RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 CAGE1Q8TC20 777 aa18.59■□□□□ 0.57
FNDC1-201ENST00000297267 IL1RAPL2Q9NP60 686 aa18.59■□□□□ 0.57
FNDC1-201ENST00000297267 RNF20Q5VTR2 975 aa18.58■□□□□ 0.57
FNDC1-201ENST00000297267 TWISTNBQ3B726 338 aaPredicted RBP18.58■□□□□ 0.57
FNDC1-201ENST00000297267 RALYLQ86SE5 291 aaKnown RBP18.58■□□□□ 0.57
FNDC1-201ENST00000297267 CFTRP13569 1480 aa18.58■□□□□ 0.56
FNDC1-201ENST00000297267 MNS1Q8NEH6 495 aa18.58■□□□□ 0.56
FNDC1-201ENST00000297267 RAPGEF4Q8WZA2 1011 aa18.58■□□□□ 0.56
FNDC1-201ENST00000297267 CAMK4Q16566 473 aa18.58■□□□□ 0.56
FNDC1-201ENST00000297267 IBSPP21815 317 aaPredicted RBP18.58■□□□□ 0.56
FNDC1-201ENST00000297267 CCDC73Q6ZRK6 1079 aa18.58■□□□□ 0.56
FNDC1-201ENST00000297267 SULT6B1Q6IMI4 303 aa18.57■□□□□ 0.56
FNDC1-201ENST00000297267 NUTM1Q86Y26 1132 aa18.57■□□□□ 0.56
FNDC1-201ENST00000297267 SDF4Q9BRK5 362 aa18.57■□□□□ 0.56
FNDC1-201ENST00000297267 TTC39AQ5SRH9 613 aa18.56■□□□□ 0.56
FNDC1-201ENST00000297267 CWC27Q6UX04 472 aaKnown RBP18.56■□□□□ 0.56
FNDC1-201ENST00000297267 TSPY26PQ9H489 355 aa18.56■□□□□ 0.56
FNDC1-201ENST00000297267 CABP1Q9NZU7 370 aa18.56■□□□□ 0.56
FNDC1-201ENST00000297267 USHBP1Q8N6Y0 703 aa18.56■□□□□ 0.56
FNDC1-201ENST00000297267 CDK19Q9BWU1 502 aa18.56■□□□□ 0.56
FNDC1-201ENST00000297267 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
FNDC1-201ENST00000297267 EPS15P42566 896 aa18.55■□□□□ 0.56
FNDC1-201ENST00000297267 LRRC9Q6ZRR7 1453 aa18.55■□□□□ 0.56
FNDC1-201ENST00000297267 PRDM10Q9NQV6 1147 aa18.55■□□□□ 0.56
FNDC1-201ENST00000297267 BICDL1Q6ZP65 573 aa18.55■□□□□ 0.56
FNDC1-201ENST00000297267 ERC2O15083 957 aa18.55■□□□□ 0.56
FNDC1-201ENST00000297267 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
FNDC1-201ENST00000297267 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
FNDC1-201ENST00000297267 CCDC43Q96MW1 224 aaKnown RBP18.54■□□□□ 0.56
FNDC1-201ENST00000297267 CWC22Q9HCG8 908 aaKnown RBP18.54■□□□□ 0.56
FNDC1-201ENST00000297267 NCOA2Q15596 1464 aa18.54■□□□□ 0.56
FNDC1-201ENST00000297267 FKBP4Q02790 459 aaKnown RBP eCLIP18.54■□□□□ 0.56
FNDC1-201ENST00000297267 CCDC70Q6NSX1 233 aa18.54■□□□□ 0.56
FNDC1-201ENST00000297267 CPLX2Q6PUV4 134 aaKnown RBP18.53■□□□□ 0.56
FNDC1-201ENST00000297267 OLFM4Q6UX06 510 aa18.53■□□□□ 0.56
FNDC1-201ENST00000297267 ATF3P18847 181 aa18.53■□□□□ 0.56
FNDC1-201ENST00000297267 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.53■□□□□ 0.56
FNDC1-201ENST00000297267 NUP133Q8WUM0 1156 aa18.53■□□□□ 0.56
FNDC1-201ENST00000297267 NUCB2P80303 420 aa18.53■□□□□ 0.56
FNDC1-201ENST00000297267 ZHX3Q9H4I2 956 aa18.53■□□□□ 0.56
FNDC1-201ENST00000297267 FAM193AP78312 1265 aa18.52■□□□□ 0.56
FNDC1-201ENST00000297267 CNNM1Q9NRU3 951 aa18.52■□□□□ 0.56
FNDC1-201ENST00000297267 HSP90AB2PQ58FF8 381 aa18.52■□□□□ 0.56
FNDC1-201ENST00000297267 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.56
FNDC1-201ENST00000297267 DDX11Q96FC9 970 aa18.51■□□□□ 0.55
FNDC1-201ENST00000297267 NINLQ9Y2I6 1382 aa18.51■□□□□ 0.55
FNDC1-201ENST00000297267 CT47A1Q5JQC4 288 aaPredicted RBP18.51■□□□□ 0.55
FNDC1-201ENST00000297267 ROCK1Q13464 1354 aa18.51■□□□□ 0.55
FNDC1-201ENST00000297267 RUFY1Q96T51 708 aa18.51■□□□□ 0.55
FNDC1-201ENST00000297267 IPO7O95373 1038 aaKnown RBP18.5■□□□□ 0.55
FNDC1-201ENST00000297267 CCDC39Q9UFE4 941 aa18.5■□□□□ 0.55
FNDC1-201ENST00000297267 SAFBQ15424 915 aaKnown RBP eCLIP18.5■□□□□ 0.55
FNDC1-201ENST00000297267 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
FNDC1-201ENST00000297267 RSPH4AQ5TD94 716 aa18.49■□□□□ 0.55
FNDC1-201ENST00000297267 IGF1RP08069 1367 aa18.49■□□□□ 0.55
FNDC1-201ENST00000297267 ANKRD20A12PQ8NF67 263 aa18.49■□□□□ 0.55
FNDC1-201ENST00000297267 PLCD4Q9BRC7 762 aa18.49■□□□□ 0.55
FNDC1-201ENST00000297267 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.49■□□□□ 0.552e-6■■■■■ 149.1
FNDC1-201ENST00000297267 MCM10Q7L590 875 aa18.49■□□□□ 0.55
FNDC1-201ENST00000297267 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.49■□□□□ 0.55
FNDC1-201ENST00000297267 GPS2Q13227 327 aa18.48■□□□□ 0.55
FNDC1-201ENST00000297267 CCDC30Q5VVM6 783 aa18.48■□□□□ 0.55
FNDC1-201ENST00000297267 ERICH4A6NGS2 130 aa18.48■□□□□ 0.55
FNDC1-201ENST00000297267 TSHZ3Q63HK5 1081 aa18.47■□□□□ 0.55
FNDC1-201ENST00000297267 TMEM132AQ24JP5 1023 aa18.47■□□□□ 0.55
FNDC1-201ENST00000297267 TEX35Q5T0J7 233 aa18.47■□□□□ 0.55
FNDC1-201ENST00000297267 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
FNDC1-201ENST00000297267 ANKRD50Q9ULJ7 1429 aa18.47■□□□□ 0.55
FNDC1-201ENST00000297267 GUCY1B3Q02153 619 aa18.47■□□□□ 0.55
FNDC1-201ENST00000297267 HOOK1Q9UJC3 728 aaKnown RBP18.47■□□□□ 0.55
FNDC1-201ENST00000297267 FBLN1P23142 703 aa18.47■□□□□ 0.55
FNDC1-201ENST00000297267 PIP4K2BP78356 416 aa18.47■□□□□ 0.55
FNDC1-201ENST00000297267 AACSQ86V21 672 aa18.46■□□□□ 0.55
FNDC1-201ENST00000297267 CCDC47Q96A33 483 aaKnown RBP18.46■□□□□ 0.55
FNDC1-201ENST00000297267 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
FNDC1-201ENST00000297267 KIF6Q6ZMV9 814 aa18.46■□□□□ 0.55
FNDC1-201ENST00000297267 SLC26A8Q96RN1 970 aa18.46■□□□□ 0.55
FNDC1-201ENST00000297267 GNAI2P04899 355 aa18.45■□□□□ 0.54
FNDC1-201ENST00000297267 MRE11P49959 708 aa18.45■□□□□ 0.54
FNDC1-201ENST00000297267 TMEM57Q8N5G2 664 aa18.45■□□□□ 0.54
FNDC1-201ENST00000297267 EXOC6BQ9Y2D4 811 aa18.45■□□□□ 0.54
FNDC1-201ENST00000297267 CLASRPQ8N2M8 674 aaKnown RBP18.45■□□□□ 0.54
FNDC1-201ENST00000297267 SERPINC1P01008 464 aa18.44■□□□□ 0.54
FNDC1-201ENST00000297267 UQCRHLA0A096LP55 91 aa18.44■□□□□ 0.54
FNDC1-201ENST00000297267 UQCRHP07919 91 aa18.44■□□□□ 0.54
FNDC1-201ENST00000297267 ARAP1Q96P48 1450 aa18.44■□□□□ 0.54
FNDC1-201ENST00000297267 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
FNDC1-201ENST00000297267 ME1P48163 572 aa18.43■□□□□ 0.54
FNDC1-201ENST00000297267 LRRFIP1Q32MZ4 808 aaKnown RBP18.43■□□□□ 0.54
FNDC1-201ENST00000297267 ODF2Q5BJF6 829 aa18.43■□□□□ 0.54
FNDC1-201ENST00000297267 CHD1LQ86WJ1 897 aa18.43■□□□□ 0.54
FNDC1-201ENST00000297267 SYCE3A1L190 88 aa18.43■□□□□ 0.54
FNDC1-201ENST00000297267 RBM5P52756 815 aaKnown RBP eCLIP18.43■□□□□ 0.54
FNDC1-201ENST00000297267 RAB11FIP4Q86YS3 637 aa18.43■□□□□ 0.54
FNDC1-201ENST00000297267 JAKMIP1Q96N16 626 aaKnown RBP18.43■□□□□ 0.54
FNDC1-201ENST00000297267 CENPHQ9H3R5 247 aa18.43■□□□□ 0.54
FNDC1-201ENST00000297267 BACH2Q9BYV9 841 aa18.42■□□□□ 0.54
FNDC1-201ENST00000297267 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
FNDC1-201ENST00000297267 FERMT3Q86UX7 667 aa18.42■□□□□ 0.54
FNDC1-201ENST00000297267 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms