RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 NRKQ7Z2Y5 1582 aa26.02■■□□□ 1.76
SBDS-201ENST00000246868 FYB1O15117 783 aa26.02■■□□□ 1.76
SBDS-201ENST00000246868 MORC1Q86VD1 984 aa26.02■■□□□ 1.76
SBDS-201ENST00000246868 TTC21AQ8NDW8 1320 aa26.01■■□□□ 1.75
SBDS-201ENST00000246868 FOXO3O43524 673 aa25.99■■□□□ 1.75
SBDS-201ENST00000246868 GGNBP2Q9H3C7 697 aa25.99■■□□□ 1.75
SBDS-201ENST00000246868 SSH2Q76I76 1423 aa25.99■■□□□ 1.75
SBDS-201ENST00000246868 ANKRD26Q9UPS8 1709 aa25.99■■□□□ 1.75
SBDS-201ENST00000246868 NME9Q86XW9 330 aa25.96■■□□□ 1.75
SBDS-201ENST00000246868 PAK3O75914 559 aaPredicted RBP25.96■■□□□ 1.75
SBDS-201ENST00000246868 NLRP13Q86W25 1043 aa25.96■■□□□ 1.75
SBDS-201ENST00000246868 NPHP3Q7Z494 1330 aa25.95■■□□□ 1.74
SBDS-201ENST00000246868 BRINP3Q76B58 766 aa25.95■■□□□ 1.74
SBDS-201ENST00000246868 COG3Q96JB2 828 aa25.95■■□□□ 1.74
SBDS-201ENST00000246868 KRT28Q7Z3Y7 464 aa25.92■■□□□ 1.74
SBDS-201ENST00000246868 PPP2R1AP30153 589 aa25.92■■□□□ 1.74
SBDS-201ENST00000246868 TNNT2P45379 298 aaPredicted RBP25.92■■□□□ 1.74
SBDS-201ENST00000246868 MRS2Q9HD23 443 aa25.91■■□□□ 1.74
SBDS-201ENST00000246868 XPCQ01831 940 aaPredicted RBP25.9■■□□□ 1.74
SBDS-201ENST00000246868 ABTB2Q8N961 1025 aa25.9■■□□□ 1.74
SBDS-201ENST00000246868 IQSEC2Q5JU85 1478 aa25.89■■□□□ 1.74
SBDS-201ENST00000246868 PIK3C2AO00443 1686 aa25.88■■□□□ 1.73
SBDS-201ENST00000246868 TOM1O60784 492 aa25.88■■□□□ 1.73
SBDS-201ENST00000246868 SCAF1Q9H7N4 1312 aaKnown RBP25.87■■□□□ 1.73
SBDS-201ENST00000246868 USP31Q70CQ4 1352 aa25.87■■□□□ 1.73
SBDS-201ENST00000246868 OVOS2A0A0J9YW53 1432 aa25.87■■□□□ 1.73
SBDS-201ENST00000246868 OVOS2Q6IE36 1432 aa25.87■■□□□ 1.73
SBDS-201ENST00000246868 ZRANB1Q9UGI0 708 aa25.87■■□□□ 1.73
SBDS-201ENST00000246868 TRPM3Q9HCF6 1732 aaPredicted RBP25.87■■□□□ 1.73
SBDS-201ENST00000246868 NLRP6P59044 892 aa25.86■■□□□ 1.73
SBDS-201ENST00000246868 SBNO1A3KN83 1393 aa25.85■■□□□ 1.73
SBDS-201ENST00000246868 DDX17Q92841 729 aaKnown RBP25.85■■□□□ 1.73
SBDS-201ENST00000246868 CCDC184Q52MB2 194 aa25.83■■□□□ 1.73
SBDS-201ENST00000246868 LMOD2Q6P5Q4 547 aa25.83■■□□□ 1.73
SBDS-201ENST00000246868 PXDNQ92626 1479 aa25.83■■□□□ 1.73
SBDS-201ENST00000246868 CERKQ8TCT0 537 aa25.82■■□□□ 1.72
SBDS-201ENST00000246868 USP54Q70EL1 1684 aa25.82■■□□□ 1.72
SBDS-201ENST00000246868 ROBO1Q9Y6N7 1651 aa25.82■■□□□ 1.72
SBDS-201ENST00000246868 NUTM2GQ5VZR2 741 aa25.81■■□□□ 1.72
SBDS-201ENST00000246868 AATKQ6ZMQ8 1374 aa25.81■■□□□ 1.72
SBDS-201ENST00000246868 NHSL1Q5SYE7 1610 aa25.8■■□□□ 1.72
SBDS-201ENST00000246868 UBAP1LF5GYI3 381 aa25.8■■□□□ 1.72
SBDS-201ENST00000246868 TNS3Q68CZ2 1445 aa25.79■■□□□ 1.72
SBDS-201ENST00000246868 SOS2Q07890 1332 aaPredicted RBP25.79■■□□□ 1.72
SBDS-201ENST00000246868 MTHFSP49914 203 aa25.79■■□□□ 1.72
SBDS-201ENST00000246868 CFAP53Q96M91 514 aa25.79■■□□□ 1.72
SBDS-201ENST00000246868 ALS2Q96Q42 1657 aa25.78■■□□□ 1.72
SBDS-201ENST00000246868 ARHGEF10O15013 1369 aa25.77■■□□□ 1.72
SBDS-201ENST00000246868 MAP2P11137 1827 aaKnown RBP25.77■■□□□ 1.72
SBDS-201ENST00000246868 SPATA31A3Q5VYP0 1347 aa25.77■■□□□ 1.72
SBDS-201ENST00000246868 MARF1Q9Y4F3 1742 aaKnown RBP25.75■■□□□ 1.71
SBDS-201ENST00000246868 SOX12O15370 315 aa25.74■■□□□ 1.71
SBDS-201ENST00000246868 KCNH5Q8NCM2 988 aa25.74■■□□□ 1.71
SBDS-201ENST00000246868 POLKQ9UBT6 870 aa25.74■■□□□ 1.71
SBDS-201ENST00000246868 PIP4K2BP78356 416 aa25.74■■□□□ 1.71
SBDS-201ENST00000246868 AHDC1Q5TGY3 1603 aaPredicted RBP25.73■■□□□ 1.71
SBDS-201ENST00000246868 PPM1GO15355 546 aaPredicted RBP25.72■■□□□ 1.71
SBDS-201ENST00000246868 FBLN1P23142 703 aa25.72■■□□□ 1.71
SBDS-201ENST00000246868 FAM9BQ8IZU0 186 aa25.72■■□□□ 1.71
SBDS-201ENST00000246868 PNISRQ8TF01 805 aaKnown RBP25.72■■□□□ 1.71
SBDS-201ENST00000246868 RRS1Q15050 365 aaKnown RBP25.71■■□□□ 1.71
SBDS-201ENST00000246868 SMG6Q86US8 1419 aaKnown RBP25.71■■□□□ 1.71
SBDS-201ENST00000246868 USP19O94966 1318 aa25.71■■□□□ 1.71
SBDS-201ENST00000246868 EMILIN1Q9Y6C2 1016 aa25.7■■□□□ 1.7
SBDS-201ENST00000246868 SLIT3O75094 1523 aa25.69■■□□□ 1.7
SBDS-201ENST00000246868 WDR43Q15061 677 aaKnown RBP eCLIP25.69■■□□□ 1.7
SBDS-201ENST00000246868 LRRC59Q96AG4 307 aaKnown RBP25.68■■□□□ 1.7
SBDS-201ENST00000246868 CDK12Q9NYV4 1490 aaPredicted RBP25.68■■□□□ 1.7
SBDS-201ENST00000246868 GCP02774 474 aa25.67■■□□□ 1.7
SBDS-201ENST00000246868 PLEKHG5O94827 1062 aa25.66■■□□□ 1.7
SBDS-201ENST00000246868 PNPLA6Q8IY17 1366 aa25.66■■□□□ 1.7
SBDS-201ENST00000246868 NFAT5O94916 1531 aa25.66■■□□□ 1.7
SBDS-201ENST00000246868 MAP3K19Q56UN5 1328 aa25.66■■□□□ 1.7
SBDS-201ENST00000246868 INSRP06213 1382 aa25.65■■□□□ 1.7
SBDS-201ENST00000246868 PHLPP1O60346 1717 aa25.65■■□□□ 1.7
SBDS-201ENST00000246868 AMPHP49418 695 aa25.65■■□□□ 1.7
SBDS-201ENST00000246868 MED1Q15648 1581 aaPredicted RBP25.65■■□□□ 1.7
SBDS-201ENST00000246868 KIF24Q5T7B8 1368 aa25.65■■□□□ 1.7
SBDS-201ENST00000246868 NUDCQ9Y266 331 aa25.64■■□□□ 1.7
SBDS-201ENST00000246868 DIAPH1O60610 1272 aaKnown RBP25.63■■□□□ 1.69
SBDS-201ENST00000246868 YTHDC1Q96MU7 727 aaKnown RBP25.63■■□□□ 1.69
SBDS-201ENST00000246868 FLT4P35916 1363 aa25.62■■□□□ 1.69
SBDS-201ENST00000246868 COL3A1P02461 1466 aaPredicted RBP25.62■■□□□ 1.69
SBDS-201ENST00000246868 LTN1O94822 1766 aa25.61■■□□□ 1.69
SBDS-201ENST00000246868 PHRF1Q9P1Y6 1649 aaKnown RBP25.61■■□□□ 1.69
SBDS-201ENST00000246868 RTL1A6NKG5 1358 aa25.6■■□□□ 1.69
SBDS-201ENST00000246868 HAP1P54257 671 aaPredicted RBP25.59■■□□□ 1.69
SBDS-201ENST00000246868 PEAK1Q9H792 1746 aa25.59■■□□□ 1.69
SBDS-201ENST00000246868 CABLES1Q8TDN4 633 aa25.59■■□□□ 1.69
SBDS-201ENST00000246868 SHPRHQ149N8 1683 aa25.59■■□□□ 1.69
SBDS-201ENST00000246868 COL16A1Q07092 1604 aaPredicted RBP25.59■■□□□ 1.69
SBDS-201ENST00000246868 CRYBG1Q9Y4K1 1723 aa25.58■■□□□ 1.69
SBDS-201ENST00000246868 ZBTB7CA1YPR0 619 aa25.58■■□□□ 1.69
SBDS-201ENST00000246868 ARHGEF25Q86VW2 580 aa25.57■■□□□ 1.68
SBDS-201ENST00000246868 ADAMTS8Q9UP79 889 aa25.57■■□□□ 1.68
SBDS-201ENST00000246868 U2SURPO15042 1029 aaKnown RBP25.55■■□□□ 1.68
SBDS-201ENST00000246868 HOXC9P31274 260 aa25.55■■□□□ 1.68
SBDS-201ENST00000246868 HSP90AB2PQ58FF8 381 aa25.55■■□□□ 1.68
SBDS-201ENST00000246868 ZC3H6P61129 1189 aaKnown RBP25.55■■□□□ 1.68
SBDS-201ENST00000246868 IP6K1Q92551 441 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms