RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 ALKQ9UM73 1620 aa20.09■□□□□ 0.81
CACNB3-201ENST00000301050 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.8
CACNB3-201ENST00000301050 PTPRMP28827 1452 aa20.08■□□□□ 0.8
CACNB3-201ENST00000301050 ZMYM3Q14202 1370 aa20.07■□□□□ 0.8
CACNB3-201ENST00000301050 TRMT2AQ8IZ69 625 aaKnown RBP20.07■□□□□ 0.8
CACNB3-201ENST00000301050 PRAM1Q96QH2 718 aa20.06■□□□□ 0.8
CACNB3-201ENST00000301050 CHMP5Q9NZZ3 219 aa20.06■□□□□ 0.8
CACNB3-201ENST00000301050 RIMS2Q9UQ26 1411 aa20.06■□□□□ 0.8
CACNB3-201ENST00000301050 CALD1Q05682 793 aaKnown RBP20.06■□□□□ 0.8
CACNB3-201ENST00000301050 TRIM44Q96DX7 344 aaPredicted RBP20.06■□□□□ 0.8
CACNB3-201ENST00000301050 MINK1Q8N4C8 1332 aaPredicted RBP20.06■□□□□ 0.8
CACNB3-201ENST00000301050 CGNL1Q0VF96 1302 aa20.04■□□□□ 0.8
CACNB3-201ENST00000301050 TNNT2P45379 298 aaPredicted RBP20.04■□□□□ 0.8
CACNB3-201ENST00000301050 SPINK5Q9NQ38 1064 aaPredicted RBP20.04■□□□□ 0.8
CACNB3-201ENST00000301050 ISY1Q9ULR0 285 aaKnown RBP20.04■□□□□ 0.8
CACNB3-201ENST00000301050 CLUAP1Q96AJ1 413 aa20.04■□□□□ 0.8
CACNB3-201ENST00000301050 SRPK2P78362 688 aaKnown RBP20.03■□□□□ 0.8
CACNB3-201ENST00000301050 PRDM4Q9UKN5 801 aa20.03■□□□□ 0.8
CACNB3-201ENST00000301050 MORC1Q86VD1 984 aa20.03■□□□□ 0.8
CACNB3-201ENST00000301050 NKTRP30414 1462 aaKnown RBP20.02■□□□□ 0.8
CACNB3-201ENST00000301050 KIAA1211Q6ZU35 1233 aa20.02■□□□□ 0.8
CACNB3-201ENST00000301050 CCDC146Q8IYE0 955 aa20.02■□□□□ 0.8
CACNB3-201ENST00000301050 PUS7Q96PZ0 661 aaKnown RBP20■□□□□ 0.79
CACNB3-201ENST00000301050 ANKRD36BQ8N2N9 1353 aa20■□□□□ 0.79
CACNB3-201ENST00000301050 DDX11L8A8MPP1 907 aa19.99■□□□□ 0.79
CACNB3-201ENST00000301050 PDE3AQ14432 1141 aa19.99■□□□□ 0.79
CACNB3-201ENST00000301050 USP32Q8NFA0 1604 aa19.99■□□□□ 0.79
CACNB3-201ENST00000301050 COG6Q9Y2V7 657 aa19.99■□□□□ 0.79
CACNB3-201ENST00000301050 GAS2L3Q86XJ1 694 aa19.99■□□□□ 0.79
CACNB3-201ENST00000301050 SETD1AO15047 1707 aaKnown RBP19.98■□□□□ 0.79
CACNB3-201ENST00000301050 PANK1Q8TE04 598 aa19.98■□□□□ 0.79
CACNB3-201ENST00000301050 TNRQ92752 1358 aa19.97■□□□□ 0.79
CACNB3-201ENST00000301050 WAPLQ7Z5K2 1190 aa19.96■□□□□ 0.79
CACNB3-201ENST00000301050 A0A1W2PP64 1363 aa19.96■□□□□ 0.79
CACNB3-201ENST00000301050 NRXN3Q9Y4C0 1643 aa19.96■□□□□ 0.79
CACNB3-201ENST00000301050 ZNF692Q9BU19 519 aaPredicted RBP19.95■□□□□ 0.78
CACNB3-201ENST00000301050 CDK19Q9BWU1 502 aa19.94■□□□□ 0.78
CACNB3-201ENST00000301050 PDZRN3Q9UPQ7 1066 aa19.94■□□□□ 0.78
CACNB3-201ENST00000301050 POLR3AO14802 1390 aaPredicted RBP19.94■□□□□ 0.78
CACNB3-201ENST00000301050 RIPK4P57078 832 aa19.93■□□□□ 0.78
CACNB3-201ENST00000301050 RBM10P98175 930 aaKnown RBP19.93■□□□□ 0.78
CACNB3-201ENST00000301050 E9PSI1 815 aa19.93■□□□□ 0.78
CACNB3-201ENST00000301050 APAF1O14727 1248 aa19.92■□□□□ 0.78
CACNB3-201ENST00000301050 CANXP27824 592 aaKnown RBP19.92■□□□□ 0.78
CACNB3-201ENST00000301050 ATAD2Q6PL18 1390 aa19.92■□□□□ 0.78
CACNB3-201ENST00000301050 PMFBP1Q8TBY8 1022 aa19.92■□□□□ 0.78
CACNB3-201ENST00000301050 SHPRHQ149N8 1683 aa19.92■□□□□ 0.78
CACNB3-201ENST00000301050 METP08581 1390 aa19.92■□□□□ 0.78
CACNB3-201ENST00000301050 NINLQ9Y2I6 1382 aa19.92■□□□□ 0.78
CACNB3-201ENST00000301050 OFD1O75665 1012 aa19.91■□□□□ 0.78
CACNB3-201ENST00000301050 CEBPAP49715 358 aaPredicted RBP19.91■□□□□ 0.78
CACNB3-201ENST00000301050 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.91■□□□□ 0.78
CACNB3-201ENST00000301050 C22orf23Q9BZE7 217 aa19.91■□□□□ 0.78
CACNB3-201ENST00000301050 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
CACNB3-201ENST00000301050 PLPPR3Q6T4P5 718 aa19.91■□□□□ 0.78
CACNB3-201ENST00000301050 PCDHB15Q9Y5E8 787 aa19.91■□□□□ 0.78
CACNB3-201ENST00000301050 DLC1Q96QB1 1528 aa19.91■□□□□ 0.78
CACNB3-201ENST00000301050 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
CACNB3-201ENST00000301050 CD163L1Q9NR16 1453 aa19.9■□□□□ 0.78
CACNB3-201ENST00000301050 MTHFSP49914 203 aa19.9■□□□□ 0.78
CACNB3-201ENST00000301050 ZSCAN30Q86W11 494 aa19.89■□□□□ 0.77
CACNB3-201ENST00000301050 GGNBP2Q9H3C7 697 aa19.89■□□□□ 0.77
CACNB3-201ENST00000301050 NSD2O96028 1365 aa19.88■□□□□ 0.77
CACNB3-201ENST00000301050 ABCC11Q96J66 1382 aa19.88■□□□□ 0.77
CACNB3-201ENST00000301050 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
CACNB3-201ENST00000301050 CABP1Q9NZU7 370 aa19.88■□□□□ 0.77
CACNB3-201ENST00000301050 DDIT3P35638 169 aa19.87■□□□□ 0.77
CACNB3-201ENST00000301050 MFAP1P55081 439 aaKnown RBP19.87■□□□□ 0.77
CACNB3-201ENST00000301050 CCDC173Q0VFZ6 552 aa19.87■□□□□ 0.77
CACNB3-201ENST00000301050 PPP1R9BQ96SB3 815 aa19.87■□□□□ 0.77
CACNB3-201ENST00000301050 TERF2IPQ9NYB0 399 aa19.87■□□□□ 0.77
CACNB3-201ENST00000301050 TXNDC2Q86VQ3 553 aa19.87■□□□□ 0.77
CACNB3-201ENST00000301050 HSCBQ8IWL3 235 aa19.87■□□□□ 0.77
CACNB3-201ENST00000301050 TMEM2Q9UHN6 1383 aa19.86■□□□□ 0.77
CACNB3-201ENST00000301050 A0A0U1RQG5 324 aaPredicted RBP19.86■□□□□ 0.77
CACNB3-201ENST00000301050 TERF1P54274 439 aa19.86■□□□□ 0.77
CACNB3-201ENST00000301050 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.86■□□□□ 0.77
CACNB3-201ENST00000301050 TNPO1Q92973 898 aaKnown RBP19.86■□□□□ 0.77
CACNB3-201ENST00000301050 MAP7D2Q96T17 732 aa19.85■□□□□ 0.77
CACNB3-201ENST00000301050 NCOA3Q9Y6Q9 1424 aa19.85■□□□□ 0.77
CACNB3-201ENST00000301050 FAM13BQ9NYF5 915 aa19.85■□□□□ 0.77
CACNB3-201ENST00000301050 HDGFP51858 240 aaKnown RBP19.84■□□□□ 0.77
CACNB3-201ENST00000301050 HDGFL2Q7Z4V5 671 aaPredicted RBP19.84■□□□□ 0.77
CACNB3-201ENST00000301050 CFAP53Q96M91 514 aa19.83■□□□□ 0.77
CACNB3-201ENST00000301050 FYB1O15117 783 aa19.82■□□□□ 0.76
CACNB3-201ENST00000301050 AAMPQ13685 434 aa19.82■□□□□ 0.76
CACNB3-201ENST00000301050 SKOR2Q2VWA4 1001 aaPredicted RBP19.82■□□□□ 0.76
CACNB3-201ENST00000301050 RLBP1P12271 317 aa19.81■□□□□ 0.76
CACNB3-201ENST00000301050 MSNP26038 577 aaKnown RBP19.81■□□□□ 0.76
CACNB3-201ENST00000301050 NASPP49321 788 aaPredicted RBP19.81■□□□□ 0.76
CACNB3-201ENST00000301050 C3P01024 1663 aa19.81■□□□□ 0.76
CACNB3-201ENST00000301050 GBP4Q96PP9 640 aa19.81■□□□□ 0.76
CACNB3-201ENST00000301050 RWDD1Q9H446 243 aaPredicted RBP19.81■□□□□ 0.76
CACNB3-201ENST00000301050 TNNQ9UQP3 1299 aa19.81■□□□□ 0.76
CACNB3-201ENST00000301050 ANKRD26Q9UPS8 1709 aa19.81■□□□□ 0.76
CACNB3-201ENST00000301050 LTKP29376 864 aa19.8■□□□□ 0.76
CACNB3-201ENST00000301050 RRP7AQ9Y3A4 280 aaKnown RBP19.8■□□□□ 0.76
CACNB3-201ENST00000301050 R3HCC1Q9Y3T6 440 aaKnown RBP19.8■□□□□ 0.76
CACNB3-201ENST00000301050 KNDC1Q76NI1 1749 aa19.8■□□□□ 0.76
CACNB3-201ENST00000301050 NEUROD2Q15784 382 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms