RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 TRIM6-TRIM34B2RNG4 842 aa21.56■■□□□ 1.04
CHRNA5-201ENST00000299565 MCTP1Q6DN14 999 aa21.55■■□□□ 1.04
CHRNA5-201ENST00000299565 TRIM35Q9UPQ4 493 aa21.55■■□□□ 1.04
CHRNA5-201ENST00000299565 RSPH6AQ9H0K4 717 aa21.55■■□□□ 1.04
CHRNA5-201ENST00000299565 CDC42BPBQ9Y5S2 1711 aa21.55■■□□□ 1.04
CHRNA5-201ENST00000299565 PTPRTO14522 1441 aa21.55■■□□□ 1.04
CHRNA5-201ENST00000299565 INSRP06213 1382 aa21.55■■□□□ 1.04
CHRNA5-201ENST00000299565 SMARCA5O60264 1052 aaPredicted RBP21.54■■□□□ 1.04
CHRNA5-201ENST00000299565 GNAI1P63096 354 aa21.54■■□□□ 1.04
CHRNA5-201ENST00000299565 NCKAP5LQ9HCH0 1330 aa21.54■■□□□ 1.04
CHRNA5-201ENST00000299565 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
CHRNA5-201ENST00000299565 KRT24Q2M2I5 525 aa21.53■■□□□ 1.04
CHRNA5-201ENST00000299565 NPC1L1Q9UHC9 1359 aa21.53■■□□□ 1.04
CHRNA5-201ENST00000299565 RILPL2Q969X0 211 aa21.53■■□□□ 1.04
CHRNA5-201ENST00000299565 SULT6B1Q6IMI4 303 aa21.52■■□□□ 1.04
CHRNA5-201ENST00000299565 TNPO1Q92973 898 aaKnown RBP21.52■■□□□ 1.04
CHRNA5-201ENST00000299565 ABCC2Q92887 1545 aa21.52■■□□□ 1.04
CHRNA5-201ENST00000299565 PREX2Q70Z35 1606 aa21.52■■□□□ 1.04
CHRNA5-201ENST00000299565 PTMAP06454 111 aaKnown RBP21.52■■□□□ 1.03
CHRNA5-201ENST00000299565 ATAD2Q6PL18 1390 aa21.51■■□□□ 1.03
CHRNA5-201ENST00000299565 ZNF428Q96B54 188 aa21.51■■□□□ 1.03
CHRNA5-201ENST00000299565 MCM10Q7L590 875 aa21.5■■□□□ 1.03
CHRNA5-201ENST00000299565 GRPEL1Q9HAV7 217 aa21.5■■□□□ 1.03
CHRNA5-201ENST00000299565 RRAGDQ9NQL2 400 aaPredicted RBP21.5■■□□□ 1.03
CHRNA5-201ENST00000299565 A0A1W2PP64 1363 aa21.5■■□□□ 1.03
CHRNA5-201ENST00000299565 NUTM2GQ5VZR2 741 aa21.5■■□□□ 1.03
CHRNA5-201ENST00000299565 C16orf71Q8IYS4 520 aaPredicted RBP21.5■■□□□ 1.03
CHRNA5-201ENST00000299565 FCHSD2O94868 740 aa21.49■■□□□ 1.03
CHRNA5-201ENST00000299565 SSFA2P28290 1259 aa21.49■■□□□ 1.03
CHRNA5-201ENST00000299565 MRE11P49959 708 aa21.49■■□□□ 1.03
CHRNA5-201ENST00000299565 TBC1D9Q6ZT07 1266 aa21.49■■□□□ 1.03
CHRNA5-201ENST00000299565 ZBTB40Q9NUA8 1239 aa21.49■■□□□ 1.03
CHRNA5-201ENST00000299565 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
CHRNA5-201ENST00000299565 MSNP26038 577 aaKnown RBP21.48■■□□□ 1.03
CHRNA5-201ENST00000299565 CCDC27Q2M243 656 aa21.48■■□□□ 1.03
CHRNA5-201ENST00000299565 CAVIN1Q6NZI2 390 aaKnown RBP21.48■■□□□ 1.03
CHRNA5-201ENST00000299565 API5Q9BZZ5 524 aaKnown RBP21.48■■□□□ 1.03
CHRNA5-201ENST00000299565 CDC45O75419 566 aa21.47■■□□□ 1.03
CHRNA5-201ENST00000299565 NFE2L2Q16236 605 aa21.47■■□□□ 1.03
CHRNA5-201ENST00000299565 ANKRD36BQ8N2N9 1353 aa21.47■■□□□ 1.03
CHRNA5-201ENST00000299565 LMOD2Q6P5Q4 547 aa21.47■■□□□ 1.03
CHRNA5-201ENST00000299565 MPNDQ8N594 471 aa21.47■■□□□ 1.03
CHRNA5-201ENST00000299565 C8orf58Q8NAV2 365 aa21.47■■□□□ 1.03
CHRNA5-201ENST00000299565 MBIPQ9NS73 344 aa21.47■■□□□ 1.03
CHRNA5-201ENST00000299565 CT47B1P0C2W7 299 aaPredicted RBP21.46■■□□□ 1.03
CHRNA5-201ENST00000299565 HDAC1Q13547 482 aaPredicted RBP21.46■■□□□ 1.03
CHRNA5-201ENST00000299565 TSHZ3Q63HK5 1081 aa21.46■■□□□ 1.03
CHRNA5-201ENST00000299565 CD109Q6YHK3 1445 aa21.46■■□□□ 1.03
CHRNA5-201ENST00000299565 RPGRIP1LQ68CZ1 1315 aa21.45■■□□□ 1.02
CHRNA5-201ENST00000299565 K7ELQ4 463 aaPredicted RBP21.45■■□□□ 1.02
CHRNA5-201ENST00000299565 NUCB1Q02818 461 aa21.45■■□□□ 1.02
CHRNA5-201ENST00000299565 LMOD3Q0VAK6 560 aa21.45■■□□□ 1.02
CHRNA5-201ENST00000299565 SMC5Q8IY18 1101 aa21.44■■□□□ 1.02
CHRNA5-201ENST00000299565 RNF214Q8ND24 703 aa21.44■■□□□ 1.02
CHRNA5-201ENST00000299565 SLC4A2P04920 1241 aa21.44■■□□□ 1.02
CHRNA5-201ENST00000299565 DNTTIP2Q5QJE6 756 aaKnown RBP21.44■■□□□ 1.02
CHRNA5-201ENST00000299565 POLKQ9UBT6 870 aa21.44■■□□□ 1.02
CHRNA5-201ENST00000299565 F6X3S4 739 aa21.44■■□□□ 1.02
CHRNA5-201ENST00000299565 GCC1Q96CN9 775 aa21.44■■□□□ 1.02
CHRNA5-201ENST00000299565 SLC52A1Q9NWF4 448 aa21.43■■□□□ 1.02
CHRNA5-201ENST00000299565 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.43■■□□□ 1.02
CHRNA5-201ENST00000299565 ANTXR1Q9H6X2 564 aa21.43■■□□□ 1.02
CHRNA5-201ENST00000299565 ASXL2Q76L83 1435 aa21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 ST18O60284 1047 aa21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 OS9Q13438 667 aaPredicted RBP21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 GLIPR1L2Q4G1C9 344 aa21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 PRPF40AO75400 957 aaKnown RBP21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 AMPHP49418 695 aa21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 AEBP1Q8IUX7 1158 aa21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 STK31Q9BXU1 1019 aa21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 ANO2Q9NQ90 1003 aa21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 MYO5CQ9NQX4 1742 aa21.42■■□□□ 1.02
CHRNA5-201ENST00000299565 FAM69CQ0P6D2 419 aa21.41■■□□□ 1.02
CHRNA5-201ENST00000299565 NGDNQ8NEJ9 315 aaKnown RBP21.41■■□□□ 1.02
CHRNA5-201ENST00000299565 FKBP5Q13451 457 aaPredicted RBP21.41■■□□□ 1.02
CHRNA5-201ENST00000299565 NASPP49321 788 aaPredicted RBP21.4■■□□□ 1.02
CHRNA5-201ENST00000299565 OTUD7AQ8TE49 926 aaPredicted RBP21.4■■□□□ 1.02
CHRNA5-201ENST00000299565 EXOC6BQ9Y2D4 811 aa21.4■■□□□ 1.02
CHRNA5-201ENST00000299565 VAMP4O75379 141 aa21.4■■□□□ 1.02
CHRNA5-201ENST00000299565 TSPYL4Q9UJ04 414 aa21.4■■□□□ 1.02
CHRNA5-201ENST00000299565 ATP7AQ04656 1500 aa21.39■■□□□ 1.02
CHRNA5-201ENST00000299565 IQGAP3Q86VI3 1631 aa21.39■■□□□ 1.02
CHRNA5-201ENST00000299565 NEK4P51957 841 aa21.39■■□□□ 1.02
CHRNA5-201ENST00000299565 GAS2L2Q8NHY3 880 aa21.39■■□□□ 1.02
CHRNA5-201ENST00000299565 SYNMO15061 1565 aa21.39■■□□□ 1.02
CHRNA5-201ENST00000299565 RTEL1-TNFRSF6BF6WH68 1400 aa21.39■■□□□ 1.01
CHRNA5-201ENST00000299565 EIF2S2P20042 333 aaKnown RBP21.38■■□□□ 1.01
CHRNA5-201ENST00000299565 CLTCL1P53675 1640 aa21.38■■□□□ 1.01
CHRNA5-201ENST00000299565 CD2BP2O95400 341 aaKnown RBP21.38■■□□□ 1.01
CHRNA5-201ENST00000299565 ESPNB1AK53 854 aa21.38■■□□□ 1.01
CHRNA5-201ENST00000299565 HSP90AA2PQ14568 343 aaPredicted RBP21.38■■□□□ 1.01
CHRNA5-201ENST00000299565 INTS3Q68E01 1043 aaKnown RBP21.38■■□□□ 1.01
CHRNA5-201ENST00000299565 E9PCH4 1651 aa21.38■■□□□ 1.01
CHRNA5-201ENST00000299565 KDM5AP29375 1690 aaKnown RBP21.38■■□□□ 1.01
CHRNA5-201ENST00000299565 HMMRO75330 724 aa21.37■■□□□ 1.01
CHRNA5-201ENST00000299565 BMP2KLQ5H9B9 411 aa21.37■■□□□ 1.01
CHRNA5-201ENST00000299565 NPATQ14207 1427 aa21.37■■□□□ 1.01
CHRNA5-201ENST00000299565 SKOR2Q2VWA4 1001 aaPredicted RBP21.36■■□□□ 1.01
CHRNA5-201ENST00000299565 ALDH1L2Q3SY69 923 aa21.36■■□□□ 1.01
CHRNA5-201ENST00000299565 ZBTB7BO15156 539 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms