RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 RUNDC1Q96C34 613 aa31.61■■■□□ 2.65
LMO2-201ENST00000257818 PHF23Q9BUL5 403 aaPredicted RBP31.61■■■□□ 2.65
LMO2-201ENST00000257818 TNNQ9UQP3 1299 aa31.6■■■□□ 2.65
LMO2-201ENST00000257818 RLBP1P12271 317 aa31.59■■■□□ 2.65
LMO2-201ENST00000257818 CDK19Q9BWU1 502 aa31.59■■■□□ 2.65
LMO2-201ENST00000257818 PCDHB15Q9Y5E8 787 aa31.59■■■□□ 2.65
LMO2-201ENST00000257818 TCP11L2Q8N4U5 519 aa31.59■■■□□ 2.65
LMO2-201ENST00000257818 A0A1W2PP64 1363 aa31.58■■■□□ 2.65
LMO2-201ENST00000257818 UBR1Q8IWV7 1749 aa31.58■■■□□ 2.65
LMO2-201ENST00000257818 METP08581 1390 aa31.58■■■□□ 2.65
LMO2-201ENST00000257818 ATAD2Q6PL18 1390 aa31.57■■■□□ 2.64
LMO2-201ENST00000257818 PLPPR3Q6T4P5 718 aa31.56■■■□□ 2.64
LMO2-201ENST00000257818 PMFBP1Q8TBY8 1022 aa31.56■■■□□ 2.64
LMO2-201ENST00000257818 DLC1Q96QB1 1528 aa31.56■■■□□ 2.64
LMO2-201ENST00000257818 HDGFP51858 240 aaKnown RBP31.55■■■□□ 2.64
LMO2-201ENST00000257818 BECN1Q14457 450 aa31.54■■■□□ 2.64
LMO2-201ENST00000257818 ABCC11Q96J66 1382 aa31.54■■■□□ 2.64
LMO2-201ENST00000257818 TMEM2Q9UHN6 1383 aa31.54■■■□□ 2.64
LMO2-201ENST00000257818 AAMPQ13685 434 aa31.53■■■□□ 2.64
LMO2-201ENST00000257818 WDR63Q8IWG1 891 aa31.53■■■□□ 2.64
LMO2-201ENST00000257818 BCL2L13Q9BXK5 485 aa31.51■■■□□ 2.64
LMO2-201ENST00000257818 PDZRN3Q9UPQ7 1066 aa31.5■■■□□ 2.63
LMO2-201ENST00000257818 TXNDC2Q86VQ3 553 aa31.5■■■□□ 2.63
LMO2-201ENST00000257818 SLKQ9H2G2 1235 aaPredicted RBP31.5■■■□□ 2.63
LMO2-201ENST00000257818 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.5■■■□□ 2.63
LMO2-201ENST00000257818 CD163L1Q9NR16 1453 aa31.49■■■□□ 2.63
LMO2-201ENST00000257818 TERF2IPQ9NYB0 399 aa31.49■■■□□ 2.63
LMO2-201ENST00000257818 ANTXR1Q9H6X2 564 aa31.49■■■□□ 2.63
LMO2-201ENST00000257818 CABP1Q9NZU7 370 aa31.49■■■□□ 2.63
LMO2-201ENST00000257818 NSD2O96028 1365 aa31.48■■■□□ 2.63
LMO2-201ENST00000257818 MTHFSP49914 203 aa31.48■■■□□ 2.63
LMO2-201ENST00000257818 TBC1D32Q96NH3 1257 aa31.47■■■□□ 2.63
LMO2-201ENST00000257818 C3P01024 1663 aa31.47■■■□□ 2.63
LMO2-201ENST00000257818 CCDC27Q2M243 656 aa31.47■■■□□ 2.63
LMO2-201ENST00000257818 GGNBP2Q9H3C7 697 aa31.45■■■□□ 2.63
LMO2-201ENST00000257818 LTKP29376 864 aa31.45■■■□□ 2.62
LMO2-201ENST00000257818 FER1L4A9Z1Z3 1794 aa31.44■■■□□ 2.62
LMO2-201ENST00000257818 HDGFL2Q7Z4V5 671 aaPredicted RBP31.42■■■□□ 2.62
LMO2-201ENST00000257818 RWDD1Q9H446 243 aaPredicted RBP31.41■■■□□ 2.62
LMO2-201ENST00000257818 TBC1D2Q9BYX2 928 aa31.41■■■□□ 2.62
LMO2-201ENST00000257818 UPF2Q9HAU5 1272 aaKnown RBP31.41■■■□□ 2.62
LMO2-201ENST00000257818 FYB1O15117 783 aa31.4■■■□□ 2.62
LMO2-201ENST00000257818 ADAMTS13Q76LX8 1427 aa31.39■■■□□ 2.61
LMO2-201ENST00000257818 WASLO00401 505 aaPredicted RBP31.38■■■□□ 2.61
LMO2-201ENST00000257818 CFAP53Q96M91 514 aa31.38■■■□□ 2.61
LMO2-201ENST00000257818 MVPQ14764 893 aaKnown RBP31.37■■■□□ 2.61
LMO2-201ENST00000257818 MYH16Q9H6N6 1097 aa31.37■■■□□ 2.61
LMO2-201ENST00000257818 KNDC1Q76NI1 1749 aa31.37■■■□□ 2.61
LMO2-201ENST00000257818 PRKCSHP14314 528 aaPredicted RBP31.36■■■□□ 2.61
LMO2-201ENST00000257818 TECPR2O15040 1411 aa31.36■■■□□ 2.61
LMO2-201ENST00000257818 NCBP3Q53F19 620 aaKnown RBP31.35■■■□□ 2.61
LMO2-201ENST00000257818 PLEKHG1Q9ULL1 1385 aa31.35■■■□□ 2.61
LMO2-201ENST00000257818 ADGRB2O60241 1585 aa31.35■■■□□ 2.61
LMO2-201ENST00000257818 FAM135BQ49AJ0 1406 aa31.34■■■□□ 2.61
LMO2-201ENST00000257818 FAM43AQ8N2R8 423 aa31.34■■■□□ 2.61
LMO2-201ENST00000257818 SIRT1Q96EB6 747 aa31.33■■■□□ 2.61
LMO2-201ENST00000257818 CPS1P31327 1500 aa31.32■■■□□ 2.6
LMO2-201ENST00000257818 ZKSCAN2Q63HK3 967 aa31.32■■■□□ 2.6
LMO2-201ENST00000257818 SLC26A8Q96RN1 970 aa31.32■■■□□ 2.6
LMO2-201ENST00000257818 EID1Q9Y6B2 187 aa31.32■■■□□ 2.6
LMO2-201ENST00000257818 ANKRD26Q9UPS8 1709 aa31.31■■■□□ 2.6
LMO2-201ENST00000257818 U2AF1L5P0DN76 240 aaPredicted RBP31.31■■■□□ 2.6
LMO2-201ENST00000257818 U2AF1Q01081 240 aaKnown RBP eCLIP31.31■■■□□ 2.6
LMO2-201ENST00000257818 ROBO2Q9HCK4 1378 aa31.31■■■□□ 2.6
LMO2-201ENST00000257818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.31■■■□□ 2.6
LMO2-201ENST00000257818 DZIP1LQ8IYY4 767 aaKnown RBP31.29■■■□□ 2.6
LMO2-201ENST00000257818 NCKAP5LQ9HCH0 1330 aa31.29■■■□□ 2.6
LMO2-201ENST00000257818 ATP7BP35670 1465 aa31.29■■■□□ 2.6
LMO2-201ENST00000257818 MED14O60244 1454 aa31.28■■■□□ 2.6
LMO2-201ENST00000257818 PPIP5K1Q6PFW1 1433 aa31.28■■■□□ 2.6
LMO2-201ENST00000257818 TSR2Q969E8 191 aaKnown RBP31.28■■■□□ 2.6
LMO2-201ENST00000257818 NUDT16Q96DE0 195 aaKnown RBP31.28■■■□□ 2.6
LMO2-201ENST00000257818 KIF20BQ96Q89 1820 aa31.28■■■□□ 2.6
LMO2-201ENST00000257818 FTSJ3Q8IY81 847 aaKnown RBP31.27■■■□□ 2.6
LMO2-201ENST00000257818 SLIT1O75093 1534 aa31.25■■■□□ 2.59
LMO2-201ENST00000257818 ARHGAP23Q9P227 1491 aa31.24■■■□□ 2.59
LMO2-201ENST00000257818 CT47B1P0C2W7 299 aaPredicted RBP31.23■■■□□ 2.59
LMO2-201ENST00000257818 THEMISQ8N1K5 641 aaPredicted RBP31.23■■■□□ 2.59
LMO2-201ENST00000257818 SPRYD3Q8NCJ5 442 aa31.22■■■□□ 2.59
LMO2-201ENST00000257818 TRIM27P14373 513 aa31.22■■■□□ 2.59
LMO2-201ENST00000257818 EXOSC9Q06265 439 aaKnown RBP31.22■■■□□ 2.59
LMO2-201ENST00000257818 CPSF1Q10570 1443 aaKnown RBP31.22■■■□□ 2.59
LMO2-201ENST00000257818 PTPRUQ92729 1446 aa31.22■■■□□ 2.59
LMO2-201ENST00000257818 SMC4Q9NTJ3 1288 aa31.21■■■□□ 2.59
LMO2-201ENST00000257818 HDAC1Q13547 482 aaPredicted RBP31.21■■■□□ 2.59
LMO2-201ENST00000257818 PLEKHF1Q96S99 279 aa31.21■■■□□ 2.59
LMO2-201ENST00000257818 C22orf23Q9BZE7 217 aa31.21■■■□□ 2.59
LMO2-201ENST00000257818 CCDC61Q9Y6R9 512 aa31.21■■■□□ 2.59
LMO2-201ENST00000257818 L1TD1Q5T7N2 865 aaKnown RBP31.2■■■□□ 2.59
LMO2-201ENST00000257818 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.2■■■□□ 2.58
LMO2-201ENST00000257818 FBLN1P23142 703 aa31.19■■■□□ 2.58
LMO2-201ENST00000257818 SSH1Q8WYL5 1049 aa31.19■■■□□ 2.58
LMO2-201ENST00000257818 PRR36Q9H6K5 1346 aa31.19■■■□□ 2.58
LMO2-201ENST00000257818 TRIM35Q9UPQ4 493 aa31.18■■■□□ 2.58
LMO2-201ENST00000257818 MFAP1P55081 439 aaKnown RBP31.18■■■□□ 2.58
LMO2-201ENST00000257818 COL3A1P02461 1466 aaPredicted RBP31.17■■■□□ 2.58
LMO2-201ENST00000257818 U2SURPO15042 1029 aaKnown RBP31.17■■■□□ 2.58
LMO2-201ENST00000257818 MCM4P33991 863 aa31.17■■■□□ 2.58
LMO2-201ENST00000257818 TMPOP42166 694 aaKnown RBP31.17■■■□□ 2.58
LMO2-201ENST00000257818 AMOTL2Q9Y2J4 779 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms