RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 RALGAPBQ86X10 1494 aa30.17■■■□□ 2.42
HCFC1R1-201ENST00000248089 PPIP5K1Q6PFW1 1433 aa30.16■■■□□ 2.42
HCFC1R1-201ENST00000248089 ACEP12821 1306 aa30.15■■■□□ 2.42
HCFC1R1-201ENST00000248089 POLR3AO14802 1390 aaPredicted RBP30.15■■■□□ 2.42
HCFC1R1-201ENST00000248089 SLIT2O94813 1529 aa30.14■■■□□ 2.42
HCFC1R1-201ENST00000248089 NWD2Q9ULI1 1742 aa30.13■■■□□ 2.41
HCFC1R1-201ENST00000248089 CARD11Q9BXL7 1154 aa30.12■■■□□ 2.41
HCFC1R1-201ENST00000248089 PLEKHG3A1L390 1219 aa30.11■■■□□ 2.41
HCFC1R1-201ENST00000248089 EVC2Q86UK5 1308 aa30.11■■■□□ 2.41
HCFC1R1-201ENST00000248089 PHRF1Q9P1Y6 1649 aaKnown RBP30.11■■■□□ 2.41
HCFC1R1-201ENST00000248089 UNC5CLQ8IV45 518 aa30.07■■■□□ 2.4
HCFC1R1-201ENST00000248089 COL14A1Q05707 1796 aaKnown RBP30.07■■■□□ 2.4
HCFC1R1-201ENST00000248089 PCGF6Q9BYE7 350 aa30.06■■■□□ 2.4
HCFC1R1-201ENST00000248089 NRAPQ86VF7 1730 aa30.05■■■□□ 2.4
HCFC1R1-201ENST00000248089 NUTM2GQ5VZR2 741 aa30.05■■■□□ 2.4
HCFC1R1-201ENST00000248089 GLI3P10071 1580 aa30.03■■■□□ 2.4
HCFC1R1-201ENST00000248089 CABP1Q9NZU7 370 aa30.03■■■□□ 2.4
HCFC1R1-201ENST00000248089 GJD4Q96KN9 370 aaPredicted RBP30.02■■■□□ 2.4
HCFC1R1-201ENST00000248089 FAM83GA6ND36 823 aa30.01■■■□□ 2.39
HCFC1R1-201ENST00000248089 AKAP12Q02952 1782 aa30■■■□□ 2.39
HCFC1R1-201ENST00000248089 ABTB2Q8N961 1025 aa29.99■■■□□ 2.39
HCFC1R1-201ENST00000248089 NRKQ7Z2Y5 1582 aa29.98■■■□□ 2.39
HCFC1R1-201ENST00000248089 CCDC9Q9Y3X0 531 aaKnown RBP29.98■■■□□ 2.39
HCFC1R1-201ENST00000248089 SBNO2Q9Y2G9 1366 aa29.98■■■□□ 2.39
HCFC1R1-201ENST00000248089 USP6P35125 1406 aa29.97■■■□□ 2.39
HCFC1R1-201ENST00000248089 UPF1Q92900 1129 aaKnown RBP eCLIP29.97■■■□□ 2.39
HCFC1R1-201ENST00000248089 PRDM11Q9NQV5 511 aa29.96■■■□□ 2.39
HCFC1R1-201ENST00000248089 BTG4Q9NY30 223 aa29.96■■■□□ 2.39
HCFC1R1-201ENST00000248089 ATAD2Q6PL18 1390 aa29.95■■■□□ 2.39
HCFC1R1-201ENST00000248089 KIAA0232Q92628 1395 aa29.94■■■□□ 2.38
HCFC1R1-201ENST00000248089 VPS72Q15906 364 aa29.94■■■□□ 2.38
HCFC1R1-201ENST00000248089 PIK3C2AO00443 1686 aa29.93■■■□□ 2.38
HCFC1R1-201ENST00000248089 BRWD3Q6RI45 1802 aa29.93■■■□□ 2.38
HCFC1R1-201ENST00000248089 BRD4O60885 1362 aaPredicted RBP29.92■■■□□ 2.38
HCFC1R1-201ENST00000248089 ZC3H6P61129 1189 aaKnown RBP29.91■■■□□ 2.38
HCFC1R1-201ENST00000248089 MON2Q7Z3U7 1717 aa29.9■■■□□ 2.38
HCFC1R1-201ENST00000248089 CHRNA2Q15822 529 aa29.89■■■□□ 2.38
HCFC1R1-201ENST00000248089 USP19O94966 1318 aa29.89■■■□□ 2.38
HCFC1R1-201ENST00000248089 NLRP13Q86W25 1043 aa29.88■■■□□ 2.37
HCFC1R1-201ENST00000248089 CLSPNQ9HAW4 1339 aa29.88■■■□□ 2.37
HCFC1R1-201ENST00000248089 EP400Q96L91 3159 aa29.88■■■□□ 2.37
HCFC1R1-201ENST00000248089 SSH2Q76I76 1423 aa29.86■■■□□ 2.37
HCFC1R1-201ENST00000248089 KTN1Q86UP2 1357 aaKnown RBP29.84■■■□□ 2.37
HCFC1R1-201ENST00000248089 CPSF1Q10570 1443 aaKnown RBP29.83■■■□□ 2.37
HCFC1R1-201ENST00000248089 ST20-MTHFSA0A0A6YYL1 179 aa29.83■■■□□ 2.37
HCFC1R1-201ENST00000248089 NLRP6P59044 892 aa29.83■■■□□ 2.37
HCFC1R1-201ENST00000248089 ZNF692Q9BU19 519 aaPredicted RBP29.83■■■□□ 2.37
HCFC1R1-201ENST00000248089 SLIT3O75094 1523 aa29.82■■■□□ 2.36
HCFC1R1-201ENST00000248089 A0A0G2JS52 829 aa29.82■■■□□ 2.36
HCFC1R1-201ENST00000248089 MYT1Q01538 1121 aa29.82■■■□□ 2.36
HCFC1R1-201ENST00000248089 SEPT12Q8IYM1 358 aa29.82■■■□□ 2.36
HCFC1R1-201ENST00000248089 TMC1Q8TDI8 760 aa29.82■■■□□ 2.36
HCFC1R1-201ENST00000248089 LMO7Q8WWI1 1683 aa29.82■■■□□ 2.36
HCFC1R1-201ENST00000248089 TTC21BQ7Z4L5 1316 aa29.81■■■□□ 2.36
HCFC1R1-201ENST00000248089 USP47Q96K76 1375 aa29.8■■■□□ 2.36
HCFC1R1-201ENST00000248089 GCP02774 474 aa29.8■■■□□ 2.36
HCFC1R1-201ENST00000248089 CCER1Q8TC90 406 aaPredicted RBP29.8■■■□□ 2.36
HCFC1R1-201ENST00000248089 STRN4Q9NRL3 753 aa29.8■■■□□ 2.36
HCFC1R1-201ENST00000248089 CPDO75976 1380 aa29.79■■■□□ 2.36
HCFC1R1-201ENST00000248089 ZBTB7CA1YPR0 619 aa29.79■■■□□ 2.36
HCFC1R1-201ENST00000248089 FAM98CQ17RN3 349 aaKnown RBP29.79■■■□□ 2.36
HCFC1R1-201ENST00000248089 TESK2Q96S53 571 aa29.78■■■□□ 2.36
HCFC1R1-201ENST00000248089 CD163L1Q9NR16 1453 aa29.78■■■□□ 2.36
HCFC1R1-201ENST00000248089 SPATA31A5Q5VU36 1347 aa29.77■■■□□ 2.36
HCFC1R1-201ENST00000248089 SPATA31A7Q8IWB4 1347 aa29.77■■■□□ 2.36
HCFC1R1-201ENST00000248089 CAMTA1Q9Y6Y1 1673 aa29.77■■■□□ 2.36
HCFC1R1-201ENST00000248089 TIMELESSQ9UNS1 1208 aa29.77■■■□□ 2.36
HCFC1R1-201ENST00000248089 TTC21AQ8NDW8 1320 aa29.76■■■□□ 2.36
HCFC1R1-201ENST00000248089 ONECUT3O60422 494 aaPredicted RBP29.74■■■□□ 2.35
HCFC1R1-201ENST00000248089 HDGFL2Q7Z4V5 671 aaPredicted RBP29.74■■■□□ 2.35
HCFC1R1-201ENST00000248089 SLC12A5Q9H2X9 1139 aa29.74■■■□□ 2.35
HCFC1R1-201ENST00000248089 THSD7AQ9UPZ6 1657 aa29.74■■■□□ 2.35
HCFC1R1-201ENST00000248089 EVA1CP58658 441 aa29.73■■■□□ 2.35
HCFC1R1-201ENST00000248089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.73■■■□□ 2.35
HCFC1R1-201ENST00000248089 SOX12O15370 315 aa29.71■■■□□ 2.35
HCFC1R1-201ENST00000248089 SPATA31A1Q5TZJ5 1347 aa29.71■■■□□ 2.35
HCFC1R1-201ENST00000248089 USP54Q70EL1 1684 aa29.7■■■□□ 2.35
HCFC1R1-201ENST00000248089 A0A1W2PP64 1363 aa29.7■■■□□ 2.35
HCFC1R1-201ENST00000248089 KRT27Q7Z3Y8 459 aa29.7■■■□□ 2.35
HCFC1R1-201ENST00000248089 PUS7Q96PZ0 661 aaKnown RBP29.7■■■□□ 2.35
HCFC1R1-201ENST00000248089 COL5A2P05997 1499 aaPredicted RBP29.69■■■□□ 2.34
HCFC1R1-201ENST00000248089 SLC24A1O60721 1099 aa29.69■■■□□ 2.34
HCFC1R1-201ENST00000248089 TERF2IPQ9NYB0 399 aa29.69■■■□□ 2.34
HCFC1R1-201ENST00000248089 USP35Q9P2H5 1018 aa29.69■■■□□ 2.34
HCFC1R1-201ENST00000248089 COL18A1P39060 1754 aa29.68■■■□□ 2.34
HCFC1R1-201ENST00000248089 RGPD5Q99666 1765 aa29.68■■■□□ 2.34
HCFC1R1-201ENST00000248089 EDC4Q6P2E9 1401 aaKnown RBP29.68■■■□□ 2.34
HCFC1R1-201ENST00000248089 LARP1Q6PKG0 1096 aaKnown RBP29.67■■■□□ 2.34
HCFC1R1-201ENST00000248089 NFAT5O94916 1531 aa29.66■■■□□ 2.34
HCFC1R1-201ENST00000248089 NINLQ9Y2I6 1382 aa29.66■■■□□ 2.34
HCFC1R1-201ENST00000248089 AATKQ6ZMQ8 1374 aa29.65■■■□□ 2.34
HCFC1R1-201ENST00000248089 TMF1P82094 1093 aa29.65■■■□□ 2.34
HCFC1R1-201ENST00000248089 NME9Q86XW9 330 aa29.65■■■□□ 2.34
HCFC1R1-201ENST00000248089 KCNH5Q8NCM2 988 aa29.65■■■□□ 2.34
HCFC1R1-201ENST00000248089 ZRANB1Q9UGI0 708 aa29.65■■■□□ 2.34
HCFC1R1-201ENST00000248089 LTN1O94822 1766 aa29.63■■■□□ 2.33
HCFC1R1-201ENST00000248089 BLMP54132 1417 aaPredicted RBP29.62■■■□□ 2.33
HCFC1R1-201ENST00000248089 CCDC125Q86Z20 511 aa29.61■■■□□ 2.33
HCFC1R1-201ENST00000248089 USP31Q70CQ4 1352 aa29.61■■■□□ 2.33
HCFC1R1-201ENST00000248089 ARHGEF25Q86VW2 580 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms