RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 PDLIM2Q96JY6 352 aa20.84■□□□□ 0.93
RAB35-201ENST00000229340 LMBRD1Q9NUN5 540 aa20.84■□□□□ 0.93
RAB35-201ENST00000229340 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
RAB35-201ENST00000229340 FOXD4L5Q5VV16 416 aaPredicted RBP20.83■□□□□ 0.93
RAB35-201ENST00000229340 FOXD4L4Q8WXT5 416 aaPredicted RBP20.83■□□□□ 0.93
RAB35-201ENST00000229340 ZBTB40Q9NUA8 1239 aa20.83■□□□□ 0.93
RAB35-201ENST00000229340 CEP152O94986 1710 aa20.83■□□□□ 0.92
RAB35-201ENST00000229340 IBTKQ9P2D0 1353 aaPredicted RBP20.82■□□□□ 0.92
RAB35-201ENST00000229340 IQSEC2Q5JU85 1478 aa20.82■□□□□ 0.92
RAB35-201ENST00000229340 JPH4Q96JJ6 628 aa20.82■□□□□ 0.92
RAB35-201ENST00000229340 SLC12A5Q9H2X9 1139 aa20.82■□□□□ 0.92
RAB35-201ENST00000229340 SHPRHQ149N8 1683 aa20.82■□□□□ 0.92
RAB35-201ENST00000229340 HS1BP3Q53T59 392 aa20.81■□□□□ 0.92
RAB35-201ENST00000229340 UNC13BO14795 1591 aa20.81■□□□□ 0.92
RAB35-201ENST00000229340 SYCP2Q9BX26 1530 aa20.81■□□□□ 0.92
RAB35-201ENST00000229340 NSD3Q9BZ95 1437 aa20.81■□□□□ 0.92
RAB35-201ENST00000229340 SYCE3A1L190 88 aa20.81■□□□□ 0.92
RAB35-201ENST00000229340 FAM177BA6PVY3 158 aa20.81■□□□□ 0.92
RAB35-201ENST00000229340 BMP2KLQ5H9B9 411 aa20.81■□□□□ 0.92
RAB35-201ENST00000229340 SCAPERQ9BY12 1400 aa20.8■□□□□ 0.92
RAB35-201ENST00000229340 SASS6Q6UVJ0 657 aa20.8■□□□□ 0.92
RAB35-201ENST00000229340 GPT2Q8TD30 523 aa20.8■□□□□ 0.92
RAB35-201ENST00000229340 ERVK-7P63135 1459 aa20.8■□□□□ 0.92
RAB35-201ENST00000229340 DNTTIP2Q5QJE6 756 aaKnown RBP20.79■□□□□ 0.92
RAB35-201ENST00000229340 NSFL1CQ9UNZ2 370 aaKnown RBP20.79■□□□□ 0.92
RAB35-201ENST00000229340 KIF16BQ96L93 1317 aa20.78■□□□□ 0.92
RAB35-201ENST00000229340 IQGAP3Q86VI3 1631 aa20.78■□□□□ 0.92
RAB35-201ENST00000229340 CSPP1Q1MSJ5 1256 aa20.78■□□□□ 0.92
RAB35-201ENST00000229340 CLEC17AQ6ZS10 378 aa20.78■□□□□ 0.92
RAB35-201ENST00000229340 PTMAP06454 111 aaKnown RBP20.77■□□□□ 0.92
RAB35-201ENST00000229340 CBX1P83916 185 aa20.77■□□□□ 0.92
RAB35-201ENST00000229340 ABCA8O94911 1581 aa20.77■□□□□ 0.91
RAB35-201ENST00000229340 CCDC27Q2M243 656 aa20.77■□□□□ 0.91
RAB35-201ENST00000229340 ZGPATQ8N5A5 531 aaKnown RBP20.77■□□□□ 0.91
RAB35-201ENST00000229340 TMEM63CQ9P1W3 806 aa20.77■□□□□ 0.91
RAB35-201ENST00000229340 CDC42BPBQ9Y5S2 1711 aa20.76■□□□□ 0.91
RAB35-201ENST00000229340 SHROOM2Q13796 1616 aa20.76■□□□□ 0.91
RAB35-201ENST00000229340 U2SURPO15042 1029 aaKnown RBP20.76■□□□□ 0.91
RAB35-201ENST00000229340 MTERF4Q7Z6M4 381 aaKnown RBP20.76■□□□□ 0.91
RAB35-201ENST00000229340 CCDC94Q9BW85 323 aaPredicted RBP20.76■□□□□ 0.91
RAB35-201ENST00000229340 RSPH4AQ5TD94 716 aa20.75■□□□□ 0.91
RAB35-201ENST00000229340 CARMIL2Q6F5E8 1435 aa20.75■□□□□ 0.91
RAB35-201ENST00000229340 ZSCAN20P17040 1043 aaPredicted RBP20.75■□□□□ 0.91
RAB35-201ENST00000229340 CFAP53Q96M91 514 aa20.75■□□□□ 0.91
RAB35-201ENST00000229340 DMTNQ08495 405 aa20.74■□□□□ 0.91
RAB35-201ENST00000229340 CCDC39Q9UFE4 941 aa20.74■□□□□ 0.91
RAB35-201ENST00000229340 ZNF830Q96NB3 372 aaPredicted RBP20.74■□□□□ 0.91
RAB35-201ENST00000229340 ATP10AO60312 1499 aa20.73■□□□□ 0.91
RAB35-201ENST00000229340 KANK1Q14678 1352 aa20.73■□□□□ 0.91
RAB35-201ENST00000229340 NUCB2P80303 420 aa20.73■□□□□ 0.91
RAB35-201ENST00000229340 C17orf53Q8N3J3 647 aaPredicted RBP20.71■□□□□ 0.91
RAB35-201ENST00000229340 LRSAM1Q6UWE0 723 aa20.71■□□□□ 0.91
RAB35-201ENST00000229340 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.71■□□□□ 0.91
RAB35-201ENST00000229340 ADGRF5Q8IZF2 1346 aa20.71■□□□□ 0.91
RAB35-201ENST00000229340 TTC37Q6PGP7 1564 aa20.7■□□□□ 0.9
RAB35-201ENST00000229340 CYP2E1P05181 493 aaPredicted RBP20.7■□□□□ 0.9
RAB35-201ENST00000229340 MAST1Q9Y2H9 1570 aa20.7■□□□□ 0.9
RAB35-201ENST00000229340 ARHGAP5Q13017 1502 aa20.69■□□□□ 0.9
RAB35-201ENST00000229340 ZNF710Q8N1W2 664 aa20.69■□□□□ 0.9
RAB35-201ENST00000229340 TRIM35Q9UPQ4 493 aa20.69■□□□□ 0.9
RAB35-201ENST00000229340 TRAK1Q9UPV9 953 aa20.69■□□□□ 0.9
RAB35-201ENST00000229340 ZDHHC9Q9Y397 364 aa20.69■□□□□ 0.9
RAB35-201ENST00000229340 FGD1P98174 961 aa20.69■□□□□ 0.9
RAB35-201ENST00000229340 CDC45O75419 566 aa20.68■□□□□ 0.9
RAB35-201ENST00000229340 FOXD4L6Q3SYB3 417 aaPredicted RBP20.68■□□□□ 0.9
RAB35-201ENST00000229340 TPRNQ4KMQ1 711 aa20.68■□□□□ 0.9
RAB35-201ENST00000229340 FOXD4L3Q6VB84 417 aaPredicted RBP20.68■□□□□ 0.9
RAB35-201ENST00000229340 MCM5P33992 734 aa20.68■□□□□ 0.9
RAB35-201ENST00000229340 TMPOP42166 694 aaKnown RBP20.68■□□□□ 0.9
RAB35-201ENST00000229340 KIAA2012Q0VF49 1180 aa20.68■□□□□ 0.9
RAB35-201ENST00000229340 PPIP5K1Q6PFW1 1433 aa20.68■□□□□ 0.9
RAB35-201ENST00000229340 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
RAB35-201ENST00000229340 CFAP74Q9C0B2 1584 aa20.67■□□□□ 0.9
RAB35-201ENST00000229340 ZNF518AQ6AHZ1 1483 aa20.67■□□□□ 0.9
RAB35-201ENST00000229340 IGSF3O75054 1194 aa20.67■□□□□ 0.9
RAB35-201ENST00000229340 GSPT1P15170 499 aaKnown RBP20.67■□□□□ 0.9
RAB35-201ENST00000229340 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
RAB35-201ENST00000229340 RABEP1Q15276 862 aa20.67■□□□□ 0.9
RAB35-201ENST00000229340 ATP2B3Q16720 1220 aa20.66■□□□□ 0.9
RAB35-201ENST00000229340 MYRIPQ8NFW9 859 aa20.66■□□□□ 0.9
RAB35-201ENST00000229340 SPDYE4A6NLX3 237 aa20.66■□□□□ 0.9
RAB35-201ENST00000229340 CT47B1P0C2W7 299 aaPredicted RBP20.66■□□□□ 0.9
RAB35-201ENST00000229340 PPP4R3BQ5MIZ7 849 aa20.65■□□□□ 0.9
RAB35-201ENST00000229340 SIRT2Q8IXJ6 389 aa20.65■□□□□ 0.9
RAB35-201ENST00000229340 UTP14CQ5TAP6 766 aaKnown RBP20.64■□□□□ 0.9
RAB35-201ENST00000229340 PREX2Q70Z35 1606 aa20.64■□□□□ 0.9
RAB35-201ENST00000229340 PTPRTO14522 1441 aa20.64■□□□□ 0.9
RAB35-201ENST00000229340 CD109Q6YHK3 1445 aa20.64■□□□□ 0.9
RAB35-201ENST00000229340 DUOX2Q9NRD8 1548 aa20.64■□□□□ 0.89
RAB35-201ENST00000229340 NOS1P29475 1434 aa20.64■□□□□ 0.89
RAB35-201ENST00000229340 C16orf71Q8IYS4 520 aaPredicted RBP20.64■□□□□ 0.89
RAB35-201ENST00000229340 ELL2O00472 640 aaPredicted RBP20.63■□□□□ 0.89
RAB35-201ENST00000229340 ZBTB7BO15156 539 aaPredicted RBP20.62■□□□□ 0.89
RAB35-201ENST00000229340 GCC1Q96CN9 775 aa20.62■□□□□ 0.89
RAB35-201ENST00000229340 TTC12Q9H892 705 aaPredicted RBP20.62■□□□□ 0.89
RAB35-201ENST00000229340 CLTCL1P53675 1640 aa20.62■□□□□ 0.89
RAB35-201ENST00000229340 APBB1O00213 710 aa20.61■□□□□ 0.89
RAB35-201ENST00000229340 USP26Q9BXU7 913 aa20.6■□□□□ 0.89
RAB35-201ENST00000229340 CHD1O14646 1710 aa20.6■□□□□ 0.89
RAB35-201ENST00000229340 ARHGAP31Q2M1Z3 1444 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms