RNA–Protein interactions for RNA: ENST00000279242.6

MRPL49-201, Transcript of mitochondrial ribosomal protein L49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL49, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-201ENST00000279242 KIF16BQ96L93 1317 aa20.21■□□□□ 0.83
MRPL49-201ENST00000279242 IPO8O15397 1037 aaKnown RBP20.2■□□□□ 0.83
MRPL49-201ENST00000279242 ATF7IPQ6VMQ6 1270 aa20.2■□□□□ 0.83
MRPL49-201ENST00000279242 BCL2L13Q9BXK5 485 aa20.2■□□□□ 0.83
MRPL49-201ENST00000279242 CABP2Q9NPB3 220 aa20.2■□□□□ 0.83
MRPL49-201ENST00000279242 SMC4Q9NTJ3 1288 aa20.2■□□□□ 0.83
MRPL49-201ENST00000279242 CDC42BPGQ6DT37 1551 aa20.2■□□□□ 0.82
MRPL49-201ENST00000279242 PTPRMP28827 1452 aa20.2■□□□□ 0.82
MRPL49-201ENST00000279242 TRIM35Q9UPQ4 493 aa20.19■□□□□ 0.82
MRPL49-201ENST00000279242 TNNQ9UQP3 1299 aa20.19■□□□□ 0.82
MRPL49-201ENST00000279242 ALDH1L2Q3SY69 923 aa20.19■□□□□ 0.82
MRPL49-201ENST00000279242 TMEM131LA2VDJ0 1609 aa20.18■□□□□ 0.82
MRPL49-201ENST00000279242 BRPF1P55201 1214 aaPredicted RBP20.18■□□□□ 0.82
MRPL49-201ENST00000279242 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
MRPL49-201ENST00000279242 SMC5Q8IY18 1101 aa20.18■□□□□ 0.82
MRPL49-201ENST00000279242 TRIM27P14373 513 aa20.17■□□□□ 0.82
MRPL49-201ENST00000279242 SRPK2P78362 688 aaKnown RBP20.17■□□□□ 0.82
MRPL49-201ENST00000279242 CHMP4BQ9H444 224 aaKnown RBP20.17■□□□□ 0.82
MRPL49-201ENST00000279242 BRPF3Q9ULD4 1205 aa20.17■□□□□ 0.82
MRPL49-201ENST00000279242 IDI1Q13907 227 aa20.17■□□□□ 0.82
MRPL49-201ENST00000279242 TBC1D2Q9BYX2 928 aa20.17■□□□□ 0.82
MRPL49-201ENST00000279242 L1TD1Q5T7N2 865 aaKnown RBP20.16■□□□□ 0.82
MRPL49-201ENST00000279242 CD163L1Q9NR16 1453 aa20.16■□□□□ 0.82
MRPL49-201ENST00000279242 PREX1Q8TCU6 1659 aa20.16■□□□□ 0.82
MRPL49-201ENST00000279242 U2SURPO15042 1029 aaKnown RBP20.15■□□□□ 0.82
MRPL49-201ENST00000279242 FYB1O15117 783 aa20.15■□□□□ 0.82
MRPL49-201ENST00000279242 HDGFL2Q7Z4V5 671 aaPredicted RBP20.15■□□□□ 0.82
MRPL49-201ENST00000279242 SSH1Q8WYL5 1049 aa20.15■□□□□ 0.82
MRPL49-201ENST00000279242 PPIP5K1Q6PFW1 1433 aa20.15■□□□□ 0.82
MRPL49-201ENST00000279242 RICTORQ6R327 1708 aa20.15■□□□□ 0.82
MRPL49-201ENST00000279242 DIAPH1O60610 1272 aaKnown RBP20.15■□□□□ 0.82
MRPL49-201ENST00000279242 FCHSD2O94868 740 aa20.15■□□□□ 0.82
MRPL49-201ENST00000279242 KIF20BQ96Q89 1820 aa20.15■□□□□ 0.82
MRPL49-201ENST00000279242 YTHDC2Q9H6S0 1430 aaKnown RBP20.15■□□□□ 0.82
MRPL49-201ENST00000279242 TSR2Q969E8 191 aaKnown RBP20.14■□□□□ 0.81
MRPL49-201ENST00000279242 C22orf23Q9BZE7 217 aa20.13■□□□□ 0.81
MRPL49-201ENST00000279242 ZBTB40Q9NUA8 1239 aa20.13■□□□□ 0.81
MRPL49-201ENST00000279242 ITPRIPQ8IWB1 547 aa20.12■□□□□ 0.81
MRPL49-201ENST00000279242 SLKQ9H2G2 1235 aaPredicted RBP20.12■□□□□ 0.81
MRPL49-201ENST00000279242 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
MRPL49-201ENST00000279242 RIPK4P57078 832 aa20.12■□□□□ 0.81
MRPL49-201ENST00000279242 MYO5BQ9ULV0 1848 aa20.11■□□□□ 0.81
MRPL49-201ENST00000279242 CALD1Q05682 793 aaKnown RBP20.11■□□□□ 0.81
MRPL49-201ENST00000279242 FAM43AQ8N2R8 423 aa20.11■□□□□ 0.81
MRPL49-201ENST00000279242 NOB1Q9ULX3 412 aaKnown RBP20.1■□□□□ 0.81
MRPL49-201ENST00000279242 ARHGEF40Q8TER5 1519 aa20.1■□□□□ 0.81
MRPL49-201ENST00000279242 DLC1Q96QB1 1528 aa20.1■□□□□ 0.81
MRPL49-201ENST00000279242 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
MRPL49-201ENST00000279242 POGKQ9P215 609 aa20.09■□□□□ 0.81
MRPL49-201ENST00000279242 ATP7BP35670 1465 aa20.09■□□□□ 0.81
MRPL49-201ENST00000279242 ARHGAP45Q92619 1136 aa20.09■□□□□ 0.81
MRPL49-201ENST00000279242 NUCB1Q02818 461 aa20.08■□□□□ 0.8
MRPL49-201ENST00000279242 NUTM2DQ5VT03 806 aaPredicted RBP20.08■□□□□ 0.8
MRPL49-201ENST00000279242 PRAM1Q96QH2 718 aa20.08■□□□□ 0.8
MRPL49-201ENST00000279242 RTN4Q9NQC3 1192 aaKnown RBP20.08■□□□□ 0.8
MRPL49-201ENST00000279242 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
MRPL49-201ENST00000279242 FAM135BQ49AJ0 1406 aa20.07■□□□□ 0.8
MRPL49-201ENST00000279242 RAPGEF3O95398 923 aa20.07■□□□□ 0.8
MRPL49-201ENST00000279242 TMEM57Q8N5G2 664 aa20.07■□□□□ 0.8
MRPL49-201ENST00000279242 STK26Q9P289 416 aa20.07■□□□□ 0.8
MRPL49-201ENST00000279242 REREQ9P2R6 1566 aa20.06■□□□□ 0.8
MRPL49-201ENST00000279242 EIF5BO60841 1220 aaKnown RBP20.06■□□□□ 0.8
MRPL49-201ENST00000279242 RBM25P49756 843 aaKnown RBP20.06■□□□□ 0.8
MRPL49-201ENST00000279242 PIK3R4Q99570 1358 aa20.05■□□□□ 0.8
MRPL49-201ENST00000279242 SAFB2Q14151 953 aaKnown RBP eCLIP20.05■□□□□ 0.8
MRPL49-201ENST00000279242 SNX21Q969T3 373 aa20.05■□□□□ 0.8
MRPL49-201ENST00000279242 LRRC7Q96NW7 1537 aa20.05■□□□□ 0.8
MRPL49-201ENST00000279242 MINK1Q8N4C8 1332 aaPredicted RBP20.04■□□□□ 0.8
MRPL49-201ENST00000279242 MCM4P33991 863 aa20.04■□□□□ 0.8
MRPL49-201ENST00000279242 GCC1Q96CN9 775 aa20.04■□□□□ 0.8
MRPL49-201ENST00000279242 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
MRPL49-201ENST00000279242 HSCBQ8IWL3 235 aa20.03■□□□□ 0.8
MRPL49-201ENST00000279242 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
MRPL49-201ENST00000279242 MFAP1P55081 439 aaKnown RBP20.03■□□□□ 0.8
MRPL49-201ENST00000279242 NCOA3Q9Y6Q9 1424 aa20.03■□□□□ 0.8
MRPL49-201ENST00000279242 BMP2KLQ5H9B9 411 aa20.02■□□□□ 0.8
MRPL49-201ENST00000279242 RSPH6AQ9H0K4 717 aa20.02■□□□□ 0.8
MRPL49-201ENST00000279242 PTCH1Q13635 1447 aa20.02■□□□□ 0.8
MRPL49-201ENST00000279242 CHD1LQ86WJ1 897 aa20.02■□□□□ 0.79
MRPL49-201ENST00000279242 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.79
MRPL49-201ENST00000279242 NFE2L2Q16236 605 aa20■□□□□ 0.79
MRPL49-201ENST00000279242 CIZ1Q9ULV3 898 aaPredicted RBP20■□□□□ 0.79
MRPL49-201ENST00000279242 DDX11L8A8MPP1 907 aa20■□□□□ 0.79
MRPL49-201ENST00000279242 GNAI1P63096 354 aa20■□□□□ 0.79
MRPL49-201ENST00000279242 CFAP44Q96MT7 982 aa20■□□□□ 0.79
MRPL49-201ENST00000279242 IFT57Q9NWB7 429 aa20■□□□□ 0.79
MRPL49-201ENST00000279242 CABP1Q9NZU7 370 aa19.99■□□□□ 0.79
MRPL49-201ENST00000279242 YEATS2Q9ULM3 1422 aa19.99■□□□□ 0.79
MRPL49-201ENST00000279242 KIF24Q5T7B8 1368 aa19.98■□□□□ 0.79
MRPL49-201ENST00000279242 FSD2A1L4K1 749 aa19.98■□□□□ 0.79
MRPL49-201ENST00000279242 PTMSP20962 102 aa19.98■□□□□ 0.79
MRPL49-201ENST00000279242 LMOD3Q0VAK6 560 aa19.98■□□□□ 0.79
MRPL49-201ENST00000279242 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
MRPL49-201ENST00000279242 AATKQ6ZMQ8 1374 aa19.98■□□□□ 0.79
MRPL49-201ENST00000279242 CDK12Q9NYV4 1490 aaPredicted RBP19.97■□□□□ 0.79
MRPL49-201ENST00000279242 ZBTB7BO15156 539 aaPredicted RBP19.97■□□□□ 0.79
MRPL49-201ENST00000279242 PRKAR2BP31323 418 aa19.97■□□□□ 0.79
MRPL49-201ENST00000279242 EDC4Q6P2E9 1401 aaKnown RBP19.97■□□□□ 0.79
MRPL49-201ENST00000279242 GOLGA6L3A6NEY3 463 aa19.97■□□□□ 0.79
MRPL49-201ENST00000279242 MAP2P11137 1827 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms