RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 KCNA6P17658 529 aa20.52■□□□□ 0.88
MAP1LC3B-201ENST00000268607 FBLN1P23142 703 aa20.52■□□□□ 0.88
MAP1LC3B-201ENST00000268607 SETD1AO15047 1707 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3B-201ENST00000268607 CEP170BQ9Y4F5 1589 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3B-201ENST00000268607 ANKLE2Q86XL3 938 aa20.52■□□□□ 0.88
MAP1LC3B-201ENST00000268607 RGS3P49796 1198 aa20.51■□□□□ 0.87
MAP1LC3B-201ENST00000268607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.51■□□□□ 0.87
MAP1LC3B-201ENST00000268607 ABCC11Q96J66 1382 aa20.51■□□□□ 0.87
MAP1LC3B-201ENST00000268607 KDM4FA0A1W2PPD8 638 aa20.5■□□□□ 0.87
MAP1LC3B-201ENST00000268607 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
MAP1LC3B-201ENST00000268607 INSRP06213 1382 aa20.49■□□□□ 0.87
MAP1LC3B-201ENST00000268607 GOLGA2Q08379 1002 aa20.49■□□□□ 0.87
MAP1LC3B-201ENST00000268607 SPINK5Q9NQ38 1064 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3B-201ENST00000268607 WASLO00401 505 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3B-201ENST00000268607 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
MAP1LC3B-201ENST00000268607 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
MAP1LC3B-201ENST00000268607 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
MAP1LC3B-201ENST00000268607 ARHGAP23Q9P227 1491 aa20.46■□□□□ 0.87
MAP1LC3B-201ENST00000268607 SLIT1O75093 1534 aa20.45■□□□□ 0.87
MAP1LC3B-201ENST00000268607 TBX22Q9Y458 520 aa20.45■□□□□ 0.86
MAP1LC3B-201ENST00000268607 DMRT2Q9Y5R5 561 aa20.45■□□□□ 0.86
MAP1LC3B-201ENST00000268607 NUDT16Q96DE0 195 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-201ENST00000268607 ZNF521Q96K83 1311 aa20.45■□□□□ 0.86
MAP1LC3B-201ENST00000268607 SETD1BQ9UPS6 1966 aaKnown RBP20.44■□□□□ 0.86
MAP1LC3B-201ENST00000268607 PMFBP1Q8TBY8 1022 aa20.44■□□□□ 0.86
MAP1LC3B-201ENST00000268607 MTHFSP49914 203 aa20.44■□□□□ 0.86
MAP1LC3B-201ENST00000268607 ZRANB1Q9UGI0 708 aa20.44■□□□□ 0.86
MAP1LC3B-201ENST00000268607 PRR36Q9H6K5 1346 aa20.44■□□□□ 0.86
MAP1LC3B-201ENST00000268607 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3B-201ENST00000268607 HSP90AA2PQ14568 343 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3B-201ENST00000268607 CGNL1Q0VF96 1302 aa20.42■□□□□ 0.86
MAP1LC3B-201ENST00000268607 NAP1L5Q96NT1 182 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-201ENST00000268607 SLFN5Q08AF3 891 aa20.41■□□□□ 0.86
MAP1LC3B-201ENST00000268607 MED14O60244 1454 aa20.4■□□□□ 0.86
MAP1LC3B-201ENST00000268607 PLEKHG5O94827 1062 aa20.4■□□□□ 0.86
MAP1LC3B-201ENST00000268607 ANKRD36BQ8N2N9 1353 aa20.38■□□□□ 0.85
MAP1LC3B-201ENST00000268607 FYB1O15117 783 aa20.38■□□□□ 0.85
MAP1LC3B-201ENST00000268607 SOX12O15370 315 aa20.38■□□□□ 0.85
MAP1LC3B-201ENST00000268607 TERF2IPQ9NYB0 399 aa20.37■□□□□ 0.85
MAP1LC3B-201ENST00000268607 POLR3AO14802 1390 aaPredicted RBP20.37■□□□□ 0.85
MAP1LC3B-201ENST00000268607 C14orf37Q86TY3 774 aa20.37■□□□□ 0.85
MAP1LC3B-201ENST00000268607 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.37■□□□□ 0.85
MAP1LC3B-201ENST00000268607 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
MAP1LC3B-201ENST00000268607 PPIP5K1Q6PFW1 1433 aa20.36■□□□□ 0.85
MAP1LC3B-201ENST00000268607 ATAD2Q6PL18 1390 aa20.36■□□□□ 0.85
MAP1LC3B-201ENST00000268607 HDGFL2Q7Z4V5 671 aaPredicted RBP20.36■□□□□ 0.85
MAP1LC3B-201ENST00000268607 CCDC61Q9Y6R9 512 aa20.36■□□□□ 0.85
MAP1LC3B-201ENST00000268607 NME9Q86XW9 330 aa20.35■□□□□ 0.85
MAP1LC3B-201ENST00000268607 HSP90AA1P07900 732 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-201ENST00000268607 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.35■□□□□ 0.85
MAP1LC3B-201ENST00000268607 SLKQ9H2G2 1235 aaPredicted RBP20.35■□□□□ 0.85
MAP1LC3B-201ENST00000268607 RRP9O43818 475 aaKnown RBP20.34■□□□□ 0.85
MAP1LC3B-201ENST00000268607 BCAR3O75815 825 aa20.34■□□□□ 0.85
MAP1LC3B-201ENST00000268607 ARXQ96QS3 562 aa20.34■□□□□ 0.85
MAP1LC3B-201ENST00000268607 USP19O94966 1318 aa20.34■□□□□ 0.85
MAP1LC3B-201ENST00000268607 DLC1Q96QB1 1528 aa20.34■□□□□ 0.85
MAP1LC3B-201ENST00000268607 PNNQ9H307 717 aaKnown RBP20.34■□□□□ 0.85
MAP1LC3B-201ENST00000268607 WWC1Q8IX03 1113 aa20.33■□□□□ 0.85
MAP1LC3B-201ENST00000268607 TECPR2O15040 1411 aa20.33■□□□□ 0.84
MAP1LC3B-201ENST00000268607 TCP11L2Q8N4U5 519 aa20.33■□□□□ 0.84
MAP1LC3B-201ENST00000268607 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
MAP1LC3B-201ENST00000268607 SEC24BO95487 1268 aa20.32■□□□□ 0.84
MAP1LC3B-201ENST00000268607 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3B-201ENST00000268607 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
MAP1LC3B-201ENST00000268607 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.841e-6■■□□□ 13.5
MAP1LC3B-201ENST00000268607 PODXL2Q9NZ53 605 aa20.31■□□□□ 0.84
MAP1LC3B-201ENST00000268607 NUTM2GQ5VZR2 741 aa20.31■□□□□ 0.84
MAP1LC3B-201ENST00000268607 CFAP53Q96M91 514 aa20.3■□□□□ 0.84
MAP1LC3B-201ENST00000268607 PUS7Q96PZ0 661 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3B-201ENST00000268607 ACEP12821 1306 aa20.3■□□□□ 0.84
MAP1LC3B-201ENST00000268607 NPHP4O75161 1426 aaPredicted RBP20.3■□□□□ 0.84
MAP1LC3B-201ENST00000268607 E9PSI1 815 aa20.3■□□□□ 0.84
MAP1LC3B-201ENST00000268607 CPS1P31327 1500 aa20.3■□□□□ 0.84
MAP1LC3B-201ENST00000268607 RUNDC1Q96C34 613 aa20.3■□□□□ 0.84
MAP1LC3B-201ENST00000268607 L1TD1Q5T7N2 865 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3B-201ENST00000268607 IGHDP01880 384 aa20.29■□□□□ 0.84
MAP1LC3B-201ENST00000268607 SIRT1Q96EB6 747 aa20.29■□□□□ 0.84
MAP1LC3B-201ENST00000268607 U2SURPO15042 1029 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3B-201ENST00000268607 XPCQ01831 940 aaPredicted RBP20.27■□□□□ 0.84
MAP1LC3B-201ENST00000268607 BECN1Q14457 450 aa20.27■□□□□ 0.83
MAP1LC3B-201ENST00000268607 NGDNQ8NEJ9 315 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3B-201ENST00000268607 ATP7BP35670 1465 aa20.26■□□□□ 0.83
MAP1LC3B-201ENST00000268607 PROSER2Q86WR7 435 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3B-201ENST00000268607 ZNF142P52746 1687 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3B-201ENST00000268607 NKTRP30414 1462 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3B-201ENST00000268607 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3B-201ENST00000268607 CLCN1P35523 988 aa20.25■□□□□ 0.83
MAP1LC3B-201ENST00000268607 SHPRHQ149N8 1683 aa20.24■□□□□ 0.83
MAP1LC3B-201ENST00000268607 RGPD8O14715 1765 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3B-201ENST00000268607 XRCC6P12956 609 aaKnown RBP eCLIP20.23■□□□□ 0.83
MAP1LC3B-201ENST00000268607 KNDC1Q76NI1 1749 aa20.23■□□□□ 0.83
MAP1LC3B-201ENST00000268607 EMILIN1Q9Y6C2 1016 aa20.22■□□□□ 0.83
MAP1LC3B-201ENST00000268607 ESCO1Q5FWF5 840 aa20.22■□□□□ 0.83
MAP1LC3B-201ENST00000268607 ORAI2Q96SN7 254 aa20.22■□□□□ 0.83
MAP1LC3B-201ENST00000268607 PANK2Q9BZ23 570 aa20.21■□□□□ 0.83
MAP1LC3B-201ENST00000268607 ANTXR1Q9H6X2 564 aa20.21■□□□□ 0.83
MAP1LC3B-201ENST00000268607 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
MAP1LC3B-201ENST00000268607 NSD2O96028 1365 aa20.2■□□□□ 0.82
MAP1LC3B-201ENST00000268607 DDX17Q92841 729 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3B-201ENST00000268607 PTCH1Q13635 1447 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms