RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 MYOM2P54296 1465 aa20.2■□□□□ 0.82
SNCAIP-202ENST00000261368 HDAC1Q13547 482 aaPredicted RBP20.2■□□□□ 0.82
SNCAIP-202ENST00000261368 GBP4Q96PP9 640 aa20.2■□□□□ 0.82
SNCAIP-202ENST00000261368 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
SNCAIP-202ENST00000261368 NPATQ14207 1427 aa20.2■□□□□ 0.82
SNCAIP-202ENST00000261368 ZNF518AQ6AHZ1 1483 aa20.2■□□□□ 0.82
SNCAIP-202ENST00000261368 NUTM2FA1L443 756 aa20.19■□□□□ 0.82
SNCAIP-202ENST00000261368 DDX11L8A8MPP1 907 aa20.19■□□□□ 0.82
SNCAIP-202ENST00000261368 RSPH6AQ9H0K4 717 aa20.19■□□□□ 0.82
SNCAIP-202ENST00000261368 WAPLQ7Z5K2 1190 aa20.18■□□□□ 0.82
SNCAIP-202ENST00000261368 RRAGDQ9NQL2 400 aaPredicted RBP20.18■□□□□ 0.82
SNCAIP-202ENST00000261368 ZBTB40Q9NUA8 1239 aa20.18■□□□□ 0.82
SNCAIP-202ENST00000261368 SHROOM2Q13796 1616 aa20.17■□□□□ 0.82
SNCAIP-202ENST00000261368 GOLGA6L22H0YM25 854 aa20.17■□□□□ 0.82
SNCAIP-202ENST00000261368 KIF1BO60333 1816 aa20.17■□□□□ 0.82
SNCAIP-202ENST00000261368 DCTN1Q14203 1278 aa20.16■□□□□ 0.82
SNCAIP-202ENST00000261368 FBXO31Q5XUX0 539 aaPredicted RBP20.16■□□□□ 0.82
SNCAIP-202ENST00000261368 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
SNCAIP-202ENST00000261368 SMC5Q8IY18 1101 aa20.16■□□□□ 0.82
SNCAIP-202ENST00000261368 TSPYL6Q8N831 410 aa20.16■□□□□ 0.82
SNCAIP-202ENST00000261368 ANP32BQ92688 251 aaKnown RBP20.16■□□□□ 0.82
SNCAIP-202ENST00000261368 EMILIN1Q9Y6C2 1016 aa20.16■□□□□ 0.82
SNCAIP-202ENST00000261368 PLPPR3Q6T4P5 718 aa20.15■□□□□ 0.82
SNCAIP-202ENST00000261368 CD109Q6YHK3 1445 aa20.15■□□□□ 0.82
SNCAIP-202ENST00000261368 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
SNCAIP-202ENST00000261368 CHMP4BQ9H444 224 aaKnown RBP20.15■□□□□ 0.82
SNCAIP-202ENST00000261368 NUCB1Q02818 461 aa20.14■□□□□ 0.81
SNCAIP-202ENST00000261368 PLEKHF1Q96S99 279 aa20.14■□□□□ 0.81
SNCAIP-202ENST00000261368 TWISTNBQ3B726 338 aaPredicted RBP20.13■□□□□ 0.81
SNCAIP-202ENST00000261368 TNPO1Q92973 898 aaKnown RBP20.13■□□□□ 0.81
SNCAIP-202ENST00000261368 NSD2O96028 1365 aa20.13■□□□□ 0.81
SNCAIP-202ENST00000261368 RRS1Q15050 365 aaKnown RBP20.13■□□□□ 0.81
SNCAIP-202ENST00000261368 FCHSD2O94868 740 aa20.13■□□□□ 0.81
SNCAIP-202ENST00000261368 FAM83GA6ND36 823 aa20.12■□□□□ 0.81
SNCAIP-202ENST00000261368 TPRNQ4KMQ1 711 aa20.12■□□□□ 0.81
SNCAIP-202ENST00000261368 MRE11P49959 708 aa20.12■□□□□ 0.81
SNCAIP-202ENST00000261368 CALD1Q05682 793 aaKnown RBP20.12■□□□□ 0.81
SNCAIP-202ENST00000261368 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
SNCAIP-202ENST00000261368 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
SNCAIP-202ENST00000261368 UHRF1BP1LA0JNW5 1464 aa20.11■□□□□ 0.81
SNCAIP-202ENST00000261368 GRPEL1Q9HAV7 217 aa20.11■□□□□ 0.81
SNCAIP-202ENST00000261368 GNAI1P63096 354 aa20.11■□□□□ 0.81
SNCAIP-202ENST00000261368 ZRANB1Q9UGI0 708 aa20.11■□□□□ 0.81
SNCAIP-202ENST00000261368 EFCAB6Q5THR3 1501 aa20.11■□□□□ 0.81
SNCAIP-202ENST00000261368 ATAD2Q6PL18 1390 aa20.1■□□□□ 0.81
SNCAIP-202ENST00000261368 DDX49Q9Y6V7 483 aaKnown RBP20.1■□□□□ 0.81
SNCAIP-202ENST00000261368 SLC4A10Q6U841 1118 aa20.1■□□□□ 0.81
SNCAIP-202ENST00000261368 TBC1D9Q6ZT07 1266 aa20.1■□□□□ 0.81
SNCAIP-202ENST00000261368 NFE2L2Q16236 605 aa20.09■□□□□ 0.81
SNCAIP-202ENST00000261368 NME9Q86XW9 330 aa20.09■□□□□ 0.81
SNCAIP-202ENST00000261368 ABCC11Q96J66 1382 aa20.09■□□□□ 0.81
SNCAIP-202ENST00000261368 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.81
SNCAIP-202ENST00000261368 ALDH1L2Q3SY69 923 aa20.08■□□□□ 0.8
SNCAIP-202ENST00000261368 GCC1Q96CN9 775 aa20.08■□□□□ 0.8
SNCAIP-202ENST00000261368 SLC52A1Q9NWF4 448 aa20.08■□□□□ 0.8
SNCAIP-202ENST00000261368 POLKQ9UBT6 870 aa20.07■□□□□ 0.8
SNCAIP-202ENST00000261368 MBIPQ9NS73 344 aa20.07■□□□□ 0.8
SNCAIP-202ENST00000261368 NLRP1Q9C000 1473 aa20.07■□□□□ 0.8
SNCAIP-202ENST00000261368 SSFA2P28290 1259 aa20.06■□□□□ 0.8
SNCAIP-202ENST00000261368 NOL8Q76FK4 1167 aaKnown RBP20.06■□□□□ 0.8
SNCAIP-202ENST00000261368 COG3Q96JB2 828 aa20.06■□□□□ 0.8
SNCAIP-202ENST00000261368 IQSEC2Q5JU85 1478 aa20.06■□□□□ 0.8
SNCAIP-202ENST00000261368 IL16Q14005 1332 aa20.06■□□□□ 0.8
SNCAIP-202ENST00000261368 CDC45O75419 566 aa20.06■□□□□ 0.8
SNCAIP-202ENST00000261368 K7ELQ4 463 aaPredicted RBP20.05■□□□□ 0.8
SNCAIP-202ENST00000261368 VAMP4O75379 141 aa20.05■□□□□ 0.8
SNCAIP-202ENST00000261368 BMP2KLQ5H9B9 411 aa20.05■□□□□ 0.8
SNCAIP-202ENST00000261368 PPRC1Q5VV67 1664 aaKnown RBP20.05■□□□□ 0.8
SNCAIP-202ENST00000261368 QRICH2Q9H0J4 1663 aa20.05■□□□□ 0.8
SNCAIP-202ENST00000261368 CASC1Q6TDU7 716 aa20.05■□□□□ 0.8
SNCAIP-202ENST00000261368 C8orf58Q8NAV2 365 aa20.05■□□□□ 0.8
SNCAIP-202ENST00000261368 API5Q9BZZ5 524 aaKnown RBP20.05■□□□□ 0.8
SNCAIP-202ENST00000261368 TXNDC2Q86VQ3 553 aa20.04■□□□□ 0.8
SNCAIP-202ENST00000261368 MROH2AA6NES4 1674 aa20.04■□□□□ 0.8
SNCAIP-202ENST00000261368 ZBTB7BO15156 539 aaPredicted RBP20.04■□□□□ 0.8
SNCAIP-202ENST00000261368 CD2BP2O95400 341 aaKnown RBP20.04■□□□□ 0.8
SNCAIP-202ENST00000261368 MCTP1Q6DN14 999 aa20.04■□□□□ 0.8
SNCAIP-202ENST00000261368 C16orf71Q8IYS4 520 aaPredicted RBP20.04■□□□□ 0.8
SNCAIP-202ENST00000261368 NCKAP5LQ9HCH0 1330 aa20.04■□□□□ 0.8
SNCAIP-202ENST00000261368 SMARCA5O60264 1052 aaPredicted RBP20.03■□□□□ 0.8
SNCAIP-202ENST00000261368 KRT24Q2M2I5 525 aa20.03■□□□□ 0.8
SNCAIP-202ENST00000261368 MRPL50Q8N5N7 158 aaKnown RBP20.03■□□□□ 0.8
SNCAIP-202ENST00000261368 KIAA1210Q9ULL0 1709 aa20.02■□□□□ 0.8
SNCAIP-202ENST00000261368 LMOD3Q0VAK6 560 aa20.02■□□□□ 0.79
SNCAIP-202ENST00000261368 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
SNCAIP-202ENST00000261368 PUS7Q96PZ0 661 aaKnown RBP20.01■□□□□ 0.79
SNCAIP-202ENST00000261368 FOXD4L6Q3SYB3 417 aaPredicted RBP20.01■□□□□ 0.79
SNCAIP-202ENST00000261368 FOXD4L3Q6VB84 417 aaPredicted RBP20.01■□□□□ 0.79
SNCAIP-202ENST00000261368 GAS2L2Q8NHY3 880 aa20.01■□□□□ 0.79
SNCAIP-202ENST00000261368 RBM25P49756 843 aaKnown RBP20■□□□□ 0.79
SNCAIP-202ENST00000261368 OSCARQ8IYS5 282 aa20■□□□□ 0.79
SNCAIP-202ENST00000261368 SULT6B1Q6IMI4 303 aa20■□□□□ 0.79
SNCAIP-202ENST00000261368 NECTIN2Q92692 538 aa20■□□□□ 0.79
SNCAIP-202ENST00000261368 MIS18AQ9NYP9 233 aa20■□□□□ 0.79
SNCAIP-202ENST00000261368 SKOR2Q2VWA4 1001 aaPredicted RBP19.99■□□□□ 0.79
SNCAIP-202ENST00000261368 ADGRB3O60242 1522 aa19.99■□□□□ 0.79
SNCAIP-202ENST00000261368 DEPDC5O75140 1603 aa19.99■□□□□ 0.79
SNCAIP-202ENST00000261368 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
SNCAIP-202ENST00000261368 MCM10Q7L590 875 aa19.99■□□□□ 0.79
SNCAIP-202ENST00000261368 TULP4Q9NRJ4 1543 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms