RNA–Protein interactions for RNA: ENST00000294613.9

TM2D1-201, Transcript of TM2 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM2D1, Length 1,250 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-201ENST00000294613 USP21Q9UK80 565 aa24.75■■□□□ 1.55
TM2D1-201ENST00000294613 NGDNQ8NEJ9 315 aaKnown RBP24.74■■□□□ 1.55
TM2D1-201ENST00000294613 PIK3C2AO00443 1686 aa24.73■■□□□ 1.55
TM2D1-201ENST00000294613 LMOD2Q6P5Q4 547 aa24.73■■□□□ 1.55
TM2D1-201ENST00000294613 QTRT2Q9H974 415 aaKnown RBP24.73■■□□□ 1.55
TM2D1-201ENST00000294613 MON2Q7Z3U7 1717 aa24.72■■□□□ 1.55
TM2D1-201ENST00000294613 PLEKHG5O94827 1062 aa24.72■■□□□ 1.55
TM2D1-201ENST00000294613 CABP2Q9NPB3 220 aa24.72■■□□□ 1.55
TM2D1-201ENST00000294613 ACEP12821 1306 aa24.71■■□□□ 1.55
TM2D1-201ENST00000294613 BRWD3Q6RI45 1802 aa24.71■■□□□ 1.55
TM2D1-201ENST00000294613 CCDC61Q9Y6R9 512 aa24.71■■□□□ 1.55
TM2D1-201ENST00000294613 SBNO2Q9Y2G9 1366 aa24.7■■□□□ 1.55
TM2D1-201ENST00000294613 RBM6P78332 1123 aaKnown RBP24.7■■□□□ 1.54
TM2D1-201ENST00000294613 SRPK2P78362 688 aaKnown RBP24.7■■□□□ 1.54
TM2D1-201ENST00000294613 PLEKHG3A1L390 1219 aa24.69■■□□□ 1.54
TM2D1-201ENST00000294613 TRPC5Q9UL62 973 aaPredicted RBP24.68■■□□□ 1.54
TM2D1-201ENST00000294613 USP6P35125 1406 aa24.66■■□□□ 1.54
TM2D1-201ENST00000294613 HAP1P54257 671 aaPredicted RBP24.65■■□□□ 1.54
TM2D1-201ENST00000294613 LMO7Q8WWI1 1683 aa24.65■■□□□ 1.54
TM2D1-201ENST00000294613 EVC2Q86UK5 1308 aa24.64■■□□□ 1.54
TM2D1-201ENST00000294613 PAK3O75914 559 aaPredicted RBP24.64■■□□□ 1.54
TM2D1-201ENST00000294613 CARD11Q9BXL7 1154 aa24.64■■□□□ 1.54
TM2D1-201ENST00000294613 SSH2Q76I76 1423 aa24.62■■□□□ 1.53
TM2D1-201ENST00000294613 UNC5CLQ8IV45 518 aa24.62■■□□□ 1.53
TM2D1-201ENST00000294613 SLIT3O75094 1523 aa24.61■■□□□ 1.53
TM2D1-201ENST00000294613 USP54Q70EL1 1684 aa24.6■■□□□ 1.53
TM2D1-201ENST00000294613 USP19O94966 1318 aa24.6■■□□□ 1.53
TM2D1-201ENST00000294613 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
TM2D1-201ENST00000294613 FAM83GA6ND36 823 aa24.58■■□□□ 1.53
TM2D1-201ENST00000294613 NUTM2GQ5VZR2 741 aa24.58■■□□□ 1.53
TM2D1-201ENST00000294613 CABP1Q9NZU7 370 aa24.58■■□□□ 1.53
TM2D1-201ENST00000294613 CD163L1Q9NR16 1453 aa24.58■■□□□ 1.52
TM2D1-201ENST00000294613 ATAD2Q6PL18 1390 aa24.57■■□□□ 1.52
TM2D1-201ENST00000294613 KIAA0232Q92628 1395 aa24.57■■□□□ 1.52
TM2D1-201ENST00000294613 THSD7AQ9UPZ6 1657 aa24.57■■□□□ 1.52
TM2D1-201ENST00000294613 GJD4Q96KN9 370 aaPredicted RBP24.57■■□□□ 1.52
TM2D1-201ENST00000294613 CPSF1Q10570 1443 aaKnown RBP24.57■■□□□ 1.52
TM2D1-201ENST00000294613 BRD4O60885 1362 aaPredicted RBP24.55■■□□□ 1.52
TM2D1-201ENST00000294613 UPF1Q92900 1129 aaKnown RBP eCLIP24.55■■□□□ 1.52
TM2D1-201ENST00000294613 COL18A1P39060 1754 aa24.53■■□□□ 1.52
TM2D1-201ENST00000294613 VPS72Q15906 364 aa24.53■■□□□ 1.52
TM2D1-201ENST00000294613 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
TM2D1-201ENST00000294613 CAMTA1Q9Y6Y1 1673 aa24.52■■□□□ 1.52
TM2D1-201ENST00000294613 ABTB2Q8N961 1025 aa24.51■■□□□ 1.51
TM2D1-201ENST00000294613 BTG4Q9NY30 223 aa24.51■■□□□ 1.51
TM2D1-201ENST00000294613 RGPD5Q99666 1765 aa24.51■■□□□ 1.51
TM2D1-201ENST00000294613 WNK3Q9BYP7 1800 aa24.5■■□□□ 1.51
TM2D1-201ENST00000294613 PRDM11Q9NQV5 511 aa24.5■■□□□ 1.51
TM2D1-201ENST00000294613 CPDO75976 1380 aa24.5■■□□□ 1.51
TM2D1-201ENST00000294613 MYOM1P52179 1685 aa24.5■■□□□ 1.51
TM2D1-201ENST00000294613 TESK2Q96S53 571 aa24.49■■□□□ 1.51
TM2D1-201ENST00000294613 USP47Q96K76 1375 aa24.49■■□□□ 1.51
TM2D1-201ENST00000294613 NFAT5O94916 1531 aa24.49■■□□□ 1.51
TM2D1-201ENST00000294613 CHRNA2Q15822 529 aa24.47■■□□□ 1.51
TM2D1-201ENST00000294613 LTN1O94822 1766 aa24.47■■□□□ 1.51
TM2D1-201ENST00000294613 ZC3H6P61129 1189 aaKnown RBP24.46■■□□□ 1.51
TM2D1-201ENST00000294613 KTN1Q86UP2 1357 aaKnown RBP24.45■■□□□ 1.5
TM2D1-201ENST00000294613 TTC21BQ7Z4L5 1316 aa24.44■■□□□ 1.5
TM2D1-201ENST00000294613 ST20-MTHFSA0A0A6YYL1 179 aa24.44■■□□□ 1.5
TM2D1-201ENST00000294613 COL5A2P05997 1499 aaPredicted RBP24.44■■□□□ 1.5
TM2D1-201ENST00000294613 CCDC9Q9Y3X0 531 aaKnown RBP24.43■■□□□ 1.5
TM2D1-201ENST00000294613 A0A1W2PP64 1363 aa24.42■■□□□ 1.5
TM2D1-201ENST00000294613 SPATA31A5Q5VU36 1347 aa24.42■■□□□ 1.5
TM2D1-201ENST00000294613 SPATA31A7Q8IWB4 1347 aa24.42■■□□□ 1.5
TM2D1-201ENST00000294613 NLRP13Q86W25 1043 aa24.42■■□□□ 1.5
TM2D1-201ENST00000294613 GCP02774 474 aa24.4■■□□□ 1.5
TM2D1-201ENST00000294613 SEPT12Q8IYM1 358 aa24.4■■□□□ 1.5
TM2D1-201ENST00000294613 PARP4Q9UKK3 1724 aaKnown RBP24.4■■□□□ 1.5
TM2D1-201ENST00000294613 TTC21AQ8NDW8 1320 aa24.39■■□□□ 1.5
TM2D1-201ENST00000294613 EDC4Q6P2E9 1401 aaKnown RBP24.39■■□□□ 1.5
TM2D1-201ENST00000294613 ONECUT3O60422 494 aaPredicted RBP24.39■■□□□ 1.49
TM2D1-201ENST00000294613 NLRP6P59044 892 aa24.39■■□□□ 1.49
TM2D1-201ENST00000294613 TNS1Q9HBL0 1735 aaKnown RBP24.38■■□□□ 1.49
TM2D1-201ENST00000294613 FAM98CQ17RN3 349 aaKnown RBP24.38■■□□□ 1.49
TM2D1-201ENST00000294613 ABCC6O95255 1503 aa24.38■■□□□ 1.49
TM2D1-201ENST00000294613 KIF20BQ96Q89 1820 aa24.38■■□□□ 1.49
TM2D1-201ENST00000294613 ZNF692Q9BU19 519 aaPredicted RBP24.37■■□□□ 1.49
TM2D1-201ENST00000294613 TIMELESSQ9UNS1 1208 aa24.37■■□□□ 1.49
TM2D1-201ENST00000294613 SPATA31A1Q5TZJ5 1347 aa24.36■■□□□ 1.49
TM2D1-201ENST00000294613 LRRC37A3O60309 1634 aa24.36■■□□□ 1.49
TM2D1-201ENST00000294613 RGPD1P0DJD0 1748 aa24.36■■□□□ 1.49
TM2D1-201ENST00000294613 SLC12A5Q9H2X9 1139 aa24.36■■□□□ 1.49
TM2D1-201ENST00000294613 NINLQ9Y2I6 1382 aa24.36■■□□□ 1.49
TM2D1-201ENST00000294613 OVOS2A0A0J9YW53 1432 aa24.35■■□□□ 1.49
TM2D1-201ENST00000294613 OVOS2Q6IE36 1432 aa24.35■■□□□ 1.49
TM2D1-201ENST00000294613 STRN4Q9NRL3 753 aa24.35■■□□□ 1.49
TM2D1-201ENST00000294613 AATKQ6ZMQ8 1374 aa24.34■■□□□ 1.49
TM2D1-201ENST00000294613 USP31Q70CQ4 1352 aa24.34■■□□□ 1.49
TM2D1-201ENST00000294613 TMC1Q8TDI8 760 aa24.34■■□□□ 1.49
TM2D1-201ENST00000294613 PUS7Q96PZ0 661 aaKnown RBP24.34■■□□□ 1.49
TM2D1-201ENST00000294613 ZRANB1Q9UGI0 708 aa24.33■■□□□ 1.49
TM2D1-201ENST00000294613 CCER1Q8TC90 406 aaPredicted RBP24.32■■□□□ 1.48
TM2D1-201ENST00000294613 NME9Q86XW9 330 aa24.31■■□□□ 1.48
TM2D1-201ENST00000294613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.31■■□□□ 1.48
TM2D1-201ENST00000294613 BLMP54132 1417 aaPredicted RBP24.3■■□□□ 1.48
TM2D1-201ENST00000294613 LARP1Q6PKG0 1096 aaKnown RBP24.3■■□□□ 1.48
TM2D1-201ENST00000294613 CRB1P82279 1406 aa24.29■■□□□ 1.48
TM2D1-201ENST00000294613 A0A0G2JS52 829 aa24.29■■□□□ 1.48
TM2D1-201ENST00000294613 MYT1Q01538 1121 aa24.29■■□□□ 1.48
TM2D1-201ENST00000294613 KRT27Q7Z3Y8 459 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms