RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 K7ELQ4 463 aaPredicted RBP9.48□□□□□ -0.89
CLTC-201ENST00000269122 CCDC192P0DO97 292 aa9.48□□□□□ -0.89
CLTC-201ENST00000269122 TRDNQ13061 729 aa9.48□□□□□ -0.89
CLTC-201ENST00000269122 ZSCAN30Q86W11 494 aa9.48□□□□□ -0.89
CLTC-201ENST00000269122 WASHC2AQ641Q2 1341 aa9.48□□□□□ -0.89
CLTC-201ENST00000269122 GOLGA6L10A6NI86 522 aa9.48□□□□□ -0.89
CLTC-201ENST00000269122 LETM1O95202 739 aaPredicted RBP9.48□□□□□ -0.89
CLTC-201ENST00000269122 WASHC4Q2M389 1173 aa9.48□□□□□ -0.89
CLTC-201ENST00000269122 KIF7Q2M1P5 1343 aa9.47□□□□□ -0.89
CLTC-201ENST00000269122 GOLGA6L10A0A0M3HER8 536 aa9.47□□□□□ -0.89
CLTC-201ENST00000269122 CPLX2Q6PUV4 134 aaKnown RBP9.47□□□□□ -0.89
CLTC-201ENST00000269122 RBM27Q9P2N5 1060 aaKnown RBP9.47□□□□□ -0.89
CLTC-201ENST00000269122 NOB1Q9ULX3 412 aaKnown RBP9.47□□□□□ -0.89
CLTC-201ENST00000269122 CCDC181Q5TID7 509 aa9.47□□□□□ -0.89
CLTC-201ENST00000269122 MBD3O95983 291 aa9.47□□□□□ -0.89
CLTC-201ENST00000269122 ME1P48163 572 aa9.47□□□□□ -0.89
CLTC-201ENST00000269122 TSR2Q969E8 191 aaKnown RBP9.47□□□□□ -0.89
CLTC-201ENST00000269122 BCCIPQ9P287 314 aaKnown RBP eCLIP9.47□□□□□ -0.89
CLTC-201ENST00000269122 RNF187Q5TA31 235 aaPredicted RBP9.46□□□□□ -0.89
CLTC-201ENST00000269122 CCDC47Q96A33 483 aaKnown RBP9.46□□□□□ -0.89
CLTC-201ENST00000269122 WASHC2CQ9Y4E1 1318 aa9.46□□□□□ -0.89
CLTC-201ENST00000269122 DNA2P51530 1060 aa9.46□□□□□ -0.89
CLTC-201ENST00000269122 CLASRPQ8N2M8 674 aaKnown RBP9.46□□□□□ -0.89
CLTC-201ENST00000269122 PANK2Q9BZ23 570 aa9.46□□□□□ -0.89
CLTC-201ENST00000269122 CARMIL1Q5VZK9 1371 aa9.46□□□□□ -0.9
CLTC-201ENST00000269122 ERICH2A1L162 156 aa9.46□□□□□ -0.9
CLTC-201ENST00000269122 G3BP1Q13283 466 aaKnown RBP eCLIP9.45□□□□□ -0.94e-8■■■■□ 21.5
CLTC-201ENST00000269122 TMCO3Q6UWJ1 677 aa9.45□□□□□ -0.9
CLTC-201ENST00000269122 DDX54Q8TDD1 881 aaKnown RBP9.45□□□□□ -0.9
CLTC-201ENST00000269122 GDPD2Q9HCC8 539 aa9.45□□□□□ -0.9
CLTC-201ENST00000269122 MINK1Q8N4C8 1332 aaPredicted RBP9.45□□□□□ -0.9
CLTC-201ENST00000269122 GTF2A1P52655 376 aaPredicted RBP9.45□□□□□ -0.9
CLTC-201ENST00000269122 SMARCE1Q969G3 411 aa9.45□□□□□ -0.9
CLTC-201ENST00000269122 CCDC113Q9H0I3 377 aa9.45□□□□□ -0.9
CLTC-201ENST00000269122 SAFBQ15424 915 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLTC-201ENST00000269122 EIF3JO75822 258 aaKnown RBP9.44□□□□□ -0.9
CLTC-201ENST00000269122 EID1Q9Y6B2 187 aa9.44□□□□□ -0.9
CLTC-201ENST00000269122 SEPT7Q16181 437 aaKnown RBP9.44□□□□□ -0.9
CLTC-201ENST00000269122 AEBP2Q6ZN18 517 aaPredicted RBP9.44□□□□□ -0.9
CLTC-201ENST00000269122 USP25Q9UHP3 1055 aa9.44□□□□□ -0.9
CLTC-201ENST00000269122 RUNDC1Q96C34 613 aa9.44□□□□□ -0.9
CLTC-201ENST00000269122 NOL10Q9BSC4 688 aaKnown RBP9.44□□□□□ -0.9
CLTC-201ENST00000269122 CCDC7Q96M83 1385 aa9.44□□□□□ -0.9
CLTC-201ENST00000269122 PPFIBP1Q86W92 1011 aa9.44□□□□□ -0.9
CLTC-201ENST00000269122 UBXN4Q92575 508 aa9.44□□□□□ -0.9
CLTC-201ENST00000269122 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 CNTLNQ9NXG0 1405 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 LMAN1P49257 510 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 RALYLQ86SE5 291 aaKnown RBP9.43□□□□□ -0.9
CLTC-201ENST00000269122 VPS37DQ86XT2 251 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 CNTROBQ8N137 903 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 FSD1Q9BTV5 496 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 ZSWIM4Q9H7M6 989 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 TDRD9Q8NDG6 1382 aaKnown RBP9.43□□□□□ -0.9
CLTC-201ENST00000269122 MAGEC2Q9UBF1 373 aaPredicted RBP9.43□□□□□ -0.9
CLTC-201ENST00000269122 URI1O94763 535 aaPredicted RBP9.43□□□□□ -0.9
CLTC-201ENST00000269122 FILIP1LQ4L180 1135 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 PIBF1Q8WXW3 757 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 RAI14Q9P0K7 980 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 PPP1R1BQ9UD71 204 aaPredicted RBP9.43□□□□□ -0.9
CLTC-201ENST00000269122 TSPYL4Q9UJ04 414 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 CCDC18Q5T9S5 1454 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 ATP2C2O75185 946 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 STK38Q15208 465 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 PTPN14Q15678 1187 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 C20orf194Q5TEA3 1177 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 CYB5RLQ6IPT4 315 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 CFAP45Q9UL16 551 aa9.43□□□□□ -0.9
CLTC-201ENST00000269122 SSFA2P28290 1259 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 CCAR1Q8IX12 1150 aaKnown RBP9.42□□□□□ -0.9
CLTC-201ENST00000269122 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.42□□□□□ -0.92e-10■□□□□ 10.7
CLTC-201ENST00000269122 V9GYY5 206 aaPredicted RBP9.42□□□□□ -0.9
CLTC-201ENST00000269122 CASQ1P31415 396 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 C1orf141Q5JVX7 400 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 TANGO6Q9C0B7 1094 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 ISM2Q6H9L7 571 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 DDX11Q96FC9 970 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 FAM107BQ9H098 131 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 SIL1Q9H173 461 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 SERPINA10Q9UK55 444 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 FHOD3Q2V2M9 1422 aa9.42□□□□□ -0.9
CLTC-201ENST00000269122 LARP1BQ659C4 914 aaKnown RBP9.42□□□□□ -0.9
CLTC-201ENST00000269122 SEPT11Q9NVA2 429 aaKnown RBP9.42□□□□□ -0.9
CLTC-201ENST00000269122 DIAPH1O60610 1272 aaKnown RBP9.41□□□□□ -0.9
CLTC-201ENST00000269122 FERMT3Q86UX7 667 aa9.41□□□□□ -0.9
CLTC-201ENST00000269122 RBM33Q96EV2 1170 aaKnown RBP9.41□□□□□ -0.9
CLTC-201ENST00000269122 ZHX3Q9H4I2 956 aa9.41□□□□□ -0.9
CLTC-201ENST00000269122 CCP110O43303 1012 aa9.41□□□□□ -0.9
CLTC-201ENST00000269122 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
CLTC-201ENST00000269122 RABEP1Q15276 862 aa9.41□□□□□ -0.9
CLTC-201ENST00000269122 CKAP2LQ8IYA6 745 aa9.41□□□□□ -0.9
CLTC-201ENST00000269122 SPATA32Q96LK8 384 aa9.41□□□□□ -0.9
CLTC-201ENST00000269122 SURF6O75683 361 aaKnown RBP9.41□□□□□ -0.9
CLTC-201ENST00000269122 TEFQ10587 303 aa9.41□□□□□ -0.9
CLTC-201ENST00000269122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.41□□□□□ -0.9
CLTC-201ENST00000269122 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
CLTC-201ENST00000269122 CCDC43Q96MW1 224 aaKnown RBP9.41□□□□□ -0.9
CLTC-201ENST00000269122 ERLIN1O75477 346 aa9.4□□□□□ -0.9
CLTC-201ENST00000269122 NEXNQ0ZGT2 675 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms