RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 NME9Q86XW9 330 aa22.36■■□□□ 1.17
SIM2-201ENST00000290399 MSH5O43196 834 aa22.35■■□□□ 1.17
SIM2-201ENST00000290399 NKTRP30414 1462 aaKnown RBP22.35■■□□□ 1.17
SIM2-201ENST00000290399 SURF6O75683 361 aaKnown RBP22.34■■□□□ 1.17
SIM2-201ENST00000290399 KIAA2012Q0VF49 1180 aa22.34■■□□□ 1.17
SIM2-201ENST00000290399 ZKSCAN1P17029 563 aaPredicted RBP22.34■■□□□ 1.17
SIM2-201ENST00000290399 EMILIN1Q9Y6C2 1016 aa22.34■■□□□ 1.17
SIM2-201ENST00000290399 DUOX2Q9NRD8 1548 aa22.34■■□□□ 1.17
SIM2-201ENST00000290399 HSP90AB4PQ58FF6 505 aa22.34■■□□□ 1.17
SIM2-201ENST00000290399 CHAF1AQ13111 956 aaPredicted RBP22.33■■□□□ 1.17
SIM2-201ENST00000290399 HDGFL1Q5TGJ6 251 aa22.33■■□□□ 1.17
SIM2-201ENST00000290399 DENND4BO75064 1496 aaPredicted RBP22.33■■□□□ 1.17
SIM2-201ENST00000290399 CSPP1Q1MSJ5 1256 aa22.33■■□□□ 1.16
SIM2-201ENST00000290399 DCTN1Q14203 1278 aa22.32■■□□□ 1.16
SIM2-201ENST00000290399 ZNF428Q96B54 188 aa22.32■■□□□ 1.16
SIM2-201ENST00000290399 RIC3Q7Z5B4 369 aa22.32■■□□□ 1.16
SIM2-201ENST00000290399 PARD3Q8TEW0 1356 aa22.32■■□□□ 1.16
SIM2-201ENST00000290399 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
SIM2-201ENST00000290399 CDK11BP21127 795 aaKnown RBP22.31■■□□□ 1.16
SIM2-201ENST00000290399 EIF4G3O43432 1585 aaKnown RBP22.31■■□□□ 1.16
SIM2-201ENST00000290399 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
SIM2-201ENST00000290399 CHD1LQ86WJ1 897 aa22.3■■□□□ 1.16
SIM2-201ENST00000290399 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.3■■□□□ 1.16
SIM2-201ENST00000290399 NUP160Q12769 1436 aa22.3■■□□□ 1.16
SIM2-201ENST00000290399 GNAI2P04899 355 aa22.29■■□□□ 1.16
SIM2-201ENST00000290399 LRPPRCP42704 1394 aaKnown RBP22.29■■□□□ 1.16
SIM2-201ENST00000290399 PER1O15534 1290 aaPredicted RBP22.29■■□□□ 1.16
SIM2-201ENST00000290399 TOMM22Q9NS69 142 aa22.29■■□□□ 1.16
SIM2-201ENST00000290399 ASXL2Q76L83 1435 aa22.29■■□□□ 1.16
SIM2-201ENST00000290399 GTF2E1P29083 439 aaPredicted RBP22.29■■□□□ 1.16
SIM2-201ENST00000290399 PLEKHO1Q53GL0 409 aaPredicted RBP22.29■■□□□ 1.16
SIM2-201ENST00000290399 ATP6V1DQ9Y5K8 247 aa22.29■■□□□ 1.16
SIM2-201ENST00000290399 NUCB2P80303 420 aa22.28■■□□□ 1.16
SIM2-201ENST00000290399 WASLO00401 505 aaPredicted RBP22.28■■□□□ 1.16
SIM2-201ENST00000290399 PHF14O94880 888 aa22.28■■□□□ 1.16
SIM2-201ENST00000290399 SAMD9Q5K651 1589 aa22.28■■□□□ 1.16
SIM2-201ENST00000290399 DNMT1P26358 1616 aaKnown RBP22.28■■□□□ 1.16
SIM2-201ENST00000290399 MAGI3Q5TCQ9 1506 aa22.27■■□□□ 1.16
SIM2-201ENST00000290399 KIF3AQ9Y496 699 aa22.27■■□□□ 1.16
SIM2-201ENST00000290399 ERC2O15083 957 aa22.27■■□□□ 1.16
SIM2-201ENST00000290399 MCM10Q7L590 875 aa22.27■■□□□ 1.16
SIM2-201ENST00000290399 CLASRPQ8N2M8 674 aaKnown RBP22.27■■□□□ 1.16
SIM2-201ENST00000290399 MIS18AQ9NYP9 233 aa22.27■■□□□ 1.16
SIM2-201ENST00000290399 FBLN1P23142 703 aa22.26■■□□□ 1.15
SIM2-201ENST00000290399 SHANK2Q9UPX8 1470 aa22.26■■□□□ 1.15
SIM2-201ENST00000290399 ZNF530Q6P9A1 599 aaPredicted RBP22.25■■□□□ 1.15
SIM2-201ENST00000290399 FAM184AQ8NB25 1140 aa22.25■■□□□ 1.15
SIM2-201ENST00000290399 SYTL4Q96C24 671 aaPredicted RBP22.25■■□□□ 1.15
SIM2-201ENST00000290399 H3BQV1 296 aa22.25■■□□□ 1.15
SIM2-201ENST00000290399 IFFO2Q5TF58 517 aa22.25■■□□□ 1.15
SIM2-201ENST00000290399 CCT4P50991 539 aaKnown RBP22.24■■□□□ 1.15
SIM2-201ENST00000290399 ABCC11Q96J66 1382 aa22.24■■□□□ 1.15
SIM2-201ENST00000290399 ISY1Q9ULR0 285 aaKnown RBP22.24■■□□□ 1.15
SIM2-201ENST00000290399 CEBPAP49715 358 aaPredicted RBP22.24■■□□□ 1.15
SIM2-201ENST00000290399 NEK4P51957 841 aa22.24■■□□□ 1.15
SIM2-201ENST00000290399 MCTP1Q6DN14 999 aa22.24■■□□□ 1.15
SIM2-201ENST00000290399 TULP1O00294 542 aaPredicted RBP22.23■■□□□ 1.15
SIM2-201ENST00000290399 ANKLE2Q86XL3 938 aa22.23■■□□□ 1.15
SIM2-201ENST00000290399 A2MP01023 1474 aa22.23■■□□□ 1.15
SIM2-201ENST00000290399 TRIM27P14373 513 aa22.23■■□□□ 1.15
SIM2-201ENST00000290399 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
SIM2-201ENST00000290399 SF3A1Q15459 793 aaKnown RBP22.22■■□□□ 1.15
SIM2-201ENST00000290399 RNF20Q5VTR2 975 aa22.22■■□□□ 1.15
SIM2-201ENST00000290399 XPCQ01831 940 aaPredicted RBP22.21■■□□□ 1.15
SIM2-201ENST00000290399 ARHGEF12Q9NZN5 1544 aa22.21■■□□□ 1.15
SIM2-201ENST00000290399 FYB1O15117 783 aa22.2■■□□□ 1.14
SIM2-201ENST00000290399 CARD14Q9BXL6 1004 aa22.2■■□□□ 1.14
SIM2-201ENST00000290399 VPS37CA5D8V6 355 aaPredicted RBP22.2■■□□□ 1.14
SIM2-201ENST00000290399 TRAK2O60296 914 aa22.2■■□□□ 1.14
SIM2-201ENST00000290399 NEUROD6Q96NK8 337 aa22.2■■□□□ 1.14
SIM2-201ENST00000290399 WDR7Q9Y4E6 1490 aa22.2■■□□□ 1.14
SIM2-201ENST00000290399 SRCIN1Q9C0H9 1055 aa22.2■■□□□ 1.14
SIM2-201ENST00000290399 IFT57Q9NWB7 429 aa22.2■■□□□ 1.14
SIM2-201ENST00000290399 SMC3Q9UQE7 1217 aa22.2■■□□□ 1.14
SIM2-201ENST00000290399 NSD2O96028 1365 aa22.19■■□□□ 1.14
SIM2-201ENST00000290399 ALDH1L2Q3SY69 923 aa22.19■■□□□ 1.14
SIM2-201ENST00000290399 ASXL1Q8IXJ9 1541 aa22.19■■□□□ 1.14
SIM2-201ENST00000290399 RABEP1Q15276 862 aa22.19■■□□□ 1.14
SIM2-201ENST00000290399 ADGRL2O95490 1459 aa22.18■■□□□ 1.14
SIM2-201ENST00000290399 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
SIM2-201ENST00000290399 RPAP2Q8IXW5 612 aaPredicted RBP22.18■■□□□ 1.14
SIM2-201ENST00000290399 IGHDP01880 384 aa22.17■■□□□ 1.14
SIM2-201ENST00000290399 CNTROBQ8N137 903 aa22.17■■□□□ 1.14
SIM2-201ENST00000290399 LRRCC1Q9C099 1032 aa22.17■■□□□ 1.14
SIM2-201ENST00000290399 POGZQ7Z3K3 1410 aa22.17■■□□□ 1.14
SIM2-201ENST00000290399 LRRFIP1Q32MZ4 808 aaKnown RBP22.17■■□□□ 1.14
SIM2-201ENST00000290399 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
SIM2-201ENST00000290399 UHRF1BP1Q6BDS2 1440 aa22.16■■□□□ 1.14
SIM2-201ENST00000290399 ZNF518AQ6AHZ1 1483 aa22.15■■□□□ 1.14
SIM2-201ENST00000290399 EXOC6BQ9Y2D4 811 aa22.14■■□□□ 1.14
SIM2-201ENST00000290399 RBM33Q96EV2 1170 aaKnown RBP22.14■■□□□ 1.13
SIM2-201ENST00000290399 FSD1Q9BTV5 496 aa22.14■■□□□ 1.13
SIM2-201ENST00000290399 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
SIM2-201ENST00000290399 TATP17735 454 aaPredicted RBP22.13■■□□□ 1.13
SIM2-201ENST00000290399 IL1RAPL2Q9NP60 686 aa22.13■■□□□ 1.13
SIM2-201ENST00000290399 ANKRD36BQ8N2N9 1353 aa22.13■■□□□ 1.13
SIM2-201ENST00000290399 PLEKHH1Q9ULM0 1364 aa22.13■■□□□ 1.13
SIM2-201ENST00000290399 APPP05067 770 aa22.13■■□□□ 1.13
SIM2-201ENST00000290399 PPP6R1Q9UPN7 881 aa22.13■■□□□ 1.13
SIM2-201ENST00000290399 SRGAP3O43295 1099 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms