246 aa18.27■□□□□ 0.52
DDB1-201ENST00000301764 NUCB1Q02818 461 aa18.27■□□□□ 0.51
DDB1-201ENST00000301764 SMC5Q8IY18 1101 aa18.27■□□□□ 0.51
DDB1-201ENST00000301764 CCDC34Q96HJ3 373 aa18.27■□□□□ 0.51
DDB1-201ENST00000301764 ERICH4A6NGS2 130 aa18.26■□□□□ 0.51
DDB1-201ENST00000301764 IL1RAPL2Q9NP60 686 aa18.26■□□□□ 0.51
DDB1-201ENST00000301764 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
DDB1-201ENST00000301764 KRT85P78386 507 aa18.26■□□□□ 0.51
DDB1-201ENST00000301764 FILIP1Q7Z7B0 1213 aa18.26■□□□□ 0.51
DDB1-201ENST00000301764 TEFQ10587 303 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 LARP1BQ659C4 914 aaKnown RBP18.25■□□□□ 0.51
DDB1-201ENST00000301764 FERMT3Q86UX7 667 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 CABP1Q9NZU7 370 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 FCHSD2O94868 740 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 ALDH1L2Q3SY69 923 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 HSP90AB4PQ58FF6 505 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 LRSAM1Q6UWE0 723 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
DDB1-201ENST00000301764 PRAM1Q96QH2 718 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 ADCY5O95622 1261 aa18.25■□□□□ 0.51
DDB1-201ENST00000301764 G3BP1Q13283 466 aaKnown RBP eCLIP18.24■□□□□ 0.514e-8■■□□□ 14.2
DDB1-201ENST00000301764 KINO60870 393 aaKnown RBP18.24■□□□□ 0.51
DDB1-201ENST00000301764 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
DDB1-201ENST00000301764 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
DDB1-201ENST00000301764 CAMK4Q16566 473 aa18.24■□□□□ 0.51
DDB1-201ENST00000301764 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
DDB1-201ENST00000301764 NUP62CLQ9H1M0 184 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms