RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 NBPF8Q3BBV2 869 aa25.26■■□□□ 1.63
CSNK1D-201ENST00000269361 L3MBTL2Q969R5 705 aa25.26■■□□□ 1.63
CSNK1D-201ENST00000269361 PLCH1Q4KWH8 1693 aa25.26■■□□□ 1.63
CSNK1D-201ENST00000269361 NWD2Q9ULI1 1742 aa25.26■■□□□ 1.63
CSNK1D-201ENST00000269361 ACEP12821 1306 aa25.25■■□□□ 1.63
CSNK1D-201ENST00000269361 POLR3AO14802 1390 aaPredicted RBP25.24■■□□□ 1.63
CSNK1D-201ENST00000269361 CENPJQ9HC77 1338 aaPredicted RBP25.23■■□□□ 1.63
CSNK1D-201ENST00000269361 PRDM11Q9NQV5 511 aa25.23■■□□□ 1.63
CSNK1D-201ENST00000269361 KRT27Q7Z3Y8 459 aa25.22■■□□□ 1.63
CSNK1D-201ENST00000269361 SIN3AQ96ST3 1273 aa25.22■■□□□ 1.63
CSNK1D-201ENST00000269361 SRPK2P78362 688 aaKnown RBP25.21■■□□□ 1.63
CSNK1D-201ENST00000269361 BLMP54132 1417 aaPredicted RBP25.2■■□□□ 1.63
CSNK1D-201ENST00000269361 FAM98CQ17RN3 349 aaKnown RBP25.2■■□□□ 1.62
CSNK1D-201ENST00000269361 NUTM2GQ5VZR2 741 aa25.2■■□□□ 1.62
CSNK1D-201ENST00000269361 ZRANB1Q9UGI0 708 aa25.2■■□□□ 1.62
CSNK1D-201ENST00000269361 ITSN1Q15811 1721 aa25.2■■□□□ 1.62
CSNK1D-201ENST00000269361 COL14A1Q05707 1796 aaKnown RBP25.19■■□□□ 1.62
CSNK1D-201ENST00000269361 A0A0G2JS52 829 aa25.19■■□□□ 1.62
CSNK1D-201ENST00000269361 MYT1Q01538 1121 aa25.19■■□□□ 1.62
CSNK1D-201ENST00000269361 NEUROD1Q13562 356 aa25.18■■□□□ 1.62
CSNK1D-201ENST00000269361 CABP2Q9NPB3 220 aa25.18■■□□□ 1.62
CSNK1D-201ENST00000269361 KIAA0232Q92628 1395 aa25.18■■□□□ 1.62
CSNK1D-201ENST00000269361 SPATA31A5Q5VU36 1347 aa25.17■■□□□ 1.62
CSNK1D-201ENST00000269361 SPATA31A7Q8IWB4 1347 aa25.17■■□□□ 1.62
CSNK1D-201ENST00000269361 ZC3H6P61129 1189 aaKnown RBP25.16■■□□□ 1.62
CSNK1D-201ENST00000269361 CHRNA2Q15822 529 aa25.16■■□□□ 1.62
CSNK1D-201ENST00000269361 ABTB2Q8N961 1025 aa25.16■■□□□ 1.62
CSNK1D-201ENST00000269361 NRAPQ86VF7 1730 aa25.15■■□□□ 1.62
CSNK1D-201ENST00000269361 SF3B2Q13435 895 aaKnown RBP25.15■■□□□ 1.62
CSNK1D-201ENST00000269361 TOPAZ1Q8N9V7 1692 aa25.14■■□□□ 1.62
CSNK1D-201ENST00000269361 PPIP5K1Q6PFW1 1433 aa25.14■■□□□ 1.62
CSNK1D-201ENST00000269361 CRYBG1Q9Y4K1 1723 aa25.13■■□□□ 1.61
CSNK1D-201ENST00000269361 DEFB132Q7Z7B7 95 aa25.13■■□□□ 1.61
CSNK1D-201ENST00000269361 BRWD3Q6RI45 1802 aa25.12■■□□□ 1.61
CSNK1D-201ENST00000269361 CABP1Q9NZU7 370 aa25.11■■□□□ 1.61
CSNK1D-201ENST00000269361 STRN4Q9NRL3 753 aa25.1■■□□□ 1.61
CSNK1D-201ENST00000269361 SPATA31A1Q5TZJ5 1347 aa25.1■■□□□ 1.61
CSNK1D-201ENST00000269361 NLRP13Q86W25 1043 aa25.09■■□□□ 1.61
CSNK1D-201ENST00000269361 SRCAPQ6ZRS2 3230 aa25.09■■□□□ 1.61
CSNK1D-201ENST00000269361 USP19O94966 1318 aa25.09■■□□□ 1.61
CSNK1D-201ENST00000269361 EVC2Q86UK5 1308 aa25.08■■□□□ 1.6
CSNK1D-201ENST00000269361 BRD4O60885 1362 aaPredicted RBP25.07■■□□□ 1.6
CSNK1D-201ENST00000269361 ROCK2O75116 1388 aaKnown RBP25.07■■□□□ 1.6
CSNK1D-201ENST00000269361 EVA1CP58658 441 aa25.07■■□□□ 1.6
CSNK1D-201ENST00000269361 PHRF1Q9P1Y6 1649 aaKnown RBP25.06■■□□□ 1.6
CSNK1D-201ENST00000269361 GCP02774 474 aa25.06■■□□□ 1.6
CSNK1D-201ENST00000269361 CPDO75976 1380 aa25.05■■□□□ 1.6
CSNK1D-201ENST00000269361 FAM182BQ5T319 152 aa25.05■■□□□ 1.6
CSNK1D-201ENST00000269361 QRICH2Q9H0J4 1663 aa25.04■■□□□ 1.6
CSNK1D-201ENST00000269361 USP6P35125 1406 aa25.03■■□□□ 1.6
CSNK1D-201ENST00000269361 TRPM1Q7Z4N2 1603 aa25.02■■□□□ 1.6
CSNK1D-201ENST00000269361 BAG6P46379 1132 aa25.02■■□□□ 1.6
CSNK1D-201ENST00000269361 USP35Q9P2H5 1018 aa25.02■■□□□ 1.6
CSNK1D-201ENST00000269361 NLRP6P59044 892 aa25.01■■□□□ 1.59
CSNK1D-201ENST00000269361 LARP1Q6PKG0 1096 aaKnown RBP25.01■■□□□ 1.59
CSNK1D-201ENST00000269361 SSH2Q76I76 1423 aa25.01■■□□□ 1.59
CSNK1D-201ENST00000269361 NRKQ7Z2Y5 1582 aa25.01■■□□□ 1.59
CSNK1D-201ENST00000269361 THSD7AQ9UPZ6 1657 aa25■■□□□ 1.59
CSNK1D-201ENST00000269361 CAMTA1Q9Y6Y1 1673 aa25■■□□□ 1.59
CSNK1D-201ENST00000269361 BARGINQ6ZT62 677 aa24.99■■□□□ 1.59
CSNK1D-201ENST00000269361 ZNF692Q9BU19 519 aaPredicted RBP24.97■■□□□ 1.59
CSNK1D-201ENST00000269361 TCP11L2Q8N4U5 519 aa24.96■■□□□ 1.59
CSNK1D-201ENST00000269361 FAM196AQ6ZSG2 479 aa24.95■■□□□ 1.58
CSNK1D-201ENST00000269361 ZBTB7CA1YPR0 619 aa24.94■■□□□ 1.58
CSNK1D-201ENST00000269361 EN1Q05925 392 aaPredicted RBP24.94■■□□□ 1.58
CSNK1D-201ENST00000269361 PDE3BQ13370 1112 aa24.93■■□□□ 1.58
CSNK1D-201ENST00000269361 THRAP3Q9Y2W1 955 aaKnown RBP24.93■■□□□ 1.58
CSNK1D-201ENST00000269361 LMO7Q8WWI1 1683 aa24.93■■□□□ 1.58
CSNK1D-201ENST00000269361 TTC21BQ7Z4L5 1316 aa24.92■■□□□ 1.58
CSNK1D-201ENST00000269361 CARD11Q9BXL7 1154 aa24.92■■□□□ 1.58
CSNK1D-201ENST00000269361 AATKQ6ZMQ8 1374 aa24.92■■□□□ 1.58
CSNK1D-201ENST00000269361 COL5A2P05997 1499 aaPredicted RBP24.9■■□□□ 1.58
CSNK1D-201ENST00000269361 TRIM37O94972 964 aa24.9■■□□□ 1.58
CSNK1D-201ENST00000269361 SLIT3O75094 1523 aa24.9■■□□□ 1.58
CSNK1D-201ENST00000269361 DISP2A7MBM2 1401 aa24.88■■□□□ 1.57
CSNK1D-201ENST00000269361 CPSF1Q10570 1443 aaKnown RBP24.88■■□□□ 1.57
CSNK1D-201ENST00000269361 TONSLQ96HA7 1378 aa24.88■■□□□ 1.57
CSNK1D-201ENST00000269361 SBNO2Q9Y2G9 1366 aa24.88■■□□□ 1.57
CSNK1D-201ENST00000269361 TTC21AQ8NDW8 1320 aa24.87■■□□□ 1.57
CSNK1D-201ENST00000269361 KCNH5Q8NCM2 988 aa24.87■■□□□ 1.57
CSNK1D-201ENST00000269361 CRB1P82279 1406 aa24.86■■□□□ 1.57
CSNK1D-201ENST00000269361 KTN1Q86UP2 1357 aaKnown RBP24.86■■□□□ 1.57
CSNK1D-201ENST00000269361 PSDA5PKW4 1024 aaPredicted RBP24.86■■□□□ 1.57
CSNK1D-201ENST00000269361 EZH2Q15910 746 aaKnown RBP24.85■■□□□ 1.57
CSNK1D-201ENST00000269361 ARHGEF25Q86VW2 580 aa24.85■■□□□ 1.57
CSNK1D-201ENST00000269361 AXIN2Q9Y2T1 843 aa24.85■■□□□ 1.57
CSNK1D-201ENST00000269361 RGPD1P0DJD0 1748 aa24.85■■□□□ 1.57
CSNK1D-201ENST00000269361 PIK3C2AO00443 1686 aa24.85■■□□□ 1.57
CSNK1D-201ENST00000269361 APBA3O96018 575 aa24.84■■□□□ 1.57
CSNK1D-201ENST00000269361 CAMKK2Q96RR4 588 aa24.84■■□□□ 1.57
CSNK1D-201ENST00000269361 SOX12O15370 315 aa24.83■■□□□ 1.57
CSNK1D-201ENST00000269361 TOM1L2Q6ZVM7 507 aa24.83■■□□□ 1.57
CSNK1D-201ENST00000269361 TMC1Q8TDI8 760 aa24.8■■□□□ 1.56
CSNK1D-201ENST00000269361 WDR17Q8IZU2 1322 aa24.8■■□□□ 1.56
CSNK1D-201ENST00000269361 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
CSNK1D-201ENST00000269361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.79■■□□□ 1.562e-7■■□□□ 13.2
CSNK1D-201ENST00000269361 TNS1Q9HBL0 1735 aaKnown RBP24.78■■□□□ 1.56
CSNK1D-201ENST00000269361 C11orf95C9JLR9 678 aaPredicted RBP24.78■■□□□ 1.56
CSNK1D-201ENST00000269361 R3HDM1Q15032 1099 aaKnown RBP24.78■■□□□ 1.56
CSNK1D-201ENST00000269361 PARD3Q8TEW0 1356 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms