RNA–Protein interactions for RNA: ENST00000250241.12

ILF3-201, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-201ENST00000250241 NCKAP5LQ9HCH0 1330 aa16.68■□□□□ 0.26
ILF3-201ENST00000250241 TERF2IPQ9NYB0 399 aa16.67■□□□□ 0.26
ILF3-201ENST00000250241 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
ILF3-201ENST00000250241 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
ILF3-201ENST00000250241 SLC26A8Q96RN1 970 aa16.67■□□□□ 0.26
ILF3-201ENST00000250241 PRDM4Q9UKN5 801 aa16.67■□□□□ 0.26
ILF3-201ENST00000250241 KDM2BQ8NHM5 1336 aa16.67■□□□□ 0.26
ILF3-201ENST00000250241 ZFYVE9O95405 1425 aa16.67■□□□□ 0.26
ILF3-201ENST00000250241 ARHGEF40Q8TER5 1519 aa16.67■□□□□ 0.26
ILF3-201ENST00000250241 ALKQ9UM73 1620 aa16.67■□□□□ 0.26
ILF3-201ENST00000250241 CENPQQ7L2Z9 268 aaPredicted RBP16.67■□□□□ 0.26
ILF3-201ENST00000250241 HDGFL2Q7Z4V5 671 aaPredicted RBP16.67■□□□□ 0.26
ILF3-201ENST00000250241 CFAP53Q96M91 514 aa16.67■□□□□ 0.26
ILF3-201ENST00000250241 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
ILF3-201ENST00000250241 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
ILF3-201ENST00000250241 ANKRD36BQ8N2N9 1353 aa16.66■□□□□ 0.26
ILF3-201ENST00000250241 TNRQ92752 1358 aa16.66■□□□□ 0.26
ILF3-201ENST00000250241 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
ILF3-201ENST00000250241 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
ILF3-201ENST00000250241 METP08581 1390 aa16.65■□□□□ 0.26
ILF3-201ENST00000250241 BCAR3O75815 825 aa16.64■□□□□ 0.25
ILF3-201ENST00000250241 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
ILF3-201ENST00000250241 PTPRMP28827 1452 aa16.64■□□□□ 0.25
ILF3-201ENST00000250241 PANK2Q9BZ23 570 aa16.64■□□□□ 0.25
ILF3-201ENST00000250241 HDGFP51858 240 aaKnown RBP16.63■□□□□ 0.25
ILF3-201ENST00000250241 DUSP27Q5VZP5 1158 aa16.63■□□□□ 0.25
ILF3-201ENST00000250241 FYB1O15117 783 aa16.62■□□□□ 0.25
ILF3-201ENST00000250241 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
ILF3-201ENST00000250241 LTKP29376 864 aa16.61■□□□□ 0.25
ILF3-201ENST00000250241 TCP11L2Q8N4U5 519 aa16.61■□□□□ 0.25
ILF3-201ENST00000250241 SPATA31D1Q6ZQQ2 1576 aa16.61■□□□□ 0.25
ILF3-201ENST00000250241 REREQ9P2R6 1566 aa16.61■□□□□ 0.25
ILF3-201ENST00000250241 IGHDP01880 384 aa16.61■□□□□ 0.25
ILF3-201ENST00000250241 SLFN5Q08AF3 891 aa16.59■□□□□ 0.25
ILF3-201ENST00000250241 ZRANB1Q9UGI0 708 aa16.59■□□□□ 0.25
ILF3-201ENST00000250241 POLR3AO14802 1390 aaPredicted RBP16.59■□□□□ 0.25
ILF3-201ENST00000250241 SOX12O15370 315 aa16.58■□□□□ 0.24
ILF3-201ENST00000250241 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
ILF3-201ENST00000250241 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
ILF3-201ENST00000250241 CANXP27824 592 aaKnown RBP16.57■□□□□ 0.24
ILF3-201ENST00000250241 PUS7Q96PZ0 661 aaKnown RBP16.57■□□□□ 0.24
ILF3-201ENST00000250241 WWC1Q8IX03 1113 aa16.57■□□□□ 0.24
ILF3-201ENST00000250241 TPM2P07951 284 aa16.56■□□□□ 0.24
ILF3-201ENST00000250241 NUDT16Q96DE0 195 aaKnown RBP16.56■□□□□ 0.24
ILF3-201ENST00000250241 EID1Q9Y6B2 187 aa16.56■□□□□ 0.24
ILF3-201ENST00000250241 NME9Q86XW9 330 aa16.56■□□□□ 0.24
ILF3-201ENST00000250241 PANK1Q8TE04 598 aa16.56■□□□□ 0.24
ILF3-201ENST00000250241 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
ILF3-201ENST00000250241 ZNF521Q96K83 1311 aa16.56■□□□□ 0.24
ILF3-201ENST00000250241 TMEM2Q9UHN6 1383 aa16.55■□□□□ 0.24
ILF3-201ENST00000250241 USP19O94966 1318 aa16.55■□□□□ 0.24
ILF3-201ENST00000250241 ABCC11Q96J66 1382 aa16.54■□□□□ 0.24
ILF3-201ENST00000250241 BCL2L13Q9BXK5 485 aa16.54■□□□□ 0.24
ILF3-201ENST00000250241 E9PSI1 815 aa16.53■□□□□ 0.24
ILF3-201ENST00000250241 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
ILF3-201ENST00000250241 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.52■□□□□ 0.24
ILF3-201ENST00000250241 MAPK8IP3Q9UPT6 1336 aa16.51■□□□□ 0.23
ILF3-201ENST00000250241 PPIP5K1Q6PFW1 1433 aa16.51■□□□□ 0.23
ILF3-201ENST00000250241 HMOX1P09601 288 aa16.51■□□□□ 0.23
ILF3-201ENST00000250241 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
ILF3-201ENST00000250241 DIAPH1O60610 1272 aaKnown RBP16.51■□□□□ 0.23
ILF3-201ENST00000250241 RRS1Q15050 365 aaKnown RBP16.51■□□□□ 0.23
ILF3-201ENST00000250241 RBM33Q96EV2 1170 aaKnown RBP16.51■□□□□ 0.23
ILF3-201ENST00000250241 BECN1Q14457 450 aa16.5■□□□□ 0.23
ILF3-201ENST00000250241 PMFBP1Q8TBY8 1022 aa16.5■□□□□ 0.23
ILF3-201ENST00000250241 NSD2O96028 1365 aa16.5■□□□□ 0.23
ILF3-201ENST00000250241 NINLQ9Y2I6 1382 aa16.5■□□□□ 0.23
ILF3-201ENST00000250241 CD163L1Q9NR16 1453 aa16.5■□□□□ 0.23
ILF3-201ENST00000250241 ROBO2Q9HCK4 1378 aa16.5■□□□□ 0.23
ILF3-201ENST00000250241 TNNQ9UQP3 1299 aa16.5■□□□□ 0.23
ILF3-201ENST00000250241 CCDC61Q9Y6R9 512 aa16.5■□□□□ 0.23
ILF3-201ENST00000250241 GOLGA6L3A6NEY3 463 aa16.49■□□□□ 0.23
ILF3-201ENST00000250241 AMOTL2Q9Y2J4 779 aa16.49■□□□□ 0.23
ILF3-201ENST00000250241 CLUAP1Q96AJ1 413 aa16.49■□□□□ 0.23
ILF3-201ENST00000250241 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
ILF3-201ENST00000250241 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
ILF3-201ENST00000250241 BBXQ8WY36 941 aaPredicted RBP16.47■□□□□ 0.23
ILF3-201ENST00000250241 PRR36Q9H6K5 1346 aa16.47■□□□□ 0.23
ILF3-201ENST00000250241 COG3Q96JB2 828 aa16.46■□□□□ 0.23
ILF3-201ENST00000250241 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.23
ILF3-201ENST00000250241 POLKQ9UBT6 870 aa16.46■□□□□ 0.23
ILF3-201ENST00000250241 NRXN3Q9Y4C0 1643 aa16.46■□□□□ 0.22
ILF3-201ENST00000250241 THEMISQ8N1K5 641 aaPredicted RBP16.45■□□□□ 0.22
ILF3-201ENST00000250241 NKTRP30414 1462 aaKnown RBP16.45■□□□□ 0.22
ILF3-201ENST00000250241 RIPK4P57078 832 aa16.45■□□□□ 0.22
ILF3-201ENST00000250241 TRMT2AQ8IZ69 625 aaKnown RBP16.45■□□□□ 0.22
ILF3-201ENST00000250241 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
ILF3-201ENST00000250241 SHPRHQ149N8 1683 aa16.44■□□□□ 0.22
ILF3-201ENST00000250241 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
ILF3-201ENST00000250241 TMPOP42166 694 aaKnown RBP16.43■□□□□ 0.22
ILF3-201ENST00000250241 ADAMTS13Q76LX8 1427 aa16.43■□□□□ 0.22
ILF3-201ENST00000250241 UBR1Q8IWV7 1749 aa16.43■□□□□ 0.22
ILF3-201ENST00000250241 ESPNB1AK53 854 aa16.43■□□□□ 0.22
ILF3-201ENST00000250241 ARID3AQ99856 593 aa16.43■□□□□ 0.22
ILF3-201ENST00000250241 ACEP12821 1306 aa16.42■□□□□ 0.22
ILF3-201ENST00000250241 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
ILF3-201ENST00000250241 NAP1L2Q9ULW6 460 aaPredicted RBP16.42■□□□□ 0.22
ILF3-201ENST00000250241 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
ILF3-201ENST00000250241 MAP7D2Q96T17 732 aa16.41■□□□□ 0.22
ILF3-201ENST00000250241 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms