RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 PDE3AQ14432 1141 aa8.75□□□□□ -1.01
VPS8-201ENST00000287546 RRP7AQ9Y3A4 280 aaKnown RBP8.75□□□□□ -1.01
VPS8-201ENST00000287546 FANCIQ9NVI1 1328 aa8.75□□□□□ -1.01
VPS8-201ENST00000287546 IQGAP1P46940 1657 aa8.75□□□□□ -1.01
VPS8-201ENST00000287546 ZKSCAN2Q63HK3 967 aa8.75□□□□□ -1.01
VPS8-201ENST00000287546 SLC26A8Q96RN1 970 aa8.75□□□□□ -1.01
VPS8-201ENST00000287546 NKTRP30414 1462 aaKnown RBP8.74□□□□□ -1.01
VPS8-201ENST00000287546 WASLO00401 505 aaPredicted RBP8.74□□□□□ -1.01
VPS8-201ENST00000287546 HSPA2P54652 639 aa8.74□□□□□ -1.01
VPS8-201ENST00000287546 RIPK4P57078 832 aa8.74□□□□□ -1.01
VPS8-201ENST00000287546 BECN1Q14457 450 aa8.74□□□□□ -1.01
VPS8-201ENST00000287546 PLIN1O60240 522 aa8.74□□□□□ -1.01
VPS8-201ENST00000287546 AGLP35573 1532 aa8.74□□□□□ -1.01
VPS8-201ENST00000287546 KIF16BQ96L93 1317 aa8.73□□□□□ -1.01
VPS8-201ENST00000287546 FCHSD2O94868 740 aa8.73□□□□□ -1.01
VPS8-201ENST00000287546 NUDT16Q96DE0 195 aaKnown RBP8.73□□□□□ -1.01
VPS8-201ENST00000287546 ZNF330Q9Y3S2 320 aaPredicted RBP8.73□□□□□ -1.01
VPS8-201ENST00000287546 MROH1Q8NDA8 1641 aa8.73□□□□□ -1.01
VPS8-201ENST00000287546 AMPHP49418 695 aa8.73□□□□□ -1.01
VPS8-201ENST00000287546 RGS3P49796 1198 aa8.73□□□□□ -1.01
VPS8-201ENST00000287546 GNAI1P63096 354 aa8.73□□□□□ -1.01
VPS8-201ENST00000287546 CFAP44Q96MT7 982 aa8.73□□□□□ -1.01
VPS8-201ENST00000287546 WWC1Q8IX03 1113 aa8.72□□□□□ -1.01
VPS8-201ENST00000287546 ZNF428Q96B54 188 aa8.72□□□□□ -1.01
VPS8-201ENST00000287546 CARD14Q9BXL6 1004 aa8.72□□□□□ -1.01
VPS8-201ENST00000287546 NOP58Q9Y2X3 529 aaKnown RBP8.72□□□□□ -1.01
VPS8-201ENST00000287546 MAP3K9P80192 1104 aa8.72□□□□□ -1.01
VPS8-201ENST00000287546 SIRT1Q96EB6 747 aa8.72□□□□□ -1.01
VPS8-201ENST00000287546 NRXN1Q9ULB1 1477 aa8.72□□□□□ -1.01
VPS8-201ENST00000287546 RNF123Q5XPI4 1314 aa8.72□□□□□ -1.01
VPS8-201ENST00000287546 CLTCQ00610 1675 aaKnown RBP8.71□□□□□ -1.01
VPS8-201ENST00000287546 DUSP27Q5VZP5 1158 aa8.71□□□□□ -1.01
VPS8-201ENST00000287546 CTDP1Q9Y5B0 961 aaPredicted RBP8.71□□□□□ -1.01
VPS8-201ENST00000287546 SIGLEC1Q9BZZ2 1709 aa8.71□□□□□ -1.01
VPS8-201ENST00000287546 CCDC27Q2M243 656 aa8.71□□□□□ -1.02
VPS8-201ENST00000287546 DDX19BQ9UMR2 479 aa8.71□□□□□ -1.02
VPS8-201ENST00000287546 WAPLQ7Z5K2 1190 aa8.71□□□□□ -1.02
VPS8-201ENST00000287546 ITPRIPQ8IWB1 547 aa8.71□□□□□ -1.02
VPS8-201ENST00000287546 PAK3O75914 559 aaPredicted RBP8.71□□□□□ -1.02
VPS8-201ENST00000287546 ANKLE2Q86XL3 938 aa8.7□□□□□ -1.02
VPS8-201ENST00000287546 SOX12O15370 315 aa8.7□□□□□ -1.02
VPS8-201ENST00000287546 DZIP1LQ8IYY4 767 aaKnown RBP8.7□□□□□ -1.02
VPS8-201ENST00000287546 RBM33Q96EV2 1170 aaKnown RBP8.7□□□□□ -1.02
VPS8-201ENST00000287546 A0A1W2PP64 1363 aa8.7□□□□□ -1.02
VPS8-201ENST00000287546 NUTM2FA1L443 756 aa8.69□□□□□ -1.02
VPS8-201ENST00000287546 FGD1P98174 961 aa8.69□□□□□ -1.02
VPS8-201ENST00000287546 CLUAP1Q96AJ1 413 aa8.69□□□□□ -1.02
VPS8-201ENST00000287546 IL16Q14005 1332 aa8.69□□□□□ -1.02
VPS8-201ENST00000287546 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
VPS8-201ENST00000287546 PPP1R1BQ9UD71 204 aaPredicted RBP8.69□□□□□ -1.02
VPS8-201ENST00000287546 QRICH2Q9H0J4 1663 aa8.69□□□□□ -1.02
VPS8-201ENST00000287546 LTKP29376 864 aa8.69□□□□□ -1.02
VPS8-201ENST00000287546 TMPOP42166 694 aaKnown RBP8.69□□□□□ -1.02
VPS8-201ENST00000287546 OS9Q13438 667 aaPredicted RBP8.69□□□□□ -1.02
VPS8-201ENST00000287546 KDM4FA0A1W2PPD8 638 aa8.68□□□□□ -1.02
VPS8-201ENST00000287546 FYB1O15117 783 aa8.68□□□□□ -1.02
VPS8-201ENST00000287546 PDE4AP27815 886 aa8.68□□□□□ -1.02
VPS8-201ENST00000287546 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
VPS8-201ENST00000287546 IPO9Q96P70 1041 aaKnown RBP8.68□□□□□ -1.02
VPS8-201ENST00000287546 API5Q9BZZ5 524 aaKnown RBP8.68□□□□□ -1.02
VPS8-201ENST00000287546 COG6Q9Y2V7 657 aa8.68□□□□□ -1.02
VPS8-201ENST00000287546 TAOK2Q9UL54 1235 aa8.68□□□□□ -1.02
VPS8-201ENST00000287546 PPLO60437 1756 aa8.68□□□□□ -1.02
VPS8-201ENST00000287546 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
VPS8-201ENST00000287546 TMEM2Q9UHN6 1383 aa8.67□□□□□ -1.02
VPS8-201ENST00000287546 PPIP5K1Q6PFW1 1433 aa8.67□□□□□ -1.02
VPS8-201ENST00000287546 NLRP1Q9C000 1473 aa8.67□□□□□ -1.02
VPS8-201ENST00000287546 STK31Q9BXU1 1019 aa8.67□□□□□ -1.02
VPS8-201ENST00000287546 NEXMIFQ5QGS0 1516 aa8.67□□□□□ -1.02
VPS8-201ENST00000287546 EDC4Q6P2E9 1401 aaKnown RBP8.67□□□□□ -1.02
VPS8-201ENST00000287546 CCAR1Q8IX12 1150 aaKnown RBP8.67□□□□□ -1.02
VPS8-201ENST00000287546 REREQ9P2R6 1566 aa8.67□□□□□ -1.02
VPS8-201ENST00000287546 NFE2L2Q16236 605 aa8.66□□□□□ -1.02
VPS8-201ENST00000287546 CASC1Q6TDU7 716 aa8.66□□□□□ -1.02
VPS8-201ENST00000287546 WDHD1O75717 1129 aaPredicted RBP8.66□□□□□ -1.02
VPS8-201ENST00000287546 TBX22Q9Y458 520 aa8.66□□□□□ -1.02
VPS8-201ENST00000287546 ATP7BP35670 1465 aa8.66□□□□□ -1.02
VPS8-201ENST00000287546 PLEKHH1Q9ULM0 1364 aa8.66□□□□□ -1.02
VPS8-201ENST00000287546 PREX1Q8TCU6 1659 aa8.66□□□□□ -1.02
VPS8-201ENST00000287546 TTC21AQ8NDW8 1320 aa8.66□□□□□ -1.02
VPS8-201ENST00000287546 AMOTL2Q9Y2J4 779 aa8.66□□□□□ -1.02
VPS8-201ENST00000287546 HMOX1P09601 288 aa8.65□□□□□ -1.02
VPS8-201ENST00000287546 NCLP19338 710 aaKnown RBP8.65□□□□□ -1.02
VPS8-201ENST00000287546 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.02
VPS8-201ENST00000287546 BCL2L13Q9BXK5 485 aa8.65□□□□□ -1.02
VPS8-201ENST00000287546 A2ML1A8K2U0 1454 aa8.65□□□□□ -1.02
VPS8-201ENST00000287546 NCKAP5LQ9HCH0 1330 aa8.65□□□□□ -1.02
VPS8-201ENST00000287546 FAM135BQ49AJ0 1406 aa8.65□□□□□ -1.02
VPS8-201ENST00000287546 MROH2AA6NES4 1674 aa8.65□□□□□ -1.02
VPS8-201ENST00000287546 TTC21BQ7Z4L5 1316 aa8.65□□□□□ -1.03
VPS8-201ENST00000287546 NLRP6P59044 892 aa8.65□□□□□ -1.03
VPS8-201ENST00000287546 EXOSC9Q06265 439 aaKnown RBP8.65□□□□□ -1.03
VPS8-201ENST00000287546 RIMS1Q86UR5 1692 aaKnown RBP8.65□□□□□ -1.03
VPS8-201ENST00000287546 PSME1Q06323 249 aa8.64□□□□□ -1.03
VPS8-201ENST00000287546 HDAC5Q9UQL6 1122 aa8.64□□□□□ -1.03
VPS8-201ENST00000287546 MYO3AQ8NEV4 1616 aa8.64□□□□□ -1.03
VPS8-201ENST00000287546 HMMRO75330 724 aa8.64□□□□□ -1.03
VPS8-201ENST00000287546 BCAR3O75815 825 aa8.64□□□□□ -1.03
VPS8-201ENST00000287546 EVA1CP58658 441 aa8.64□□□□□ -1.03
VPS8-201ENST00000287546 FRAT2O75474 233 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms