RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
SFSWAP-201ENST00000261674 USP19O94966 1318 aa18.43■□□□□ 0.54
SFSWAP-201ENST00000261674 AMOTL2Q9Y2J4 779 aa18.43■□□□□ 0.54
SFSWAP-201ENST00000261674 RIMS1Q86UR5 1692 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-201ENST00000261674 GGNBP2Q9H3C7 697 aa18.42■□□□□ 0.54
SFSWAP-201ENST00000261674 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
SFSWAP-201ENST00000261674 TMEM131LA2VDJ0 1609 aa18.42■□□□□ 0.54
SFSWAP-201ENST00000261674 SOX12O15370 315 aa18.42■□□□□ 0.54
SFSWAP-201ENST00000261674 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
SFSWAP-201ENST00000261674 SMC4Q9NTJ3 1288 aa18.42■□□□□ 0.54
SFSWAP-201ENST00000261674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
SFSWAP-201ENST00000261674 CDK19Q9BWU1 502 aa18.42■□□□□ 0.54
SFSWAP-201ENST00000261674 FBLN1P23142 703 aa18.41■□□□□ 0.54
SFSWAP-201ENST00000261674 MFAP1P55081 439 aaKnown RBP18.41■□□□□ 0.54
SFSWAP-201ENST00000261674 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
SFSWAP-201ENST00000261674 ANKLE2Q86XL3 938 aa18.4■□□□□ 0.54
SFSWAP-201ENST00000261674 ITPRIPQ8IWB1 547 aa18.4■□□□□ 0.54
SFSWAP-201ENST00000261674 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
SFSWAP-201ENST00000261674 MYH16Q9H6N6 1097 aa18.4■□□□□ 0.54
SFSWAP-201ENST00000261674 ZC3H13Q5T200 1668 aaKnown RBP18.4■□□□□ 0.54
SFSWAP-201ENST00000261674 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
SFSWAP-201ENST00000261674 POLR3AO14802 1390 aaPredicted RBP18.39■□□□□ 0.53
SFSWAP-201ENST00000261674 FER1L4A9Z1Z3 1794 aa18.39■□□□□ 0.53
SFSWAP-201ENST00000261674 SPATA31D1Q6ZQQ2 1576 aa18.39■□□□□ 0.53
SFSWAP-201ENST00000261674 KCNA6P17658 529 aa18.39■□□□□ 0.53
SFSWAP-201ENST00000261674 IQGAP1P46940 1657 aa18.38■□□□□ 0.53
SFSWAP-201ENST00000261674 EXOSC9Q06265 439 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-201ENST00000261674 YTHDC2Q9H6S0 1430 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-201ENST00000261674 MYOM2P54296 1465 aa18.38■□□□□ 0.53
SFSWAP-201ENST00000261674 ZKSCAN2Q63HK3 967 aa18.37■□□□□ 0.53
SFSWAP-201ENST00000261674 DZIP1LQ8IYY4 767 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-201ENST00000261674 WDR63Q8IWG1 891 aa18.37■□□□□ 0.53
SFSWAP-201ENST00000261674 C3P01024 1663 aa18.36■□□□□ 0.53
SFSWAP-201ENST00000261674 KDM5AP29375 1690 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-201ENST00000261674 EVC2Q86UK5 1308 aa18.36■□□□□ 0.53
SFSWAP-201ENST00000261674 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
SFSWAP-201ENST00000261674 MVPQ14764 893 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-201ENST00000261674 PPLO60437 1756 aa18.34■□□□□ 0.53
SFSWAP-201ENST00000261674 PTPRMP28827 1452 aa18.32■□□□□ 0.52
SFSWAP-201ENST00000261674 SSH1Q8WYL5 1049 aa18.32■□□□□ 0.52
SFSWAP-201ENST00000261674 ZFYVE9O95405 1425 aa18.32■□□□□ 0.52
SFSWAP-201ENST00000261674 ROBO2Q9HCK4 1378 aa18.32■□□□□ 0.52
SFSWAP-201ENST00000261674 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
SFSWAP-201ENST00000261674 NUTM2GQ5VZR2 741 aa18.31■□□□□ 0.52
SFSWAP-201ENST00000261674 TBC1D32Q96NH3 1257 aa18.31■□□□□ 0.52
SFSWAP-201ENST00000261674 MYOM1P52179 1685 aa18.31■□□□□ 0.52
SFSWAP-201ENST00000261674 RIPK4P57078 832 aa18.3■□□□□ 0.52
SFSWAP-201ENST00000261674 NOB1Q9ULX3 412 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-201ENST00000261674 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
SFSWAP-201ENST00000261674 TRIM27P14373 513 aa18.3■□□□□ 0.52
SFSWAP-201ENST00000261674 NRXN1Q9ULB1 1477 aa18.3■□□□□ 0.52
SFSWAP-201ENST00000261674 XPCQ01831 940 aaPredicted RBP18.3■□□□□ 0.52
SFSWAP-201ENST00000261674 ZRANB1Q9UGI0 708 aa18.3■□□□□ 0.52
SFSWAP-201ENST00000261674 C22orf23Q9BZE7 217 aa18.29■□□□□ 0.52
SFSWAP-201ENST00000261674 ADGRB1O14514 1584 aa18.29■□□□□ 0.52
SFSWAP-201ENST00000261674 NINLQ9Y2I6 1382 aa18.29■□□□□ 0.52
SFSWAP-201ENST00000261674 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-201ENST00000261674 LNPKQ9C0E8 428 aa18.28■□□□□ 0.52
SFSWAP-201ENST00000261674 TMEM57Q8N5G2 664 aa18.27■□□□□ 0.51
SFSWAP-201ENST00000261674 NUDT16Q96DE0 195 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-201ENST00000261674 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
SFSWAP-201ENST00000261674 ADAMTS13Q76LX8 1427 aa18.25■□□□□ 0.51
SFSWAP-201ENST00000261674 NLRP1Q9C000 1473 aa18.25■□□□□ 0.51
SFSWAP-201ENST00000261674 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-201ENST00000261674 ATF7IPQ6VMQ6 1270 aa18.25■□□□□ 0.51
SFSWAP-201ENST00000261674 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-201ENST00000261674 FOXD4L1Q9NU39 408 aa18.25■□□□□ 0.51
SFSWAP-201ENST00000261674 PTPRUQ92729 1446 aa18.24■□□□□ 0.51
SFSWAP-201ENST00000261674 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
SFSWAP-201ENST00000261674 ZBTB7CA1YPR0 619 aa18.24■□□□□ 0.51
SFSWAP-201ENST00000261674 THUMPD2Q9BTF0 503 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-201ENST00000261674 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
SFSWAP-201ENST00000261674 PROSER2Q86WR7 435 aaPredicted RBP18.23■□□□□ 0.51
SFSWAP-201ENST00000261674 C1orf115Q9H7X2 142 aa18.23■□□□□ 0.51
SFSWAP-201ENST00000261674 CCDC27Q2M243 656 aa18.23■□□□□ 0.51
SFSWAP-201ENST00000261674 HMOX1P09601 288 aa18.23■□□□□ 0.51
SFSWAP-201ENST00000261674 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
SFSWAP-201ENST00000261674 ANTXR1Q9H6X2 564 aa18.22■□□□□ 0.51
SFSWAP-201ENST00000261674 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
SFSWAP-201ENST00000261674 UBR1Q8IWV7 1749 aa18.22■□□□□ 0.51
SFSWAP-201ENST00000261674 SBNO2Q9Y2G9 1366 aa18.22■□□□□ 0.51
SFSWAP-201ENST00000261674 HSP90AA1P07900 732 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-201ENST00000261674 AAMPQ13685 434 aa18.21■□□□□ 0.51
SFSWAP-201ENST00000261674 PLEKHG1Q9ULL1 1385 aa18.21■□□□□ 0.51
SFSWAP-201ENST00000261674 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-201ENST00000261674 FYB1O15117 783 aa18.21■□□□□ 0.51
SFSWAP-201ENST00000261674 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
SFSWAP-201ENST00000261674 NGDNQ8NEJ9 315 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-201ENST00000261674 DDX17Q92841 729 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-201ENST00000261674 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
SFSWAP-201ENST00000261674 NME9Q86XW9 330 aa18.2■□□□□ 0.5
SFSWAP-201ENST00000261674 PRR36Q9H6K5 1346 aa18.2■□□□□ 0.5
SFSWAP-201ENST00000261674 ANKRD45Q5TZF3 282 aa18.19■□□□□ 0.5
SFSWAP-201ENST00000261674 MCM4P33991 863 aa18.19■□□□□ 0.5
SFSWAP-201ENST00000261674 CEP170BQ9Y4F5 1589 aaPredicted RBP18.18■□□□□ 0.5
SFSWAP-201ENST00000261674 ANKRD36BQ8N2N9 1353 aa18.18■□□□□ 0.5
SFSWAP-201ENST00000261674 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
SFSWAP-201ENST00000261674 ABCC11Q96J66 1382 aa18.18■□□□□ 0.5
SFSWAP-201ENST00000261674 IPO8O15397 1037 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-201ENST00000261674 A0A1W2PP64 1363 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms