RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 TRIM35Q9UPQ4 493 aa22.42■■□□□ 1.18
LRFN3-201ENST00000246529 PPM1GO15355 546 aaPredicted RBP22.41■■□□□ 1.18
LRFN3-201ENST00000246529 C8orf34Q49A92 452 aa22.41■■□□□ 1.18
LRFN3-201ENST00000246529 METP08581 1390 aa22.41■■□□□ 1.18
LRFN3-201ENST00000246529 MED14O60244 1454 aa22.4■■□□□ 1.18
LRFN3-201ENST00000246529 DIAPH1O60610 1272 aaKnown RBP22.4■■□□□ 1.18
LRFN3-201ENST00000246529 MAPK8IP3Q9UPT6 1336 aa22.4■■□□□ 1.18
LRFN3-201ENST00000246529 TXNDC2Q86VQ3 553 aa22.4■■□□□ 1.18
LRFN3-201ENST00000246529 FAM161AQ3B820 660 aa22.39■■□□□ 1.18
LRFN3-201ENST00000246529 ZMYM3Q14202 1370 aa22.39■■□□□ 1.17
LRFN3-201ENST00000246529 ESF1Q9H501 851 aaKnown RBP22.39■■□□□ 1.17
LRFN3-201ENST00000246529 NCKAP5LQ9HCH0 1330 aa22.38■■□□□ 1.17
LRFN3-201ENST00000246529 DLC1Q96QB1 1528 aa22.38■■□□□ 1.17
LRFN3-201ENST00000246529 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
LRFN3-201ENST00000246529 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
LRFN3-201ENST00000246529 EXOSC9Q06265 439 aaKnown RBP22.37■■□□□ 1.17
LRFN3-201ENST00000246529 NCBP3Q53F19 620 aaKnown RBP22.37■■□□□ 1.17
LRFN3-201ENST00000246529 RIPK4P57078 832 aa22.36■■□□□ 1.17
LRFN3-201ENST00000246529 PCDHB15Q9Y5E8 787 aa22.36■■□□□ 1.17
LRFN3-201ENST00000246529 PNPLA6Q8IY17 1366 aa22.36■■□□□ 1.17
LRFN3-201ENST00000246529 POLKQ9UBT6 870 aa22.35■■□□□ 1.17
LRFN3-201ENST00000246529 ZRANB1Q9UGI0 708 aa22.35■■□□□ 1.17
LRFN3-201ENST00000246529 NRXN3Q9Y4C0 1643 aa22.35■■□□□ 1.17
LRFN3-201ENST00000246529 WASLO00401 505 aaPredicted RBP22.34■■□□□ 1.17
LRFN3-201ENST00000246529 NME9Q86XW9 330 aa22.33■■□□□ 1.17
LRFN3-201ENST00000246529 LAS1LQ9Y4W2 734 aaKnown RBP22.33■■□□□ 1.17
LRFN3-201ENST00000246529 KIF20BQ96Q89 1820 aa22.32■■□□□ 1.16
LRFN3-201ENST00000246529 PPIP5K1Q6PFW1 1433 aa22.32■■□□□ 1.16
LRFN3-201ENST00000246529 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.32■■□□□ 1.16
LRFN3-201ENST00000246529 ATP7BP35670 1465 aa22.32■■□□□ 1.16
LRFN3-201ENST00000246529 SMC4Q9NTJ3 1288 aa22.31■■□□□ 1.16
LRFN3-201ENST00000246529 EMILIN1Q9Y6C2 1016 aa22.31■■□□□ 1.16
LRFN3-201ENST00000246529 PRKAR2BP31323 418 aa22.3■■□□□ 1.16
LRFN3-201ENST00000246529 SLC4A3P48751 1232 aa22.3■■□□□ 1.16
LRFN3-201ENST00000246529 HMOX1P09601 288 aa22.3■■□□□ 1.16
LRFN3-201ENST00000246529 ZKSCAN2Q63HK3 967 aa22.29■■□□□ 1.16
LRFN3-201ENST00000246529 SSH1Q8WYL5 1049 aa22.29■■□□□ 1.16
LRFN3-201ENST00000246529 NUDT16Q96DE0 195 aaKnown RBP22.29■■□□□ 1.16
LRFN3-201ENST00000246529 KIF13AQ9H1H9 1805 aa22.29■■□□□ 1.16
LRFN3-201ENST00000246529 RSPH6AQ9H0K4 717 aa22.28■■□□□ 1.16
LRFN3-201ENST00000246529 MVPQ14764 893 aaKnown RBP22.28■■□□□ 1.16
LRFN3-201ENST00000246529 FTSJ3Q8IY81 847 aaKnown RBP22.28■■□□□ 1.16
LRFN3-201ENST00000246529 TNRQ92752 1358 aa22.28■■□□□ 1.16
LRFN3-201ENST00000246529 LRRC7Q96NW7 1537 aa22.27■■□□□ 1.16
LRFN3-201ENST00000246529 CPSF1Q10570 1443 aaKnown RBP22.27■■□□□ 1.16
LRFN3-201ENST00000246529 FCHSD2O94868 740 aa22.27■■□□□ 1.16
LRFN3-201ENST00000246529 DZIP1LQ8IYY4 767 aaKnown RBP22.27■■□□□ 1.16
LRFN3-201ENST00000246529 PHACTR3Q96KR7 559 aa22.27■■□□□ 1.16
LRFN3-201ENST00000246529 PMFBP1Q8TBY8 1022 aa22.26■■□□□ 1.15
LRFN3-201ENST00000246529 DDRGK1Q96HY6 314 aa22.26■■□□□ 1.15
LRFN3-201ENST00000246529 TRIM27P14373 513 aa22.25■■□□□ 1.15
LRFN3-201ENST00000246529 EDC4Q6P2E9 1401 aaKnown RBP22.25■■□□□ 1.15
LRFN3-201ENST00000246529 CT47B1P0C2W7 299 aaPredicted RBP22.25■■□□□ 1.15
LRFN3-201ENST00000246529 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
LRFN3-201ENST00000246529 IL16Q14005 1332 aa22.24■■□□□ 1.15
LRFN3-201ENST00000246529 PNNQ9H307 717 aaKnown RBP22.24■■□□□ 1.15
LRFN3-201ENST00000246529 RRS1Q15050 365 aaKnown RBP22.24■■□□□ 1.15
LRFN3-201ENST00000246529 NOB1Q9ULX3 412 aaKnown RBP22.24■■□□□ 1.15
LRFN3-201ENST00000246529 CCDC61Q9Y6R9 512 aa22.23■■□□□ 1.15
LRFN3-201ENST00000246529 FAM135BQ49AJ0 1406 aa22.23■■□□□ 1.15
LRFN3-201ENST00000246529 DEKP35659 375 aaKnown RBP22.23■■□□□ 1.15
LRFN3-201ENST00000246529 CPS1P31327 1500 aa22.23■■□□□ 1.15
LRFN3-201ENST00000246529 PRR36Q9H6K5 1346 aa22.22■■□□□ 1.15
LRFN3-201ENST00000246529 PDZRN3Q9UPQ7 1066 aa22.22■■□□□ 1.15
LRFN3-201ENST00000246529 TMEM2Q9UHN6 1383 aa22.22■■□□□ 1.15
LRFN3-201ENST00000246529 NUTM2FA1L443 756 aa22.21■■□□□ 1.15
LRFN3-201ENST00000246529 SEC24BO95487 1268 aa22.21■■□□□ 1.15
LRFN3-201ENST00000246529 IL13P35225 146 aa22.21■■□□□ 1.15
LRFN3-201ENST00000246529 HDGFP51858 240 aaKnown RBP22.21■■□□□ 1.15
LRFN3-201ENST00000246529 AAMPQ13685 434 aa22.21■■□□□ 1.15
LRFN3-201ENST00000246529 ROBO2Q9HCK4 1378 aa22.21■■□□□ 1.15
LRFN3-201ENST00000246529 CDC42BPGQ6DT37 1551 aa22.21■■□□□ 1.15
LRFN3-201ENST00000246529 CEBPAP49715 358 aaPredicted RBP22.21■■□□□ 1.15
LRFN3-201ENST00000246529 RTL5Q5HYW3 569 aaPredicted RBP22.2■■□□□ 1.14
LRFN3-201ENST00000246529 ATF7IPQ6VMQ6 1270 aa22.2■■□□□ 1.14
LRFN3-201ENST00000246529 ITPRIPQ8IWB1 547 aa22.2■■□□□ 1.14
LRFN3-201ENST00000246529 COG3Q96JB2 828 aa22.2■■□□□ 1.14
LRFN3-201ENST00000246529 RWDD1Q9H446 243 aaPredicted RBP22.2■■□□□ 1.14
LRFN3-201ENST00000246529 PLPPR3Q6T4P5 718 aa22.19■■□□□ 1.14
LRFN3-201ENST00000246529 MAP2P11137 1827 aaKnown RBP22.19■■□□□ 1.14
LRFN3-201ENST00000246529 TECPR2O15040 1411 aa22.19■■□□□ 1.14
LRFN3-201ENST00000246529 NEFMP07197 916 aa22.19■■□□□ 1.14
LRFN3-201ENST00000246529 LTKP29376 864 aa22.19■■□□□ 1.14
LRFN3-201ENST00000246529 NFE2L2Q16236 605 aa22.18■■□□□ 1.14
LRFN3-201ENST00000246529 TMEM57Q8N5G2 664 aa22.17■■□□□ 1.14
LRFN3-201ENST00000246529 SIRT1Q96EB6 747 aa22.17■■□□□ 1.14
LRFN3-201ENST00000246529 ADAMTS13Q76LX8 1427 aa22.17■■□□□ 1.14
LRFN3-201ENST00000246529 USP19O94966 1318 aa22.16■■□□□ 1.14
LRFN3-201ENST00000246529 SLC26A8Q96RN1 970 aa22.15■■□□□ 1.14
LRFN3-201ENST00000246529 UBR1Q8IWV7 1749 aa22.15■■□□□ 1.14
LRFN3-201ENST00000246529 DAXXQ9UER7 740 aaPredicted RBP22.14■■□□□ 1.14
LRFN3-201ENST00000246529 KNDC1Q76NI1 1749 aa22.14■■□□□ 1.13
LRFN3-201ENST00000246529 CDK12Q9NYV4 1490 aaPredicted RBP22.14■■□□□ 1.13
LRFN3-201ENST00000246529 AATKQ6ZMQ8 1374 aa22.14■■□□□ 1.13
LRFN3-201ENST00000246529 DDX19BQ9UMR2 479 aa22.13■■□□□ 1.13
LRFN3-201ENST00000246529 TSPYL6Q8N831 410 aa22.13■■□□□ 1.13
LRFN3-201ENST00000246529 BCL11AQ9H165 835 aa22.13■■□□□ 1.13
LRFN3-201ENST00000246529 ELL2O00472 640 aaPredicted RBP22.12■■□□□ 1.13
LRFN3-201ENST00000246529 FAM83GA6ND36 823 aa22.11■■□□□ 1.13
LRFN3-201ENST00000246529 MON2Q7Z3U7 1717 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms