RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 DUOX2Q9NRD8 1548 aa20.03■□□□□ 0.8
PDZRN3-201ENST00000263666 NME9Q86XW9 330 aa20.03■□□□□ 0.8
PDZRN3-201ENST00000263666 KDM5DQ9BY66 1539 aa20.02■□□□□ 0.8
PDZRN3-201ENST00000263666 SAMD9LQ8IVG5 1584 aa20.02■□□□□ 0.8
PDZRN3-201ENST00000263666 GNAI1P63096 354 aa20.02■□□□□ 0.79
PDZRN3-201ENST00000263666 PIK3C2GO75747 1445 aa20.01■□□□□ 0.79
PDZRN3-201ENST00000263666 SULT6B1Q6IMI4 303 aa20.01■□□□□ 0.79
PDZRN3-201ENST00000263666 ABCA8O94911 1581 aa20.01■□□□□ 0.79
PDZRN3-201ENST00000263666 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
PDZRN3-201ENST00000263666 UGGT1Q9NYU2 1555 aa20■□□□□ 0.79
PDZRN3-201ENST00000263666 ZNF518AQ6AHZ1 1483 aa20■□□□□ 0.79
PDZRN3-201ENST00000263666 FYB1O15117 783 aa20■□□□□ 0.79
PDZRN3-201ENST00000263666 TSPYL6Q8N831 410 aa20■□□□□ 0.79
PDZRN3-201ENST00000263666 AMPHP49418 695 aa19.99■□□□□ 0.79
PDZRN3-201ENST00000263666 THEMISQ8N1K5 641 aaPredicted RBP19.99■□□□□ 0.79
PDZRN3-201ENST00000263666 RNF214Q8ND24 703 aa19.99■□□□□ 0.79
PDZRN3-201ENST00000263666 CAVIN1Q6NZI2 390 aaKnown RBP19.98■□□□□ 0.79
PDZRN3-201ENST00000263666 MCM10Q7L590 875 aa19.98■□□□□ 0.79
PDZRN3-201ENST00000263666 STK31Q9BXU1 1019 aa19.98■□□□□ 0.79
PDZRN3-201ENST00000263666 KRT24Q2M2I5 525 aa19.98■□□□□ 0.79
PDZRN3-201ENST00000263666 RPGRIP1LQ68CZ1 1315 aa19.98■□□□□ 0.79
PDZRN3-201ENST00000263666 NCKAP5LQ9HCH0 1330 aa19.98■□□□□ 0.79
PDZRN3-201ENST00000263666 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
PDZRN3-201ENST00000263666 PRKCSHP14314 528 aaPredicted RBP19.97■□□□□ 0.79
PDZRN3-201ENST00000263666 KCNJ4P48050 445 aa19.97■□□□□ 0.79
PDZRN3-201ENST00000263666 FAM43AQ8N2R8 423 aa19.97■□□□□ 0.79
PDZRN3-201ENST00000263666 API5Q9BZZ5 524 aaKnown RBP19.97■□□□□ 0.79
PDZRN3-201ENST00000263666 EIF2S2P20042 333 aaKnown RBP19.97■□□□□ 0.79
PDZRN3-201ENST00000263666 PHACTR3Q96KR7 559 aa19.97■□□□□ 0.79
PDZRN3-201ENST00000263666 NINLQ9Y2I6 1382 aa19.96■□□□□ 0.79
PDZRN3-201ENST00000263666 ANO2Q9NQ90 1003 aa19.96■□□□□ 0.79
PDZRN3-201ENST00000263666 XRCC6P12956 609 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDZRN3-201ENST00000263666 TSHZ3Q63HK5 1081 aa19.96■□□□□ 0.79
PDZRN3-201ENST00000263666 CDC45O75419 566 aa19.96■□□□□ 0.79
PDZRN3-201ENST00000263666 SSFA2P28290 1259 aa19.96■□□□□ 0.79
PDZRN3-201ENST00000263666 LMOD3Q0VAK6 560 aa19.96■□□□□ 0.79
PDZRN3-201ENST00000263666 GRPEL1Q9HAV7 217 aa19.96■□□□□ 0.79
PDZRN3-201ENST00000263666 POLR3AO14802 1390 aaPredicted RBP19.95■□□□□ 0.78
PDZRN3-201ENST00000263666 ST18O60284 1047 aa19.95■□□□□ 0.78
PDZRN3-201ENST00000263666 AAMPQ13685 434 aa19.95■□□□□ 0.78
PDZRN3-201ENST00000263666 TNPO1Q92973 898 aaKnown RBP19.95■□□□□ 0.78
PDZRN3-201ENST00000263666 MRE11P49959 708 aa19.95■□□□□ 0.78
PDZRN3-201ENST00000263666 FKBP5Q13451 457 aaPredicted RBP19.95■□□□□ 0.78
PDZRN3-201ENST00000263666 POGZQ7Z3K3 1410 aa19.95■□□□□ 0.78
PDZRN3-201ENST00000263666 TRMT2AQ8IZ69 625 aaKnown RBP19.94■□□□□ 0.78
PDZRN3-201ENST00000263666 C16orf71Q8IYS4 520 aaPredicted RBP19.94■□□□□ 0.78
PDZRN3-201ENST00000263666 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.78
PDZRN3-201ENST00000263666 ATAD2Q6PL18 1390 aa19.93■□□□□ 0.78
PDZRN3-201ENST00000263666 F6X3S4 739 aa19.93■□□□□ 0.78
PDZRN3-201ENST00000263666 SLC4A2P04920 1241 aa19.93■□□□□ 0.78
PDZRN3-201ENST00000263666 TSPYL4Q9UJ04 414 aa19.93■□□□□ 0.78
PDZRN3-201ENST00000263666 PRPF40AO75400 957 aaKnown RBP19.93■□□□□ 0.78
PDZRN3-201ENST00000263666 TTC37Q6PGP7 1564 aa19.92■□□□□ 0.78
PDZRN3-201ENST00000263666 HMMRO75330 724 aa19.92■□□□□ 0.78
PDZRN3-201ENST00000263666 TBC1D9Q6ZT07 1266 aa19.92■□□□□ 0.78
PDZRN3-201ENST00000263666 NFE2L2Q16236 605 aa19.92■□□□□ 0.78
PDZRN3-201ENST00000263666 K7ELQ4 463 aaPredicted RBP19.91■□□□□ 0.78
PDZRN3-201ENST00000263666 FCHSD2O94868 740 aa19.91■□□□□ 0.78
PDZRN3-201ENST00000263666 MCCP23508 829 aa19.91■□□□□ 0.78
PDZRN3-201ENST00000263666 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
PDZRN3-201ENST00000263666 EXOC6BQ9Y2D4 811 aa19.91■□□□□ 0.78
PDZRN3-201ENST00000263666 EIF2AK4Q9P2K8 1649 aaKnown RBP19.9■□□□□ 0.78
PDZRN3-201ENST00000263666 MAP4K4O95819 1239 aaPredicted RBP19.9■□□□□ 0.78
PDZRN3-201ENST00000263666 CSB-PGBD3P0DP91 1061 aa19.9■□□□□ 0.78
PDZRN3-201ENST00000263666 NEK4P51957 841 aa19.9■□□□□ 0.78
PDZRN3-201ENST00000263666 HSP90AA2PQ14568 343 aaPredicted RBP19.9■□□□□ 0.78
PDZRN3-201ENST00000263666 CHMP3Q9Y3E7 222 aa19.9■□□□□ 0.78
PDZRN3-201ENST00000263666 CCDC9Q9Y3X0 531 aaKnown RBP19.9■□□□□ 0.78
PDZRN3-201ENST00000263666 NASPP49321 788 aaPredicted RBP19.9■□□□□ 0.78
PDZRN3-201ENST00000263666 VSIG10Q8N0Z9 540 aa19.89■□□□□ 0.78
PDZRN3-201ENST00000263666 C8orf58Q8NAV2 365 aa19.89■□□□□ 0.78
PDZRN3-201ENST00000263666 MBIPQ9NS73 344 aa19.89■□□□□ 0.78
PDZRN3-201ENST00000263666 ATP10AO60312 1499 aa19.89■□□□□ 0.78
PDZRN3-201ENST00000263666 USP19O94966 1318 aa19.89■□□□□ 0.77
PDZRN3-201ENST00000263666 RRAGDQ9NQL2 400 aaPredicted RBP19.89■□□□□ 0.77
PDZRN3-201ENST00000263666 MAST1Q9Y2H9 1570 aa19.89■□□□□ 0.77
PDZRN3-201ENST00000263666 NAP1L2Q9ULW6 460 aaPredicted RBP19.89■□□□□ 0.77
PDZRN3-201ENST00000263666 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.88■□□□□ 0.77
PDZRN3-201ENST00000263666 INTS3Q68E01 1043 aaKnown RBP19.88■□□□□ 0.77
PDZRN3-201ENST00000263666 GCC1Q96CN9 775 aa19.88■□□□□ 0.77
PDZRN3-201ENST00000263666 A0A1W2PP64 1363 aa19.88■□□□□ 0.77
PDZRN3-201ENST00000263666 AEBP1Q8IUX7 1158 aa19.87■□□□□ 0.77
PDZRN3-201ENST00000263666 PTPRTO14522 1441 aa19.86■□□□□ 0.77
PDZRN3-201ENST00000263666 PSME1Q06323 249 aa19.86■□□□□ 0.77
PDZRN3-201ENST00000263666 ZBTB40Q9NUA8 1239 aa19.86■□□□□ 0.77
PDZRN3-201ENST00000263666 RTEL1-TNFRSF6BF6WH68 1400 aa19.86■□□□□ 0.77
PDZRN3-201ENST00000263666 TRPM1Q7Z4N2 1603 aa19.86■□□□□ 0.77
PDZRN3-201ENST00000263666 PRDM15P57071 1507 aaPredicted RBP19.85■□□□□ 0.77
PDZRN3-201ENST00000263666 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
PDZRN3-201ENST00000263666 CT47B1P0C2W7 299 aaPredicted RBP19.85■□□□□ 0.77
PDZRN3-201ENST00000263666 UHRF1BP1LA0JNW5 1464 aa19.85■□□□□ 0.77
PDZRN3-201ENST00000263666 ANKLE2Q86XL3 938 aa19.85■□□□□ 0.77
PDZRN3-201ENST00000263666 LARP6Q9BRS8 491 aaKnown RBP19.85■□□□□ 0.77
PDZRN3-201ENST00000263666 IL1RAPL2Q9NP60 686 aa19.85■□□□□ 0.77
PDZRN3-201ENST00000263666 ARHGEF5Q12774 1597 aa19.85■□□□□ 0.77
PDZRN3-201ENST00000263666 SKOR2Q2VWA4 1001 aaPredicted RBP19.84■□□□□ 0.77
PDZRN3-201ENST00000263666 NUCB1Q02818 461 aa19.84■□□□□ 0.77
PDZRN3-201ENST00000263666 KIAA1211Q6ZU35 1233 aa19.84■□□□□ 0.77
PDZRN3-201ENST00000263666 OTUD7AQ8TE49 926 aaPredicted RBP19.84■□□□□ 0.77
PDZRN3-201ENST00000263666 POLKQ9UBT6 870 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms