RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 ANKRD20A12PQ8NF67 263 aa16.09■□□□□ 0.17
CNTNAP1-201ENST00000264638 PATL2C9JE40 543 aaKnown RBP16.09■□□□□ 0.17
CNTNAP1-201ENST00000264638 PDE4CQ08493 712 aa16.09■□□□□ 0.17
CNTNAP1-201ENST00000264638 TRIM29Q14134 588 aa16.09■□□□□ 0.17
CNTNAP1-201ENST00000264638 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
CNTNAP1-201ENST00000264638 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.16
CNTNAP1-201ENST00000264638 CDK13Q14004 1512 aaKnown RBP16.08■□□□□ 0.16
CNTNAP1-201ENST00000264638 GRIN2AQ12879 1464 aa16.08■□□□□ 0.16
CNTNAP1-201ENST00000264638 CPLX1O14810 134 aa16.07■□□□□ 0.16
CNTNAP1-201ENST00000264638 NFKBIBQ15653 356 aa16.07■□□□□ 0.16
CNTNAP1-201ENST00000264638 RUFY1Q96T51 708 aa16.07■□□□□ 0.16
CNTNAP1-201ENST00000264638 ANO2Q9NQ90 1003 aa16.07■□□□□ 0.16
CNTNAP1-201ENST00000264638 R3HCC1Q9Y3T6 440 aaKnown RBP16.07■□□□□ 0.16
CNTNAP1-201ENST00000264638 CTDP1Q9Y5B0 961 aaPredicted RBP16.06■□□□□ 0.16
CNTNAP1-201ENST00000264638 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
CNTNAP1-201ENST00000264638 NEUROD6Q96NK8 337 aa16.05■□□□□ 0.16
CNTNAP1-201ENST00000264638 PRM3Q9NNZ6 103 aa16.05■□□□□ 0.16
CNTNAP1-201ENST00000264638 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
CNTNAP1-201ENST00000264638 ARHGEF11O15085 1522 aa16.05■□□□□ 0.16
CNTNAP1-201ENST00000264638 IFT57Q9NWB7 429 aa16.05■□□□□ 0.16
CNTNAP1-201ENST00000264638 ERICH2A1L162 156 aa16.05■□□□□ 0.16
CNTNAP1-201ENST00000264638 SULT6B1Q6IMI4 303 aa16.04■□□□□ 0.16
CNTNAP1-201ENST00000264638 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
CNTNAP1-201ENST00000264638 SPG7Q9UQ90 795 aa16.04■□□□□ 0.16
CNTNAP1-201ENST00000264638 TWISTNBQ3B726 338 aaPredicted RBP16.04■□□□□ 0.16
CNTNAP1-201ENST00000264638 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
CNTNAP1-201ENST00000264638 CLASRPQ8N2M8 674 aaKnown RBP16.04■□□□□ 0.16
CNTNAP1-201ENST00000264638 LNPKQ9C0E8 428 aa16.04■□□□□ 0.16
CNTNAP1-201ENST00000264638 NASPP49321 788 aaPredicted RBP16.04■□□□□ 0.16
CNTNAP1-201ENST00000264638 ERCC4Q92889 916 aaPredicted RBP16.04■□□□□ 0.16
CNTNAP1-201ENST00000264638 CT47B1P0C2W7 299 aaPredicted RBP16.03■□□□□ 0.16
CNTNAP1-201ENST00000264638 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
CNTNAP1-201ENST00000264638 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
CNTNAP1-201ENST00000264638 SASS6Q6UVJ0 657 aa16.03■□□□□ 0.16
CNTNAP1-201ENST00000264638 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
CNTNAP1-201ENST00000264638 PANK1Q8TE04 598 aa16.03■□□□□ 0.16
CNTNAP1-201ENST00000264638 TOM1L2Q6ZVM7 507 aa16.03■□□□□ 0.16
CNTNAP1-201ENST00000264638 EXOSC9Q06265 439 aaKnown RBP16.02■□□□□ 0.16
CNTNAP1-201ENST00000264638 CCDC47Q96A33 483 aaKnown RBP16.02■□□□□ 0.16
CNTNAP1-201ENST00000264638 NAIPQ13075 1403 aa16.02■□□□□ 0.16
CNTNAP1-201ENST00000264638 CCDC191Q8NCU4 936 aa16.02■□□□□ 0.16
CNTNAP1-201ENST00000264638 FBXW7Q969H0 707 aa16.02■□□□□ 0.16
CNTNAP1-201ENST00000264638 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.16
CNTNAP1-201ENST00000264638 DCTN1Q14203 1278 aa16.02■□□□□ 0.15
CNTNAP1-201ENST00000264638 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.15
CNTNAP1-201ENST00000264638 RDXP35241 583 aaKnown RBP16.02■□□□□ 0.15
CNTNAP1-201ENST00000264638 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 BICD2Q8TD16 824 aa16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 ADGRL1O94910 1474 aa16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 PLB1Q6P1J6 1458 aa16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 FOXD4L6Q3SYB3 417 aaPredicted RBP16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 FOXD4L3Q6VB84 417 aaPredicted RBP16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 WDR63Q8IWG1 891 aa16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 RALYLQ86SE5 291 aaKnown RBP16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 PRDM11Q9NQV5 511 aa16.01■□□□□ 0.15
CNTNAP1-201ENST00000264638 NINLQ9Y2I6 1382 aa16■□□□□ 0.15
CNTNAP1-201ENST00000264638 CABP4P57796 275 aa16■□□□□ 0.15
CNTNAP1-201ENST00000264638 PDE3AQ14432 1141 aa16■□□□□ 0.15
CNTNAP1-201ENST00000264638 NFXL1Q6ZNB6 911 aa16■□□□□ 0.15
CNTNAP1-201ENST00000264638 HDGFL1Q5TGJ6 251 aa16■□□□□ 0.15
CNTNAP1-201ENST00000264638 ERC1Q8IUD2 1116 aa16■□□□□ 0.15
CNTNAP1-201ENST00000264638 H0YHG0 523 aa16■□□□□ 0.15
CNTNAP1-201ENST00000264638 RAD21O60216 631 aa16■□□□□ 0.15
CNTNAP1-201ENST00000264638 DHX16O60231 1041 aaKnown RBP16■□□□□ 0.15
CNTNAP1-201ENST00000264638 CDC45O75419 566 aa15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 TCEAL9Q9UHQ7 104 aa15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 KIF14Q15058 1648 aa15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 SURF6O75683 361 aaKnown RBP15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 CAMSAP2Q08AD1 1489 aa15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 KCNH5Q8NCM2 988 aa15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 HMGB2P26583 209 aaKnown RBP15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
CNTNAP1-201ENST00000264638 TBC1D2BQ9UPU7 963 aa15.98■□□□□ 0.15
CNTNAP1-201ENST00000264638 LETM1O95202 739 aaPredicted RBP15.98■□□□□ 0.15
CNTNAP1-201ENST00000264638 MAP3K1Q13233 1512 aa15.98■□□□□ 0.15
CNTNAP1-201ENST00000264638 PCMTD1Q96MG8 357 aaPredicted RBP15.98■□□□□ 0.15
CNTNAP1-201ENST00000264638 CCDC173Q0VFZ6 552 aa15.97■□□□□ 0.15
CNTNAP1-201ENST00000264638 FCHSD2O94868 740 aa15.97■□□□□ 0.15
CNTNAP1-201ENST00000264638 GNAI2P04899 355 aa15.97■□□□□ 0.15
CNTNAP1-201ENST00000264638 CCT4P50991 539 aaKnown RBP15.97■□□□□ 0.15
CNTNAP1-201ENST00000264638 SAFBQ15424 915 aaKnown RBP eCLIP15.97■□□□□ 0.15
CNTNAP1-201ENST00000264638 SMC3Q9UQE7 1217 aa15.97■□□□□ 0.15
CNTNAP1-201ENST00000264638 HIP1O00291 1037 aa15.96■□□□□ 0.15
CNTNAP1-201ENST00000264638 CCDC73Q6ZRK6 1079 aa15.96■□□□□ 0.15
CNTNAP1-201ENST00000264638 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.15
CNTNAP1-201ENST00000264638 NAT10Q9H0A0 1025 aaKnown RBP15.96■□□□□ 0.15
CNTNAP1-201ENST00000264638 GCC1Q96CN9 775 aa15.96■□□□□ 0.15
CNTNAP1-201ENST00000264638 C22orf23Q9BZE7 217 aa15.96■□□□□ 0.15
CNTNAP1-201ENST00000264638 PCF11O94913 1555 aaKnown RBP15.96■□□□□ 0.14
CNTNAP1-201ENST00000264638 SLC4A2P04920 1241 aa15.96■□□□□ 0.14
CNTNAP1-201ENST00000264638 PSMA5P28066 241 aa15.96■□□□□ 0.14
CNTNAP1-201ENST00000264638 ZNF428Q96B54 188 aa15.96■□□□□ 0.14
CNTNAP1-201ENST00000264638 CDCA7LQ96GN5 454 aa15.96■□□□□ 0.14
CNTNAP1-201ENST00000264638 CCP110O43303 1012 aa15.95■□□□□ 0.14
CNTNAP1-201ENST00000264638 MBD3O95983 291 aa15.95■□□□□ 0.14
CNTNAP1-201ENST00000264638 FSD1Q9BTV5 496 aa15.95■□□□□ 0.14
CNTNAP1-201ENST00000264638 ABCC5O15440 1437 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms