RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 MYOM2P54296 1465 aa17.3■□□□□ 0.36
TTC39B-201ENST00000297615 SLKQ9H2G2 1235 aaPredicted RBP17.3■□□□□ 0.36
TTC39B-201ENST00000297615 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
TTC39B-201ENST00000297615 POLR3AO14802 1390 aaPredicted RBP17.29■□□□□ 0.36
TTC39B-201ENST00000297615 ADGRB3O60242 1522 aa17.29■□□□□ 0.36
TTC39B-201ENST00000297615 XPCQ01831 940 aaPredicted RBP17.29■□□□□ 0.36
TTC39B-201ENST00000297615 WASLO00401 505 aaPredicted RBP17.28■□□□□ 0.36
TTC39B-201ENST00000297615 ZMYM3Q14202 1370 aa17.28■□□□□ 0.36
TTC39B-201ENST00000297615 MCM10Q7L590 875 aa17.28■□□□□ 0.36
TTC39B-201ENST00000297615 PDZRN3Q9UPQ7 1066 aa17.28■□□□□ 0.36
TTC39B-201ENST00000297615 TULP4Q9NRJ4 1543 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 MYOM1P52179 1685 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 TRIM27P14373 513 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 COG3Q96JB2 828 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 DIP2CQ9Y2E4 1556 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 TMEM57Q8N5G2 664 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 IL27Q8NEV9 243 aa17.27■□□□□ 0.36
TTC39B-201ENST00000297615 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.35
TTC39B-201ENST00000297615 ADGRB1O14514 1584 aa17.26■□□□□ 0.35
TTC39B-201ENST00000297615 ATAD2Q6PL18 1390 aa17.26■□□□□ 0.35
TTC39B-201ENST00000297615 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
TTC39B-201ENST00000297615 FOXO3O43524 673 aa17.25■□□□□ 0.35
TTC39B-201ENST00000297615 NFKBIBQ15653 356 aa17.25■□□□□ 0.35
TTC39B-201ENST00000297615 ZKSCAN2Q63HK3 967 aa17.25■□□□□ 0.35
TTC39B-201ENST00000297615 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
TTC39B-201ENST00000297615 LNPKQ9C0E8 428 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 INSRP06213 1382 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 NEO1Q92859 1461 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 GLI2P10070 1586 aa17.24■□□□□ 0.35
TTC39B-201ENST00000297615 MYO5BQ9ULV0 1848 aa17.23■□□□□ 0.35
TTC39B-201ENST00000297615 NPC1L1Q9UHC9 1359 aa17.23■□□□□ 0.35
TTC39B-201ENST00000297615 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
TTC39B-201ENST00000297615 CCDC61Q9Y6R9 512 aa17.23■□□□□ 0.35
TTC39B-201ENST00000297615 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
TTC39B-201ENST00000297615 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
TTC39B-201ENST00000297615 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
TTC39B-201ENST00000297615 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
TTC39B-201ENST00000297615 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
TTC39B-201ENST00000297615 CAMSAP1Q5T5Y3 1602 aa17.21■□□□□ 0.35
TTC39B-201ENST00000297615 NEXMIFQ5QGS0 1516 aa17.21■□□□□ 0.35
TTC39B-201ENST00000297615 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
TTC39B-201ENST00000297615 C8orf58Q8NAV2 365 aa17.2■□□□□ 0.34
TTC39B-201ENST00000297615 ACEP12821 1306 aa17.2■□□□□ 0.34
TTC39B-201ENST00000297615 PDE3AQ14432 1141 aa17.2■□□□□ 0.34
TTC39B-201ENST00000297615 PIK3C2BO00750 1634 aa17.19■□□□□ 0.34
TTC39B-201ENST00000297615 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
TTC39B-201ENST00000297615 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
TTC39B-201ENST00000297615 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
TTC39B-201ENST00000297615 MVPQ14764 893 aaKnown RBP17.18■□□□□ 0.34
TTC39B-201ENST00000297615 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
TTC39B-201ENST00000297615 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 ABCC11Q96J66 1382 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 ATF7IPQ6VMQ6 1270 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
TTC39B-201ENST00000297615 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
TTC39B-201ENST00000297615 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
TTC39B-201ENST00000297615 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
TTC39B-201ENST00000297615 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
TTC39B-201ENST00000297615 AMPHP49418 695 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 NLRP6P59044 892 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 ANKRD45Q5TZF3 282 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 PPLO60437 1756 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 BRPF3Q9ULD4 1205 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
TTC39B-201ENST00000297615 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
TTC39B-201ENST00000297615 PTPRMP28827 1452 aa17.14■□□□□ 0.33
TTC39B-201ENST00000297615 FCHSD2O94868 740 aa17.13■□□□□ 0.33
TTC39B-201ENST00000297615 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
TTC39B-201ENST00000297615 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
TTC39B-201ENST00000297615 IL13P35225 146 aa17.12■□□□□ 0.33
TTC39B-201ENST00000297615 UPF2Q9HAU5 1272 aaKnown RBP17.12■□□□□ 0.33
TTC39B-201ENST00000297615 A2ML1A8K2U0 1454 aa17.12■□□□□ 0.33
TTC39B-201ENST00000297615 F6X3S4 739 aa17.12■□□□□ 0.33
TTC39B-201ENST00000297615 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
TTC39B-201ENST00000297615 TNRQ92752 1358 aa17.11■□□□□ 0.33
TTC39B-201ENST00000297615 ALKQ9UM73 1620 aa17.11■□□□□ 0.33
TTC39B-201ENST00000297615 KCNA6P17658 529 aa17.11■□□□□ 0.33
TTC39B-201ENST00000297615 PHF23Q9BUL5 403 aaPredicted RBP17.1■□□□□ 0.33
TTC39B-201ENST00000297615 CD163L1Q9NR16 1453 aa17.1■□□□□ 0.33
TTC39B-201ENST00000297615 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
TTC39B-201ENST00000297615 GSE1Q14687 1217 aa17.1■□□□□ 0.33
TTC39B-201ENST00000297615 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
TTC39B-201ENST00000297615 CLTCQ00610 1675 aaKnown RBP17.08■□□□□ 0.33
TTC39B-201ENST00000297615 VAMP4O75379 141 aa17.08■□□□□ 0.33
TTC39B-201ENST00000297615 ABTB2Q8N961 1025 aa17.08■□□□□ 0.33
TTC39B-201ENST00000297615 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.32
TTC39B-201ENST00000297615 RICTORQ6R327 1708 aa17.08■□□□□ 0.32
TTC39B-201ENST00000297615 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
TTC39B-201ENST00000297615 NGEFQ8N5V2 710 aa17.07■□□□□ 0.32
TTC39B-201ENST00000297615 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
TTC39B-201ENST00000297615 USP19O94966 1318 aa17.07■□□□□ 0.32
TTC39B-201ENST00000297615 SMARCA5O60264 1052 aaPredicted RBP17.07■□□□□ 0.32
TTC39B-201ENST00000297615 ARHGAP31Q2M1Z3 1444 aa17.06■□□□□ 0.32
TTC39B-201ENST00000297615 IFT172Q9UG01 1749 aa17.06■□□□□ 0.32
TTC39B-201ENST00000297615 GZF1Q9H116 711 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms