RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 SPDYE4A6NLX3 237 aa29.41■■■□□ 2.3
CCM2L-201ENST00000262659 NUCB1Q02818 461 aa29.41■■■□□ 2.3
CCM2L-201ENST00000262659 WDR63Q8IWG1 891 aa29.41■■■□□ 2.3
CCM2L-201ENST00000262659 GTF2F1P35269 517 aaKnown RBP eCLIP29.4■■■□□ 2.3
CCM2L-201ENST00000262659 PHF23Q9BUL5 403 aaPredicted RBP29.4■■■□□ 2.3
CCM2L-201ENST00000262659 TMEM63CQ9P1W3 806 aa29.4■■■□□ 2.3
CCM2L-201ENST00000262659 RNF17Q9BXT8 1623 aaKnown RBP29.39■■■□□ 2.3
CCM2L-201ENST00000262659 CYP2E1P05181 493 aaPredicted RBP29.39■■■□□ 2.3
CCM2L-201ENST00000262659 MYOM1P52179 1685 aa29.39■■■□□ 2.3
CCM2L-201ENST00000262659 NUCB2P80303 420 aa29.39■■■□□ 2.3
CCM2L-201ENST00000262659 RUNDC1Q96C34 613 aa29.39■■■□□ 2.3
CCM2L-201ENST00000262659 IGSF3O75054 1194 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 PLB1Q6P1J6 1458 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 MRC2Q9UBG0 1479 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 TRIM27P14373 513 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 BMP2KLQ5H9B9 411 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 HMGN5P82970 282 aaKnown RBP29.37■■■□□ 2.29
CCM2L-201ENST00000262659 DDX19BQ9UMR2 479 aa29.37■■■□□ 2.29
CCM2L-201ENST00000262659 TBC1D9Q6ZT07 1266 aa29.36■■■□□ 2.29
CCM2L-201ENST00000262659 SYNJ2O15056 1496 aa29.35■■■□□ 2.29
CCM2L-201ENST00000262659 NSFL1CQ9UNZ2 370 aaKnown RBP29.35■■■□□ 2.29
CCM2L-201ENST00000262659 CHD1LQ86WJ1 897 aa29.35■■■□□ 2.29
CCM2L-201ENST00000262659 POLR3AO14802 1390 aaPredicted RBP29.34■■■□□ 2.29
CCM2L-201ENST00000262659 MPNDQ8N594 471 aa29.34■■■□□ 2.29
CCM2L-201ENST00000262659 KIF3AQ9Y496 699 aa29.34■■■□□ 2.29
CCM2L-201ENST00000262659 VGLL3A8MV65 326 aa29.34■■■□□ 2.29
CCM2L-201ENST00000262659 CHAMP1Q96JM3 812 aa29.33■■■□□ 2.29
CCM2L-201ENST00000262659 IQSEC2Q5JU85 1478 aa29.32■■■□□ 2.28
CCM2L-201ENST00000262659 HNRNPMP52272 730 aaKnown RBP eCLIP29.32■■■□□ 2.28
CCM2L-201ENST00000262659 BCL2L12Q9HB09 334 aa29.32■■■□□ 2.28
CCM2L-201ENST00000262659 SMC4Q9NTJ3 1288 aa29.32■■■□□ 2.28
CCM2L-201ENST00000262659 IPO4Q8TEX9 1081 aaKnown RBP29.32■■■□□ 2.28
CCM2L-201ENST00000262659 ZNF830Q96NB3 372 aaPredicted RBP29.32■■■□□ 2.28
CCM2L-201ENST00000262659 CARD14Q9BXL6 1004 aa29.32■■■□□ 2.28
CCM2L-201ENST00000262659 NOLC1Q14978 699 aaKnown RBP eCLIP29.31■■■□□ 2.28
CCM2L-201ENST00000262659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.31■■■□□ 2.28
CCM2L-201ENST00000262659 ZBTB22O15209 634 aa29.3■■■□□ 2.28
CCM2L-201ENST00000262659 PIBF1Q8WXW3 757 aa29.3■■■□□ 2.28
CCM2L-201ENST00000262659 CGNQ9P2M7 1197 aaKnown RBP29.3■■■□□ 2.28
CCM2L-201ENST00000262659 KANK1Q14678 1352 aa29.3■■■□□ 2.28
CCM2L-201ENST00000262659 IQGAP1P46940 1657 aa29.3■■■□□ 2.28
CCM2L-201ENST00000262659 IFT140Q96RY7 1462 aa29.29■■■□□ 2.28
CCM2L-201ENST00000262659 C17orf53Q8N3J3 647 aaPredicted RBP29.29■■■□□ 2.28
CCM2L-201ENST00000262659 PDCL2Q8N4E4 241 aa29.29■■■□□ 2.28
CCM2L-201ENST00000262659 ZBTB40Q9NUA8 1239 aa29.29■■■□□ 2.28
CCM2L-201ENST00000262659 TAF3Q5VWG9 929 aa29.27■■■□□ 2.28
CCM2L-201ENST00000262659 TMEM57Q8N5G2 664 aa29.27■■■□□ 2.28
CCM2L-201ENST00000262659 U2AF2P26368 475 aaKnown RBP eCLIP29.26■■■□□ 2.27
CCM2L-201ENST00000262659 ATF7IPQ6VMQ6 1270 aa29.26■■■□□ 2.27
CCM2L-201ENST00000262659 TSR2Q969E8 191 aaKnown RBP29.26■■■□□ 2.27
CCM2L-201ENST00000262659 ZDHHC9Q9Y397 364 aa29.26■■■□□ 2.27
CCM2L-201ENST00000262659 SHPRHQ149N8 1683 aa29.25■■■□□ 2.27
CCM2L-201ENST00000262659 CFAP74Q9C0B2 1584 aa29.25■■■□□ 2.27
CCM2L-201ENST00000262659 SSH1Q8WYL5 1049 aa29.24■■■□□ 2.27
CCM2L-201ENST00000262659 CCDC27Q2M243 656 aa29.24■■■□□ 2.27
CCM2L-201ENST00000262659 ZGPATQ8N5A5 531 aaKnown RBP29.23■■■□□ 2.27
CCM2L-201ENST00000262659 NOB1Q9ULX3 412 aaKnown RBP29.23■■■□□ 2.27
CCM2L-201ENST00000262659 RABEP1Q15276 862 aa29.22■■■□□ 2.27
CCM2L-201ENST00000262659 ANKRD45Q5TZF3 282 aa29.22■■■□□ 2.27
CCM2L-201ENST00000262659 SCAF11Q99590 1463 aaKnown RBP29.21■■■□□ 2.27
CCM2L-201ENST00000262659 ZNF771Q7L3S4 317 aaPredicted RBP29.21■■■□□ 2.27
CCM2L-201ENST00000262659 TSPY26PQ9H489 355 aa29.21■■■□□ 2.27
CCM2L-201ENST00000262659 TTC12Q9H892 705 aaPredicted RBP29.21■■■□□ 2.27
CCM2L-201ENST00000262659 EXOSC9Q06265 439 aaKnown RBP29.2■■■□□ 2.26
CCM2L-201ENST00000262659 FKBP5Q13451 457 aaPredicted RBP29.2■■■□□ 2.26
CCM2L-201ENST00000262659 CWC22Q9HCG8 908 aaKnown RBP29.19■■■□□ 2.26
CCM2L-201ENST00000262659 KDM5AP29375 1690 aaKnown RBP29.17■■■□□ 2.26
CCM2L-201ENST00000262659 CEP152O94986 1710 aa29.17■■■□□ 2.26
CCM2L-201ENST00000262659 FOXD4L5Q5VV16 416 aaPredicted RBP29.17■■■□□ 2.26
CCM2L-201ENST00000262659 PLCD3Q8N3E9 789 aa29.17■■■□□ 2.26
CCM2L-201ENST00000262659 FOXD4L4Q8WXT5 416 aaPredicted RBP29.17■■■□□ 2.26
CCM2L-201ENST00000262659 SPTLC3Q9NUV7 552 aa29.16■■■□□ 2.26
CCM2L-201ENST00000262659 ANKRD7Q92527 254 aa29.16■■■□□ 2.26
CCM2L-201ENST00000262659 CT47B1P0C2W7 299 aaPredicted RBP29.15■■■□□ 2.26
CCM2L-201ENST00000262659 MADDQ8WXG6 1647 aa29.15■■■□□ 2.26
CCM2L-201ENST00000262659 CDC45O75419 566 aa29.15■■■□□ 2.26
CCM2L-201ENST00000262659 PLEKHD1A6NEE1 506 aa29.14■■■□□ 2.26
CCM2L-201ENST00000262659 MBD3O95983 291 aa29.14■■■□□ 2.26
CCM2L-201ENST00000262659 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
CCM2L-201ENST00000262659 MORC1Q86VD1 984 aa29.12■■■□□ 2.25
CCM2L-201ENST00000262659 RIOK3O14730 519 aaKnown RBP29.12■■■□□ 2.25
CCM2L-201ENST00000262659 USP25Q9UHP3 1055 aa29.11■■■□□ 2.25
CCM2L-201ENST00000262659 CDK11BP21127 795 aaKnown RBP29.11■■■□□ 2.25
CCM2L-201ENST00000262659 FEZ1Q99689 392 aa29.09■■■□□ 2.25
CCM2L-201ENST00000262659 FBLN2P98095 1184 aa29.09■■■□□ 2.25
CCM2L-201ENST00000262659 ARHGEF5Q12774 1597 aa29.08■■■□□ 2.25
CCM2L-201ENST00000262659 JPH4Q96JJ6 628 aa29.08■■■□□ 2.25
CCM2L-201ENST00000262659 UNC13BO14795 1591 aa29.08■■■□□ 2.25
CCM2L-201ENST00000262659 IRX5P78411 483 aaPredicted RBP29.08■■■□□ 2.24
CCM2L-201ENST00000262659 OGFRQ9NZT2 677 aa29.07■■■□□ 2.24
CCM2L-201ENST00000262659 MAGI1Q96QZ7 1491 aaPredicted RBP29.07■■■□□ 2.24
CCM2L-201ENST00000262659 PPIP5K1Q6PFW1 1433 aa29.07■■■□□ 2.24
CCM2L-201ENST00000262659 GCC1Q96CN9 775 aa29.07■■■□□ 2.24
CCM2L-201ENST00000262659 ADCY5O95622 1261 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 USP26Q9BXU7 913 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 NOS1P29475 1434 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 ATP10AO60312 1499 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 CARMIL2Q6F5E8 1435 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 GSPT1P15170 499 aaKnown RBP29.05■■■□□ 2.24
CCM2L-201ENST00000262659 C1orf115Q9H7X2 142 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms