RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ZNF692Q9BU19 519 aaPredicted RBP25.15■■□□□ 1.62
TRIM47-201ENST00000254816 MAP2P11137 1827 aaKnown RBP25.15■■□□□ 1.62
TRIM47-201ENST00000254816 FBLN1P23142 703 aa25.15■■□□□ 1.62
TRIM47-201ENST00000254816 CFAP53Q96M91 514 aa25.12■■□□□ 1.61
TRIM47-201ENST00000254816 NWD1Q149M9 1564 aa25.11■■□□□ 1.61
TRIM47-201ENST00000254816 USP6P35125 1406 aa25.1■■□□□ 1.61
TRIM47-201ENST00000254816 SMG6Q86US8 1419 aaKnown RBP25.1■■□□□ 1.61
TRIM47-201ENST00000254816 TTC21BQ7Z4L5 1316 aa25.08■■□□□ 1.61
TRIM47-201ENST00000254816 NUDCQ9Y266 331 aa25.08■■□□□ 1.61
TRIM47-201ENST00000254816 ANKARQ7Z5J8 1434 aa25.08■■□□□ 1.61
TRIM47-201ENST00000254816 NGDNQ8NEJ9 315 aaKnown RBP25.07■■□□□ 1.6
TRIM47-201ENST00000254816 ADGRL3Q9HAR2 1447 aa25.07■■□□□ 1.6
TRIM47-201ENST00000254816 C14orf37Q86TY3 774 aa25.06■■□□□ 1.6
TRIM47-201ENST00000254816 COG3Q96JB2 828 aa25.06■■□□□ 1.6
TRIM47-201ENST00000254816 COL3A1P02461 1466 aaPredicted RBP25.06■■□□□ 1.6
TRIM47-201ENST00000254816 STRCP1A6NGW2 1772 aa25.06■■□□□ 1.6
TRIM47-201ENST00000254816 TSHZ2Q9NRE2 1034 aa25.05■■□□□ 1.6
TRIM47-201ENST00000254816 CDCA7LQ96GN5 454 aa25.05■■□□□ 1.6
TRIM47-201ENST00000254816 LMTK3Q96Q04 1460 aa25.05■■□□□ 1.6
TRIM47-201ENST00000254816 APAF1O14727 1248 aa25.04■■□□□ 1.6
TRIM47-201ENST00000254816 PPM1GO15355 546 aaPredicted RBP25.04■■□□□ 1.6
TRIM47-201ENST00000254816 POLKQ9UBT6 870 aa25.03■■□□□ 1.6
TRIM47-201ENST00000254816 SSH2Q76I76 1423 aa25.03■■□□□ 1.6
TRIM47-201ENST00000254816 PROSER2Q86WR7 435 aaPredicted RBP25.02■■□□□ 1.6
TRIM47-201ENST00000254816 IRX6P78412 446 aaPredicted RBP25.01■■□□□ 1.59
TRIM47-201ENST00000254816 EMILIN1Q9Y6C2 1016 aa25.01■■□□□ 1.59
TRIM47-201ENST00000254816 STRCQ7RTU9 1775 aa25.01■■□□□ 1.59
TRIM47-201ENST00000254816 U2AF1L5P0DN76 240 aaPredicted RBP25■■□□□ 1.59
TRIM47-201ENST00000254816 U2AF1Q01081 240 aaKnown RBP eCLIP25■■□□□ 1.59
TRIM47-201ENST00000254816 U2SURPO15042 1029 aaKnown RBP24.99■■□□□ 1.59
TRIM47-201ENST00000254816 PDE3BQ13370 1112 aa24.99■■□□□ 1.59
TRIM47-201ENST00000254816 RRS1Q15050 365 aaKnown RBP24.99■■□□□ 1.59
TRIM47-201ENST00000254816 PNPLA6Q8IY17 1366 aa24.99■■□□□ 1.59
TRIM47-201ENST00000254816 OVOS2A0A0J9YW53 1432 aa24.98■■□□□ 1.59
TRIM47-201ENST00000254816 OVOS2Q6IE36 1432 aa24.98■■□□□ 1.59
TRIM47-201ENST00000254816 PIK3C2AO00443 1686 aa24.97■■□□□ 1.59
TRIM47-201ENST00000254816 DIAPH1O60610 1272 aaKnown RBP24.96■■□□□ 1.59
TRIM47-201ENST00000254816 RUNDC1Q96C34 613 aa24.96■■□□□ 1.59
TRIM47-201ENST00000254816 PHF8Q9UPP1 1060 aa24.96■■□□□ 1.59
TRIM47-201ENST00000254816 AATKQ6ZMQ8 1374 aa24.96■■□□□ 1.59
TRIM47-201ENST00000254816 TTC21AQ8NDW8 1320 aa24.95■■□□□ 1.58
TRIM47-201ENST00000254816 ZNF521Q96K83 1311 aa24.95■■□□□ 1.58
TRIM47-201ENST00000254816 ESCO1Q5FWF5 840 aa24.95■■□□□ 1.58
TRIM47-201ENST00000254816 SOX12O15370 315 aa24.93■■□□□ 1.58
TRIM47-201ENST00000254816 RRP7AQ9Y3A4 280 aaKnown RBP24.93■■□□□ 1.58
TRIM47-201ENST00000254816 NEUROD2Q15784 382 aa24.92■■□□□ 1.58
TRIM47-201ENST00000254816 IQSEC2Q5JU85 1478 aa24.92■■□□□ 1.58
TRIM47-201ENST00000254816 TCP11L2Q8N4U5 519 aa24.91■■□□□ 1.58
TRIM47-201ENST00000254816 CDK12Q9NYV4 1490 aaPredicted RBP24.91■■□□□ 1.58
TRIM47-201ENST00000254816 MARF1Q9Y4F3 1742 aaKnown RBP24.91■■□□□ 1.58
TRIM47-201ENST00000254816 ORAI2Q96SN7 254 aa24.91■■□□□ 1.58
TRIM47-201ENST00000254816 PAK3O75914 559 aaPredicted RBP24.9■■□□□ 1.58
TRIM47-201ENST00000254816 NUTM2GQ5VZR2 741 aa24.9■■□□□ 1.58
TRIM47-201ENST00000254816 TMEM94Q12767 1356 aa24.9■■□□□ 1.58
TRIM47-201ENST00000254816 GOLGA2Q08379 1002 aa24.88■■□□□ 1.57
TRIM47-201ENST00000254816 PEAK1Q9H792 1746 aa24.88■■□□□ 1.57
TRIM47-201ENST00000254816 USP31Q70CQ4 1352 aa24.88■■□□□ 1.57
TRIM47-201ENST00000254816 C19orf44Q9H6X5 657 aa24.88■■□□□ 1.57
TRIM47-201ENST00000254816 PLEKHF1Q96S99 279 aa24.87■■□□□ 1.57
TRIM47-201ENST00000254816 DMRT2Q9Y5R5 561 aa24.87■■□□□ 1.57
TRIM47-201ENST00000254816 NLRP6P59044 892 aa24.86■■□□□ 1.57
TRIM47-201ENST00000254816 XIRP1Q702N8 1843 aaKnown RBP24.86■■□□□ 1.57
TRIM47-201ENST00000254816 SPINK5Q9NQ38 1064 aaPredicted RBP24.86■■□□□ 1.57
TRIM47-201ENST00000254816 IL13P35225 146 aa24.85■■□□□ 1.57
TRIM47-201ENST00000254816 ABTB2Q8N961 1025 aa24.85■■□□□ 1.57
TRIM47-201ENST00000254816 PSME1Q06323 249 aa24.84■■□□□ 1.57
TRIM47-201ENST00000254816 WWC1Q8IX03 1113 aa24.84■■□□□ 1.57
TRIM47-201ENST00000254816 LRRC7Q96NW7 1537 aa24.84■■□□□ 1.57
TRIM47-201ENST00000254816 DUSP27Q5VZP5 1158 aa24.83■■□□□ 1.57
TRIM47-201ENST00000254816 SLFN5Q08AF3 891 aa24.83■■□□□ 1.57
TRIM47-201ENST00000254816 USP54Q70EL1 1684 aa24.82■■□□□ 1.56
TRIM47-201ENST00000254816 C1orf167Q5SNV9 1468 aa24.82■■□□□ 1.56
TRIM47-201ENST00000254816 FOXO3O43524 673 aa24.82■■□□□ 1.56
TRIM47-201ENST00000254816 HMOX1P09601 288 aa24.82■■□□□ 1.56
TRIM47-201ENST00000254816 XPCQ01831 940 aaPredicted RBP24.82■■□□□ 1.56
TRIM47-201ENST00000254816 NGEFQ8N5V2 710 aa24.82■■□□□ 1.56
TRIM47-201ENST00000254816 RCAN3Q9UKA8 241 aa24.82■■□□□ 1.56
TRIM47-201ENST00000254816 MAPK8IP3Q9UPT6 1336 aa24.8■■□□□ 1.56
TRIM47-201ENST00000254816 ATF3P18847 181 aa24.8■■□□□ 1.56
TRIM47-201ENST00000254816 MAP3K19Q56UN5 1328 aa24.8■■□□□ 1.56
TRIM47-201ENST00000254816 RNF123Q5XPI4 1314 aa24.8■■□□□ 1.56
TRIM47-201ENST00000254816 RSPH6AQ9H0K4 717 aa24.79■■□□□ 1.56
TRIM47-201ENST00000254816 HSP90AB2PQ58FF8 381 aa24.79■■□□□ 1.56
TRIM47-201ENST00000254816 PRKAR2BP31323 418 aa24.78■■□□□ 1.56
TRIM47-201ENST00000254816 ZNF335Q9H4Z2 1342 aaPredicted RBP24.78■■□□□ 1.56
TRIM47-201ENST00000254816 KIF1AQ12756 1690 aa24.78■■□□□ 1.56
TRIM47-201ENST00000254816 FCHSD2O94868 740 aa24.78■■□□□ 1.56
TRIM47-201ENST00000254816 EIF4A2Q14240 407 aaKnown RBP24.78■■□□□ 1.56
TRIM47-201ENST00000254816 MST1RQ04912 1400 aa24.78■■□□□ 1.56
TRIM47-201ENST00000254816 TRMT2AQ8IZ69 625 aaKnown RBP24.77■■□□□ 1.56
TRIM47-201ENST00000254816 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
TRIM47-201ENST00000254816 TMPOP42166 694 aaKnown RBP24.77■■□□□ 1.56
TRIM47-201ENST00000254816 NCOA3Q9Y6Q9 1424 aa24.76■■□□□ 1.55
TRIM47-201ENST00000254816 E9PSI1 815 aa24.75■■□□□ 1.55
TRIM47-201ENST00000254816 PNNQ9H307 717 aaKnown RBP24.75■■□□□ 1.55
TRIM47-201ENST00000254816 CCDC27Q2M243 656 aa24.74■■□□□ 1.55
TRIM47-201ENST00000254816 TRPM3Q9HCF6 1732 aaPredicted RBP24.74■■□□□ 1.55
TRIM47-201ENST00000254816 LTN1O94822 1766 aa24.74■■□□□ 1.55
TRIM47-201ENST00000254816 DCCP43146 1447 aa24.74■■□□□ 1.55
TRIM47-201ENST00000254816 PLEKHG5O94827 1062 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms