RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 NRKQ7Z2Y5 1582 aa23.88■■□□□ 1.41
KLHDC3-201ENST00000244670 CCDC146Q8IYE0 955 aa23.88■■□□□ 1.41
KLHDC3-201ENST00000244670 NWD1Q149M9 1564 aa23.88■■□□□ 1.41
KLHDC3-201ENST00000244670 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
KLHDC3-201ENST00000244670 FBLN1P23142 703 aa23.86■■□□□ 1.41
KLHDC3-201ENST00000244670 USP6P35125 1406 aa23.85■■□□□ 1.41
KLHDC3-201ENST00000244670 ANKARQ7Z5J8 1434 aa23.85■■□□□ 1.41
KLHDC3-201ENST00000244670 ADGRL3Q9HAR2 1447 aa23.85■■□□□ 1.41
KLHDC3-201ENST00000244670 C14orf37Q86TY3 774 aa23.84■■□□□ 1.41
KLHDC3-201ENST00000244670 TTC21BQ7Z4L5 1316 aa23.84■■□□□ 1.41
KLHDC3-201ENST00000244670 NGDNQ8NEJ9 315 aaKnown RBP23.83■■□□□ 1.41
KLHDC3-201ENST00000244670 NUDCQ9Y266 331 aa23.83■■□□□ 1.41
KLHDC3-201ENST00000244670 LMTK3Q96Q04 1460 aa23.83■■□□□ 1.41
KLHDC3-201ENST00000244670 MAP2P11137 1827 aaKnown RBP23.82■■□□□ 1.4
KLHDC3-201ENST00000244670 COG3Q96JB2 828 aa23.82■■□□□ 1.4
KLHDC3-201ENST00000244670 PROSER2Q86WR7 435 aaPredicted RBP23.8■■□□□ 1.4
KLHDC3-201ENST00000244670 COL3A1P02461 1466 aaPredicted RBP23.79■■□□□ 1.4
KLHDC3-201ENST00000244670 PPM1GO15355 546 aaPredicted RBP23.78■■□□□ 1.4
KLHDC3-201ENST00000244670 STRCP1A6NGW2 1772 aa23.78■■□□□ 1.4
KLHDC3-201ENST00000244670 IRX6P78412 446 aaPredicted RBP23.77■■□□□ 1.4
KLHDC3-201ENST00000244670 POLKQ9UBT6 870 aa23.77■■□□□ 1.4
KLHDC3-201ENST00000244670 SSH2Q76I76 1423 aa23.77■■□□□ 1.4
KLHDC3-201ENST00000244670 APAF1O14727 1248 aa23.76■■□□□ 1.39
KLHDC3-201ENST00000244670 EMILIN1Q9Y6C2 1016 aa23.75■■□□□ 1.39
KLHDC3-201ENST00000244670 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
KLHDC3-201ENST00000244670 U2AF1L5P0DN76 240 aaPredicted RBP23.74■■□□□ 1.39
KLHDC3-201ENST00000244670 U2AF1Q01081 240 aaKnown RBP eCLIP23.74■■□□□ 1.39
KLHDC3-201ENST00000244670 CDCA7LQ96GN5 454 aa23.74■■□□□ 1.39
KLHDC3-201ENST00000244670 U2SURPO15042 1029 aaKnown RBP23.73■■□□□ 1.39
KLHDC3-201ENST00000244670 RRS1Q15050 365 aaKnown RBP23.73■■□□□ 1.39
KLHDC3-201ENST00000244670 PHF8Q9UPP1 1060 aa23.73■■□□□ 1.39
KLHDC3-201ENST00000244670 OVOS2A0A0J9YW53 1432 aa23.73■■□□□ 1.39
KLHDC3-201ENST00000244670 OVOS2Q6IE36 1432 aa23.73■■□□□ 1.39
KLHDC3-201ENST00000244670 PNPLA6Q8IY17 1366 aa23.73■■□□□ 1.39
KLHDC3-201ENST00000244670 AATKQ6ZMQ8 1374 aa23.72■■□□□ 1.39
KLHDC3-201ENST00000244670 PDE3BQ13370 1112 aa23.72■■□□□ 1.39
KLHDC3-201ENST00000244670 TTC21AQ8NDW8 1320 aa23.72■■□□□ 1.39
KLHDC3-201ENST00000244670 DIAPH1O60610 1272 aaKnown RBP23.71■■□□□ 1.39
KLHDC3-201ENST00000244670 ESCO1Q5FWF5 840 aa23.71■■□□□ 1.39
KLHDC3-201ENST00000244670 PIK3C2AO00443 1686 aa23.7■■□□□ 1.38
KLHDC3-201ENST00000244670 RUNDC1Q96C34 613 aa23.7■■□□□ 1.38
KLHDC3-201ENST00000244670 SOX12O15370 315 aa23.69■■□□□ 1.38
KLHDC3-201ENST00000244670 TMEM94Q12767 1356 aa23.68■■□□□ 1.38
KLHDC3-201ENST00000244670 CDK12Q9NYV4 1490 aaPredicted RBP23.67■■□□□ 1.38
KLHDC3-201ENST00000244670 PAK3O75914 559 aaPredicted RBP23.67■■□□□ 1.38
KLHDC3-201ENST00000244670 RNF123Q5XPI4 1314 aa23.66■■□□□ 1.38
KLHDC3-201ENST00000244670 ZNF521Q96K83 1311 aa23.66■■□□□ 1.38
KLHDC3-201ENST00000244670 NEUROD2Q15784 382 aa23.66■■□□□ 1.38
KLHDC3-201ENST00000244670 NUTM2GQ5VZR2 741 aa23.66■■□□□ 1.38
KLHDC3-201ENST00000244670 ORAI2Q96SN7 254 aa23.66■■□□□ 1.38
KLHDC3-201ENST00000244670 RRP7AQ9Y3A4 280 aaKnown RBP23.66■■□□□ 1.38
KLHDC3-201ENST00000244670 IQSEC2Q5JU85 1478 aa23.66■■□□□ 1.38
KLHDC3-201ENST00000244670 C19orf44Q9H6X5 657 aa23.65■■□□□ 1.38
KLHDC3-201ENST00000244670 TCP11L2Q8N4U5 519 aa23.65■■□□□ 1.38
KLHDC3-201ENST00000244670 USP31Q70CQ4 1352 aa23.64■■□□□ 1.37
KLHDC3-201ENST00000244670 NLRP6P59044 892 aa23.63■■□□□ 1.37
KLHDC3-201ENST00000244670 GOLGA2Q08379 1002 aa23.62■■□□□ 1.37
KLHDC3-201ENST00000244670 MARF1Q9Y4F3 1742 aaKnown RBP23.62■■□□□ 1.37
KLHDC3-201ENST00000244670 PSME1Q06323 249 aa23.61■■□□□ 1.37
KLHDC3-201ENST00000244670 ABTB2Q8N961 1025 aa23.61■■□□□ 1.37
KLHDC3-201ENST00000244670 PEAK1Q9H792 1746 aa23.61■■□□□ 1.37
KLHDC3-201ENST00000244670 ERICH6BQ5W0A0 696 aa23.61■■□□□ 1.37
KLHDC3-201ENST00000244670 C1orf167Q5SNV9 1468 aa23.61■■□□□ 1.37
KLHDC3-201ENST00000244670 ATF3P18847 181 aa23.59■■□□□ 1.37
KLHDC3-201ENST00000244670 IL13P35225 146 aa23.59■■□□□ 1.37
KLHDC3-201ENST00000244670 PLEKHF1Q96S99 279 aa23.59■■□□□ 1.37
KLHDC3-201ENST00000244670 FOXO3O43524 673 aa23.59■■□□□ 1.37
KLHDC3-201ENST00000244670 XPCQ01831 940 aaPredicted RBP23.59■■□□□ 1.37
KLHDC3-201ENST00000244670 DMRT2Q9Y5R5 561 aa23.59■■□□□ 1.37
KLHDC3-201ENST00000244670 LRRC7Q96NW7 1537 aa23.58■■□□□ 1.37
KLHDC3-201ENST00000244670 XIRP1Q702N8 1843 aaKnown RBP23.58■■□□□ 1.37
KLHDC3-201ENST00000244670 NGEFQ8N5V2 710 aa23.58■■□□□ 1.37
KLHDC3-201ENST00000244670 WWC1Q8IX03 1113 aa23.57■■□□□ 1.36
KLHDC3-201ENST00000244670 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
KLHDC3-201ENST00000244670 USP54Q70EL1 1684 aa23.57■■□□□ 1.36
KLHDC3-201ENST00000244670 ZNF335Q9H4Z2 1342 aaPredicted RBP23.57■■□□□ 1.36
KLHDC3-201ENST00000244670 MAPK8IP3Q9UPT6 1336 aa23.57■■□□□ 1.36
KLHDC3-201ENST00000244670 HMOX1P09601 288 aa23.57■■□□□ 1.36
KLHDC3-201ENST00000244670 MST1RQ04912 1400 aa23.56■■□□□ 1.36
KLHDC3-201ENST00000244670 NCOA3Q9Y6Q9 1424 aa23.56■■□□□ 1.36
KLHDC3-201ENST00000244670 MAP3K19Q56UN5 1328 aa23.56■■□□□ 1.36
KLHDC3-201ENST00000244670 SLFN5Q08AF3 891 aa23.55■■□□□ 1.36
KLHDC3-201ENST00000244670 DUSP27Q5VZP5 1158 aa23.55■■□□□ 1.36
KLHDC3-201ENST00000244670 KIF1AQ12756 1690 aa23.55■■□□□ 1.36
KLHDC3-201ENST00000244670 RCAN3Q9UKA8 241 aa23.55■■□□□ 1.36
KLHDC3-201ENST00000244670 DCCP43146 1447 aa23.54■■□□□ 1.36
KLHDC3-201ENST00000244670 HSP90AB2PQ58FF8 381 aa23.54■■□□□ 1.36
KLHDC3-201ENST00000244670 RSPH6AQ9H0K4 717 aa23.54■■□□□ 1.36
KLHDC3-201ENST00000244670 FCHSD2O94868 740 aa23.53■■□□□ 1.36
KLHDC3-201ENST00000244670 PRKAR2BP31323 418 aa23.53■■□□□ 1.36
KLHDC3-201ENST00000244670 MSH6P52701 1360 aa23.53■■□□□ 1.36
KLHDC3-201ENST00000244670 EIF4A2Q14240 407 aaKnown RBP23.53■■□□□ 1.36
KLHDC3-201ENST00000244670 PNNQ9H307 717 aaKnown RBP23.51■■□□□ 1.35
KLHDC3-201ENST00000244670 PPP4R2Q9NY27 417 aa23.51■■□□□ 1.35
KLHDC3-201ENST00000244670 TMPOP42166 694 aaKnown RBP23.51■■□□□ 1.35
KLHDC3-201ENST00000244670 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
KLHDC3-201ENST00000244670 SBNO1A3KN83 1393 aa23.5■■□□□ 1.35
KLHDC3-201ENST00000244670 E9PSI1 815 aa23.5■■□□□ 1.35
KLHDC3-201ENST00000244670 AMPHP49418 695 aa23.5■■□□□ 1.35
KLHDC3-201ENST00000244670 CADPS2Q86UW7 1296 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms