RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 APAF1O14727 1248 aa12.88□□□□□ -0.35
MDH1-201ENST00000233114 PLIN1O60240 522 aa12.87□□□□□ -0.35
MDH1-201ENST00000233114 BACH2Q9BYV9 841 aa12.87□□□□□ -0.35
MDH1-201ENST00000233114 AGLP35573 1532 aa12.87□□□□□ -0.35
MDH1-201ENST00000233114 RAPGEF3O95398 923 aa12.86□□□□□ -0.35
MDH1-201ENST00000233114 C7P10643 843 aa12.86□□□□□ -0.35
MDH1-201ENST00000233114 PDE4AP27815 886 aa12.86□□□□□ -0.35
MDH1-201ENST00000233114 CFAP53Q96M91 514 aa12.86□□□□□ -0.35
MDH1-201ENST00000233114 MED14O60244 1454 aa12.86□□□□□ -0.35
MDH1-201ENST00000233114 RUNDC1Q96C34 613 aa12.86□□□□□ -0.35
MDH1-201ENST00000233114 CCDC61Q9Y6R9 512 aa12.86□□□□□ -0.35
MDH1-201ENST00000233114 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
MDH1-201ENST00000233114 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
MDH1-201ENST00000233114 AAMPQ13685 434 aa12.85□□□□□ -0.35
MDH1-201ENST00000233114 CCDC27Q2M243 656 aa12.85□□□□□ -0.35
MDH1-201ENST00000233114 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
MDH1-201ENST00000233114 ATAD2Q6PL18 1390 aa12.85□□□□□ -0.35
MDH1-201ENST00000233114 SLC12A5Q9H2X9 1139 aa12.84□□□□□ -0.35
MDH1-201ENST00000233114 MYO5BQ9ULV0 1848 aa12.84□□□□□ -0.35
MDH1-201ENST00000233114 IDI1Q13907 227 aa12.83□□□□□ -0.35
MDH1-201ENST00000233114 PDE3AQ14432 1141 aa12.83□□□□□ -0.35
MDH1-201ENST00000233114 WDR63Q8IWG1 891 aa12.83□□□□□ -0.35
MDH1-201ENST00000233114 ZBTB47Q9UFB7 747 aaPredicted RBP12.83□□□□□ -0.35
MDH1-201ENST00000233114 ABCC11Q96J66 1382 aa12.83□□□□□ -0.36
MDH1-201ENST00000233114 PTPRMP28827 1452 aa12.83□□□□□ -0.36
MDH1-201ENST00000233114 ADGRB2O60241 1585 aa12.83□□□□□ -0.36
MDH1-201ENST00000233114 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
MDH1-201ENST00000233114 TMEM132EQ6IEE7 984 aa12.83□□□□□ -0.36
MDH1-201ENST00000233114 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
MDH1-201ENST00000233114 POTEMA6NI47 508 aa12.82□□□□□ -0.36
MDH1-201ENST00000233114 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
MDH1-201ENST00000233114 DLC1Q96QB1 1528 aa12.82□□□□□ -0.36
MDH1-201ENST00000233114 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
MDH1-201ENST00000233114 YTHDC2Q9H6S0 1430 aaKnown RBP12.8□□□□□ -0.36
MDH1-201ENST00000233114 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
MDH1-201ENST00000233114 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
MDH1-201ENST00000233114 ALKQ9UM73 1620 aa12.79□□□□□ -0.36
MDH1-201ENST00000233114 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
MDH1-201ENST00000233114 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
MDH1-201ENST00000233114 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
MDH1-201ENST00000233114 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
MDH1-201ENST00000233114 MTHFSP49914 203 aa12.78□□□□□ -0.36
MDH1-201ENST00000233114 TERF2IPQ9NYB0 399 aa12.78□□□□□ -0.36
MDH1-201ENST00000233114 A0A1W2PP64 1363 aa12.78□□□□□ -0.36
MDH1-201ENST00000233114 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.36
MDH1-201ENST00000233114 POTEGQ6S5H5 508 aa12.77□□□□□ -0.36
MDH1-201ENST00000233114 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.36
MDH1-201ENST00000233114 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.37
MDH1-201ENST00000233114 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
MDH1-201ENST00000233114 ZMYM3Q14202 1370 aa12.76□□□□□ -0.37
MDH1-201ENST00000233114 ARHGEF40Q8TER5 1519 aa12.76□□□□□ -0.37
MDH1-201ENST00000233114 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
MDH1-201ENST00000233114 MYH16Q9H6N6 1097 aa12.76□□□□□ -0.37
MDH1-201ENST00000233114 NLRP1Q9C000 1473 aa12.75□□□□□ -0.37
MDH1-201ENST00000233114 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
MDH1-201ENST00000233114 CDC42BPGQ6DT37 1551 aa12.75□□□□□ -0.37
MDH1-201ENST00000233114 ATP7BP35670 1465 aa12.75□□□□□ -0.37
MDH1-201ENST00000233114 CD163L1Q9NR16 1453 aa12.75□□□□□ -0.37
MDH1-201ENST00000233114 BCAR3O75815 825 aa12.74□□□□□ -0.37
MDH1-201ENST00000233114 TPRNQ4KMQ1 711 aa12.74□□□□□ -0.37
MDH1-201ENST00000233114 CABP2Q9NPB3 220 aa12.74□□□□□ -0.37
MDH1-201ENST00000233114 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
MDH1-201ENST00000233114 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
MDH1-201ENST00000233114 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
MDH1-201ENST00000233114 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
MDH1-201ENST00000233114 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
MDH1-201ENST00000233114 PNNQ9H307 717 aaKnown RBP12.73□□□□□ -0.37
MDH1-201ENST00000233114 A2ML1A8K2U0 1454 aa12.73□□□□□ -0.37
MDH1-201ENST00000233114 IL16Q14005 1332 aa12.73□□□□□ -0.37
MDH1-201ENST00000233114 MAPK8IP3Q9UPT6 1336 aa12.73□□□□□ -0.37
MDH1-201ENST00000233114 RARSP54136 660 aaKnown RBP12.73□□□□□ -0.37
MDH1-201ENST00000233114 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
MDH1-201ENST00000233114 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
MDH1-201ENST00000233114 CANXP27824 592 aaKnown RBP12.72□□□□□ -0.37
MDH1-201ENST00000233114 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
MDH1-201ENST00000233114 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
MDH1-201ENST00000233114 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
MDH1-201ENST00000233114 CLUAP1Q96AJ1 413 aa12.72□□□□□ -0.37
MDH1-201ENST00000233114 PODXL2Q9NZ53 605 aa12.72□□□□□ -0.37
MDH1-201ENST00000233114 POGKQ9P215 609 aa12.72□□□□□ -0.37
MDH1-201ENST00000233114 TRPC6Q9Y210 931 aa12.72□□□□□ -0.37
MDH1-201ENST00000233114 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
MDH1-201ENST00000233114 MAP3K13O43283 966 aa12.71□□□□□ -0.37
MDH1-201ENST00000233114 NUTM2DQ5VT03 806 aaPredicted RBP12.71□□□□□ -0.37
MDH1-201ENST00000233114 PRAM1Q96QH2 718 aa12.71□□□□□ -0.37
MDH1-201ENST00000233114 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
MDH1-201ENST00000233114 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
MDH1-201ENST00000233114 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
MDH1-201ENST00000233114 USP35Q9P2H5 1018 aa12.7□□□□□ -0.38
MDH1-201ENST00000233114 KNDC1Q76NI1 1749 aa12.7□□□□□ -0.38
MDH1-201ENST00000233114 RIMS2Q9UQ26 1411 aa12.7□□□□□ -0.38
MDH1-201ENST00000233114 PPM1GO15355 546 aaPredicted RBP12.7□□□□□ -0.38
MDH1-201ENST00000233114 FAM69CQ0P6D2 419 aa12.7□□□□□ -0.38
MDH1-201ENST00000233114 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
MDH1-201ENST00000233114 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
MDH1-201ENST00000233114 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
MDH1-201ENST00000233114 RTL5Q5HYW3 569 aaPredicted RBP12.69□□□□□ -0.38
MDH1-201ENST00000233114 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
MDH1-201ENST00000233114 STK26Q9P289 416 aa12.69□□□□□ -0.38
MDH1-201ENST00000233114 FYB1O15117 783 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms