RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 ITSN1Q15811 1721 aa26.02■■□□□ 1.76
COPE-201ENST00000262812 RBM6P78332 1123 aaKnown RBP26.01■■□□□ 1.75
COPE-201ENST00000262812 ABTB2Q8N961 1025 aa26.01■■□□□ 1.75
COPE-201ENST00000262812 TRPM3Q9HCF6 1732 aaPredicted RBP26■■□□□ 1.75
COPE-201ENST00000262812 FAM83GA6ND36 823 aa26■■□□□ 1.75
COPE-201ENST00000262812 TOPAZ1Q8N9V7 1692 aa25.99■■□□□ 1.75
COPE-201ENST00000262812 UNC5CLQ8IV45 518 aa25.97■■□□□ 1.75
COPE-201ENST00000262812 TMC1Q8TDI8 760 aa25.97■■□□□ 1.75
COPE-201ENST00000262812 BCL9LQ86UU0 1499 aa25.97■■□□□ 1.75
COPE-201ENST00000262812 SBNO2Q9Y2G9 1366 aa25.96■■□□□ 1.75
COPE-201ENST00000262812 ATAD2Q6PL18 1390 aa25.95■■□□□ 1.75
COPE-201ENST00000262812 ALS2Q96Q42 1657 aa25.94■■□□□ 1.74
COPE-201ENST00000262812 TESK2Q96S53 571 aa25.94■■□□□ 1.74
COPE-201ENST00000262812 ZC3H6P61129 1189 aaKnown RBP25.93■■□□□ 1.74
COPE-201ENST00000262812 ZNF692Q9BU19 519 aaPredicted RBP25.93■■□□□ 1.74
COPE-201ENST00000262812 ATRNO75882 1429 aa25.92■■□□□ 1.74
COPE-201ENST00000262812 USP6P35125 1406 aa25.91■■□□□ 1.74
COPE-201ENST00000262812 NLRP13Q86W25 1043 aa25.91■■□□□ 1.74
COPE-201ENST00000262812 GJD4Q96KN9 370 aaPredicted RBP25.91■■□□□ 1.74
COPE-201ENST00000262812 SLC12A5Q9H2X9 1139 aa25.91■■□□□ 1.74
COPE-201ENST00000262812 USP47Q96K76 1375 aa25.91■■□□□ 1.74
COPE-201ENST00000262812 SLIT2O94813 1529 aa25.9■■□□□ 1.74
COPE-201ENST00000262812 NLRP6P59044 892 aa25.9■■□□□ 1.74
COPE-201ENST00000262812 PRDM11Q9NQV5 511 aa25.9■■□□□ 1.74
COPE-201ENST00000262812 BTG4Q9NY30 223 aa25.9■■□□□ 1.74
COPE-201ENST00000262812 CCDC9Q9Y3X0 531 aaKnown RBP25.9■■□□□ 1.74
COPE-201ENST00000262812 CHRNA2Q15822 529 aa25.89■■□□□ 1.74
COPE-201ENST00000262812 MARF1Q9Y4F3 1742 aaKnown RBP25.88■■□□□ 1.73
COPE-201ENST00000262812 BRD4O60885 1362 aaPredicted RBP25.87■■□□□ 1.73
COPE-201ENST00000262812 KTN1Q86UP2 1357 aaKnown RBP25.87■■□□□ 1.73
COPE-201ENST00000262812 KIAA0232Q92628 1395 aa25.87■■□□□ 1.73
COPE-201ENST00000262812 SLC24A1O60721 1099 aa25.87■■□□□ 1.73
COPE-201ENST00000262812 TTC21BQ7Z4L5 1316 aa25.87■■□□□ 1.73
COPE-201ENST00000262812 RGS12O14924 1447 aa25.86■■□□□ 1.73
COPE-201ENST00000262812 GCP02774 474 aa25.85■■□□□ 1.73
COPE-201ENST00000262812 VPS72Q15906 364 aa25.85■■□□□ 1.73
COPE-201ENST00000262812 PUS7Q96PZ0 661 aaKnown RBP25.85■■□□□ 1.73
COPE-201ENST00000262812 ABCA3Q99758 1704 aa25.85■■□□□ 1.73
COPE-201ENST00000262812 CDK12Q9NYV4 1490 aaPredicted RBP25.85■■□□□ 1.73
COPE-201ENST00000262812 ZBTB7CA1YPR0 619 aa25.84■■□□□ 1.73
COPE-201ENST00000262812 TMF1P82094 1093 aa25.84■■□□□ 1.73
COPE-201ENST00000262812 HDGFL2Q7Z4V5 671 aaPredicted RBP25.84■■□□□ 1.73
COPE-201ENST00000262812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.84■■□□□ 1.73
COPE-201ENST00000262812 CPSF1Q10570 1443 aaKnown RBP25.83■■□□□ 1.73
COPE-201ENST00000262812 SSH2Q76I76 1423 aa25.83■■□□□ 1.73
COPE-201ENST00000262812 USP19O94966 1318 aa25.83■■□□□ 1.73
COPE-201ENST00000262812 TERF2IPQ9NYB0 399 aa25.81■■□□□ 1.72
COPE-201ENST00000262812 SOX12O15370 315 aa25.8■■□□□ 1.72
COPE-201ENST00000262812 STRN4Q9NRL3 753 aa25.8■■□□□ 1.72
COPE-201ENST00000262812 ZRANB1Q9UGI0 708 aa25.79■■□□□ 1.72
COPE-201ENST00000262812 TTC21AQ8NDW8 1320 aa25.79■■□□□ 1.72
COPE-201ENST00000262812 EVA1CP58658 441 aa25.78■■□□□ 1.72
COPE-201ENST00000262812 CD163L1Q9NR16 1453 aa25.77■■□□□ 1.72
COPE-201ENST00000262812 NME9Q86XW9 330 aa25.76■■□□□ 1.71
COPE-201ENST00000262812 UPF1Q92900 1129 aaKnown RBP eCLIP25.76■■□□□ 1.71
COPE-201ENST00000262812 PLCH1Q4KWH8 1693 aa25.76■■□□□ 1.71
COPE-201ENST00000262812 CRYBG1Q9Y4K1 1723 aa25.76■■□□□ 1.71
COPE-201ENST00000262812 COL14A1Q05707 1796 aaKnown RBP25.75■■□□□ 1.71
COPE-201ENST00000262812 PHRF1Q9P1Y6 1649 aaKnown RBP25.74■■□□□ 1.71
COPE-201ENST00000262812 A0A0G2JS52 829 aa25.74■■□□□ 1.71
COPE-201ENST00000262812 MYT1Q01538 1121 aa25.74■■□□□ 1.71
COPE-201ENST00000262812 SEPT12Q8IYM1 358 aa25.74■■□□□ 1.71
COPE-201ENST00000262812 A0A1W2PP64 1363 aa25.73■■□□□ 1.71
COPE-201ENST00000262812 CPDO75976 1380 aa25.73■■□□□ 1.71
COPE-201ENST00000262812 FAM98CQ17RN3 349 aaKnown RBP25.73■■□□□ 1.71
COPE-201ENST00000262812 CDCA8Q53HL2 280 aa25.73■■□□□ 1.71
COPE-201ENST00000262812 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.72■■□□□ 1.71
COPE-201ENST00000262812 EIF4G2P78344 907 aaKnown RBP eCLIP25.72■■□□□ 1.71
COPE-201ENST00000262812 GLI3P10071 1580 aa25.72■■□□□ 1.71
COPE-201ENST00000262812 NWD2Q9ULI1 1742 aa25.71■■□□□ 1.71
COPE-201ENST00000262812 SPATA31A5Q5VU36 1347 aa25.71■■□□□ 1.71
COPE-201ENST00000262812 SPATA31A7Q8IWB4 1347 aa25.71■■□□□ 1.71
COPE-201ENST00000262812 NRKQ7Z2Y5 1582 aa25.71■■□□□ 1.71
COPE-201ENST00000262812 HSPA5P11021 654 aaKnown RBP25.71■■□□□ 1.71
COPE-201ENST00000262812 KCNH5Q8NCM2 988 aa25.71■■□□□ 1.71
COPE-201ENST00000262812 AKAP12Q02952 1782 aa25.7■■□□□ 1.7
COPE-201ENST00000262812 ONECUT3O60422 494 aaPredicted RBP25.7■■□□□ 1.7
COPE-201ENST00000262812 POLR3GLQ9BT43 218 aa25.7■■□□□ 1.7
COPE-201ENST00000262812 USP35Q9P2H5 1018 aa25.7■■□□□ 1.7
COPE-201ENST00000262812 PIK3C2AO00443 1686 aa25.7■■□□□ 1.7
COPE-201ENST00000262812 NINLQ9Y2I6 1382 aa25.69■■□□□ 1.7
COPE-201ENST00000262812 LARP1Q6PKG0 1096 aaKnown RBP25.68■■□□□ 1.7
COPE-201ENST00000262812 EDC4Q6P2E9 1401 aaKnown RBP25.68■■□□□ 1.7
COPE-201ENST00000262812 ARHGEF25Q86VW2 580 aa25.66■■□□□ 1.7
COPE-201ENST00000262812 SLIT3O75094 1523 aa25.66■■□□□ 1.7
COPE-201ENST00000262812 SPATA31A1Q5TZJ5 1347 aa25.65■■□□□ 1.7
COPE-201ENST00000262812 CAMTA1Q9Y6Y1 1673 aa25.65■■□□□ 1.7
COPE-201ENST00000262812 AXIN2Q9Y2T1 843 aa25.65■■□□□ 1.7
COPE-201ENST00000262812 USP31Q70CQ4 1352 aa25.65■■□□□ 1.7
COPE-201ENST00000262812 NRAPQ86VF7 1730 aa25.65■■□□□ 1.7
COPE-201ENST00000262812 AATKQ6ZMQ8 1374 aa25.64■■□□□ 1.69
COPE-201ENST00000262812 MON2Q7Z3U7 1717 aa25.63■■□□□ 1.69
COPE-201ENST00000262812 ANKRD36BQ8N2N9 1353 aa25.63■■□□□ 1.69
COPE-201ENST00000262812 KRT27Q7Z3Y8 459 aa25.62■■□□□ 1.69
COPE-201ENST00000262812 COG3Q96JB2 828 aa25.59■■□□□ 1.69
COPE-201ENST00000262812 TOM1L2Q6ZVM7 507 aa25.58■■□□□ 1.69
COPE-201ENST00000262812 TCP11L2Q8N4U5 519 aa25.58■■□□□ 1.69
COPE-201ENST00000262812 CSB-PGBD3P0DP91 1061 aa25.57■■□□□ 1.68
COPE-201ENST00000262812 CARD14Q9BXL6 1004 aa25.57■■□□□ 1.68
COPE-201ENST00000262812 GGNBP2Q9H3C7 697 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms