RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 KDM3BQ7LBC6 1761 aa5.54□□□□□ -1.52
PHTF2-202ENST00000275575 CENPFP49454 3210 aa5.53□□□□□ -1.52
PHTF2-202ENST00000275575 ZNF777Q9ULD5 760 aaPredicted RBP5.53□□□□□ -1.52
PHTF2-202ENST00000275575 THSD7BQ9C0I4 1608 aa5.53□□□□□ -1.52
PHTF2-202ENST00000275575 SPATA31A3Q5VYP0 1347 aa5.53□□□□□ -1.52
PHTF2-202ENST00000275575 PAPPA2Q9BXP8 1791 aa5.53□□□□□ -1.52
PHTF2-202ENST00000275575 COL11A2P13942 1736 aaPredicted RBP5.52□□□□□ -1.53
PHTF2-202ENST00000275575 RANGAP1P46060 587 aaPredicted RBP5.52□□□□□ -1.53
PHTF2-202ENST00000275575 LAMB2P55268 1798 aa5.52□□□□□ -1.53
PHTF2-202ENST00000275575 DISP3Q9P2K9 1392 aa5.52□□□□□ -1.53
PHTF2-202ENST00000275575 SCN7AQ01118 1682 aa5.52□□□□□ -1.53
PHTF2-202ENST00000275575 SPTBN5Q9NRC6 3674 aaKnown RBP5.52□□□□□ -1.53
PHTF2-202ENST00000275575 C19orf44Q9H6X5 657 aa5.51□□□□□ -1.53
PHTF2-202ENST00000275575 CCDC144AA2RUR9 1427 aa5.51□□□□□ -1.53
PHTF2-202ENST00000275575 MRC1P22897 1456 aa5.51□□□□□ -1.53
PHTF2-202ENST00000275575 AMOTL2Q9Y2J4 779 aa5.51□□□□□ -1.53
PHTF2-202ENST00000275575 COL3A1P02461 1466 aaPredicted RBP5.51□□□□□ -1.53
PHTF2-202ENST00000275575 SLC26A8Q96RN1 970 aa5.51□□□□□ -1.53
PHTF2-202ENST00000275575 USP31Q70CQ4 1352 aa5.51□□□□□ -1.53
PHTF2-202ENST00000275575 RBM33Q96EV2 1170 aaKnown RBP5.5□□□□□ -1.53
PHTF2-202ENST00000275575 LAMB4A4D0S4 1761 aa5.5□□□□□ -1.53
PHTF2-202ENST00000275575 DDX17Q92841 729 aaKnown RBP5.5□□□□□ -1.53
PHTF2-202ENST00000275575 KANK1Q14678 1352 aa5.5□□□□□ -1.53
PHTF2-202ENST00000275575 N4BP2Q86UW6 1770 aaPredicted RBP5.5□□□□□ -1.53
PHTF2-202ENST00000275575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.49□□□□□ -1.53
PHTF2-202ENST00000275575 HNRNPUL2Q1KMD3 747 aaKnown RBP5.49□□□□□ -1.53
PHTF2-202ENST00000275575 SGIP1Q9BQI5 828 aa5.49□□□□□ -1.53
PHTF2-202ENST00000275575 REV3LO60673 3130 aa5.49□□□□□ -1.53
PHTF2-202ENST00000275575 MSH6P52701 1360 aa5.49□□□□□ -1.53
PHTF2-202ENST00000275575 UBAP1LF5GYI3 381 aa5.49□□□□□ -1.53
PHTF2-202ENST00000275575 TSPY4P0CV99 314 aa5.49□□□□□ -1.53
PHTF2-202ENST00000275575 TSPY10P0CW01 314 aa5.49□□□□□ -1.53
PHTF2-202ENST00000275575 FER1L6Q2WGJ9 1857 aa5.49□□□□□ -1.53
PHTF2-202ENST00000275575 PSME4Q14997 1843 aa5.48□□□□□ -1.53
PHTF2-202ENST00000275575 USP6P35125 1406 aa5.48□□□□□ -1.53
PHTF2-202ENST00000275575 ORAI2Q96SN7 254 aa5.48□□□□□ -1.53
PHTF2-202ENST00000275575 LRRC37AA6NMS7 1700 aa5.48□□□□□ -1.53
PHTF2-202ENST00000275575 MKI67P46013 3256 aaKnown RBP5.48□□□□□ -1.53
PHTF2-202ENST00000275575 CACNA1SQ13698 1873 aa5.47□□□□□ -1.53
PHTF2-202ENST00000275575 TOM1O60784 492 aa5.47□□□□□ -1.53
PHTF2-202ENST00000275575 MPHOSPH9Q99550 1183 aa5.46□□□□□ -1.53
PHTF2-202ENST00000275575 EYSQ5T1H1 3165 aa5.46□□□□□ -1.54
PHTF2-202ENST00000275575 COL4A1P02462 1669 aa5.45□□□□□ -1.54
PHTF2-202ENST00000275575 CHIC2Q9UKJ5 165 aa5.45□□□□□ -1.54
PHTF2-202ENST00000275575 ANKRD36CQ5JPF3 1778 aa5.45□□□□□ -1.54
PHTF2-202ENST00000275575 TIAM2Q8IVF5 1701 aa5.45□□□□□ -1.54
PHTF2-202ENST00000275575 CCDC88AQ3V6T2 1871 aa5.45□□□□□ -1.54
PHTF2-202ENST00000275575 PLEKHG3A1L390 1219 aa5.44□□□□□ -1.54
PHTF2-202ENST00000275575 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.44□□□□□ -1.54
PHTF2-202ENST00000275575 SNED1Q8TER0 1413 aa5.44□□□□□ -1.54
PHTF2-202ENST00000275575 BRD4O60885 1362 aaPredicted RBP5.44□□□□□ -1.54
PHTF2-202ENST00000275575 TESK2Q96S53 571 aa5.44□□□□□ -1.54
PHTF2-202ENST00000275575 BLMP54132 1417 aaPredicted RBP5.44□□□□□ -1.54
PHTF2-202ENST00000275575 KCPQ6ZWJ8 1503 aa5.43□□□□□ -1.54
PHTF2-202ENST00000275575 FOXD1Q16676 465 aa5.43□□□□□ -1.54
PHTF2-202ENST00000275575 PROM2Q8N271 834 aa5.43□□□□□ -1.54
PHTF2-202ENST00000275575 DDX60Q8IY21 1712 aaKnown RBP5.42□□□□□ -1.54
PHTF2-202ENST00000275575 MUC3AQ02505 3323 aa5.42□□□□□ -1.54
PHTF2-202ENST00000275575 SPATA31A5Q5VU36 1347 aa5.42□□□□□ -1.54
PHTF2-202ENST00000275575 SPATA31A7Q8IWB4 1347 aa5.42□□□□□ -1.54
PHTF2-202ENST00000275575 KIAA0232Q92628 1395 aa5.42□□□□□ -1.54
PHTF2-202ENST00000275575 PLEKHG2Q9H7P9 1386 aa5.42□□□□□ -1.54
PHTF2-202ENST00000275575 MAP3K5Q99683 1374 aa5.42□□□□□ -1.54
PHTF2-202ENST00000275575 FAM83GA6ND36 823 aa5.42□□□□□ -1.54
PHTF2-202ENST00000275575 WAPLQ7Z5K2 1190 aa5.42□□□□□ -1.54
PHTF2-202ENST00000275575 AFF2P51816 1311 aa5.41□□□□□ -1.54
PHTF2-202ENST00000275575 ACIN1Q9UKV3 1341 aaKnown RBP5.41□□□□□ -1.54
PHTF2-202ENST00000275575 TNS2Q63HR2 1409 aa5.41□□□□□ -1.54
PHTF2-202ENST00000275575 NBPF8Q3BBV2 869 aa5.41□□□□□ -1.54
PHTF2-202ENST00000275575 CADPS2Q86UW7 1296 aa5.41□□□□□ -1.54
PHTF2-202ENST00000275575 ADCY9O60503 1353 aa5.41□□□□□ -1.54
PHTF2-202ENST00000275575 TAF1P21675 1872 aa5.41□□□□□ -1.54
PHTF2-202ENST00000275575 PRUNE2Q8WUY3 3088 aa5.4□□□□□ -1.54
PHTF2-202ENST00000275575 VPS72Q15906 364 aa5.4□□□□□ -1.54
PHTF2-202ENST00000275575 CAMKK2Q96RR4 588 aa5.4□□□□□ -1.54
PHTF2-202ENST00000275575 MEGF6O75095 1541 aa5.4□□□□□ -1.55
PHTF2-202ENST00000275575 TNRC6CQ9HCJ0 1690 aaKnown RBP5.39□□□□□ -1.55
PHTF2-202ENST00000275575 SPATA31A1Q5TZJ5 1347 aa5.39□□□□□ -1.55
PHTF2-202ENST00000275575 ATAD2Q6PL18 1390 aa5.39□□□□□ -1.55
PHTF2-202ENST00000275575 EHMT2Q96KQ7 1210 aa5.39□□□□□ -1.55
PHTF2-202ENST00000275575 SZT2Q5T011 3432 aa5.39□□□□□ -1.55
PHTF2-202ENST00000275575 PTF1AQ7RTS3 328 aa5.38□□□□□ -1.55
PHTF2-202ENST00000275575 KDRP35968 1356 aa5.38□□□□□ -1.55
PHTF2-202ENST00000275575 CFAP70Q5T0N1 1121 aa5.38□□□□□ -1.55
PHTF2-202ENST00000275575 WDR90Q96KV7 1748 aa5.38□□□□□ -1.55
PHTF2-202ENST00000275575 AXIN2Q9Y2T1 843 aa5.37□□□□□ -1.55
PHTF2-202ENST00000275575 NSD3Q9BZ95 1437 aa5.37□□□□□ -1.55
PHTF2-202ENST00000275575 NBPF1Q3BBV0 1214 aa5.36□□□□□ -1.55
PHTF2-202ENST00000275575 NUTM2DQ5VT03 806 aaPredicted RBP5.36□□□□□ -1.55
PHTF2-202ENST00000275575 BARGINQ6ZT62 677 aa5.36□□□□□ -1.55
PHTF2-202ENST00000275575 NUP98P52948 1817 aa5.36□□□□□ -1.55
PHTF2-202ENST00000275575 OVOS2A0A0G2JMS6 1433 aa5.36□□□□□ -1.55
PHTF2-202ENST00000275575 PTGER2P43116 358 aa5.36□□□□□ -1.55
PHTF2-202ENST00000275575 PROSER2Q86WR7 435 aaPredicted RBP5.36□□□□□ -1.55
PHTF2-202ENST00000275575 PPIP5K1Q6PFW1 1433 aa5.35□□□□□ -1.55
PHTF2-202ENST00000275575 GJD4Q96KN9 370 aaPredicted RBP5.35□□□□□ -1.55
PHTF2-202ENST00000275575 KDM6AO15550 1401 aaPredicted RBP5.35□□□□□ -1.55
PHTF2-202ENST00000275575 CRB1P82279 1406 aa5.35□□□□□ -1.55
PHTF2-202ENST00000275575 ARHGEF10O15013 1369 aa5.35□□□□□ -1.55
PHTF2-202ENST00000275575 TMEM132EQ6IEE7 984 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms