RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 KRT27Q7Z3Y8 459 aa17.19■□□□□ 0.34
FRG1-201ENST00000226798 THSD7AQ9UPZ6 1657 aa17.18■□□□□ 0.34
FRG1-201ENST00000226798 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
FRG1-201ENST00000226798 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
FRG1-201ENST00000226798 PMFBP1Q8TBY8 1022 aa17.18■□□□□ 0.34
FRG1-201ENST00000226798 CCDC9Q9Y3X0 531 aaKnown RBP17.18■□□□□ 0.34
FRG1-201ENST00000226798 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
FRG1-201ENST00000226798 ITSN1Q15811 1721 aa17.17■□□□□ 0.34
FRG1-201ENST00000226798 EIF3AQ14152 1382 aaKnown RBP17.16■□□□□ 0.34
FRG1-201ENST00000226798 TNS1Q9HBL0 1735 aaKnown RBP17.16■□□□□ 0.34
FRG1-201ENST00000226798 POGKQ9P215 609 aa17.16■□□□□ 0.34
FRG1-201ENST00000226798 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
FRG1-201ENST00000226798 ARHGEF28Q8N1W1 1705 aaKnown RBP17.16■□□□□ 0.34
FRG1-201ENST00000226798 KCNA4P22459 653 aa17.15■□□□□ 0.34
FRG1-201ENST00000226798 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
FRG1-201ENST00000226798 GPRASP1Q5JY77 1395 aa17.14■□□□□ 0.33
FRG1-201ENST00000226798 PHRF1Q9P1Y6 1649 aaKnown RBP17.14■□□□□ 0.33
FRG1-201ENST00000226798 FAM98CQ17RN3 349 aaKnown RBP17.13■□□□□ 0.33
FRG1-201ENST00000226798 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
FRG1-201ENST00000226798 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
FRG1-201ENST00000226798 DISP2A7MBM2 1401 aa17.12■□□□□ 0.33
FRG1-201ENST00000226798 ATP7BP35670 1465 aa17.12■□□□□ 0.33
FRG1-201ENST00000226798 BAG6P46379 1132 aa17.11■□□□□ 0.33
FRG1-201ENST00000226798 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
FRG1-201ENST00000226798 SPATA31A5Q5VU36 1347 aa17.11■□□□□ 0.33
FRG1-201ENST00000226798 SPATA31A7Q8IWB4 1347 aa17.11■□□□□ 0.33
FRG1-201ENST00000226798 MINK1Q8N4C8 1332 aaPredicted RBP17.11■□□□□ 0.33
FRG1-201ENST00000226798 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
FRG1-201ENST00000226798 A0A0G2JS52 829 aa17.1■□□□□ 0.33
FRG1-201ENST00000226798 CAPN15O75808 1086 aa17.1■□□□□ 0.33
FRG1-201ENST00000226798 MYT1Q01538 1121 aa17.1■□□□□ 0.33
FRG1-201ENST00000226798 WASLO00401 505 aaPredicted RBP17.09■□□□□ 0.33
FRG1-201ENST00000226798 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
FRG1-201ENST00000226798 HRCP23327 699 aa17.07■□□□□ 0.32
FRG1-201ENST00000226798 DSG3P32926 999 aa17.07■□□□□ 0.32
FRG1-201ENST00000226798 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
FRG1-201ENST00000226798 EN1Q05925 392 aaPredicted RBP17.05■□□□□ 0.32
FRG1-201ENST00000226798 FAM182BQ5T319 152 aa17.05■□□□□ 0.32
FRG1-201ENST00000226798 NGDNQ8NEJ9 315 aaKnown RBP17.05■□□□□ 0.32
FRG1-201ENST00000226798 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
FRG1-201ENST00000226798 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
FRG1-201ENST00000226798 NRKQ7Z2Y5 1582 aa17.04■□□□□ 0.32
FRG1-201ENST00000226798 RREB1Q92766 1687 aa17.04■□□□□ 0.32
FRG1-201ENST00000226798 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
FRG1-201ENST00000226798 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
FRG1-201ENST00000226798 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
FRG1-201ENST00000226798 KIAA1210Q9ULL0 1709 aa17.03■□□□□ 0.32
FRG1-201ENST00000226798 LMO7Q8WWI1 1683 aa17.02■□□□□ 0.32
FRG1-201ENST00000226798 PAK3O75914 559 aaPredicted RBP17.02■□□□□ 0.32
FRG1-201ENST00000226798 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
FRG1-201ENST00000226798 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
FRG1-201ENST00000226798 NUDT16Q96DE0 195 aaKnown RBP17.01■□□□□ 0.31
FRG1-201ENST00000226798 NUP188Q5SRE5 1749 aa17■□□□□ 0.31
FRG1-201ENST00000226798 R3HDM1Q15032 1099 aaKnown RBP16.99■□□□□ 0.31
FRG1-201ENST00000226798 CAMTA1Q9Y6Y1 1673 aa16.98■□□□□ 0.31
FRG1-201ENST00000226798 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
FRG1-201ENST00000226798 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
FRG1-201ENST00000226798 PARD3Q8TEW0 1356 aa16.98■□□□□ 0.31
FRG1-201ENST00000226798 PARP4Q9UKK3 1724 aaKnown RBP16.97■□□□□ 0.31
FRG1-201ENST00000226798 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
FRG1-201ENST00000226798 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
FRG1-201ENST00000226798 CAMKK2Q96RR4 588 aa16.97■□□□□ 0.31
FRG1-201ENST00000226798 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
FRG1-201ENST00000226798 STRN4Q9NRL3 753 aa16.96■□□□□ 0.31
FRG1-201ENST00000226798 CPDO75976 1380 aa16.96■□□□□ 0.31
FRG1-201ENST00000226798 TRIM37O94972 964 aa16.95■□□□□ 0.3
FRG1-201ENST00000226798 ZC3H6P61129 1189 aaKnown RBP16.95■□□□□ 0.3
FRG1-201ENST00000226798 BARGINQ6ZT62 677 aa16.95■□□□□ 0.3
FRG1-201ENST00000226798 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
FRG1-201ENST00000226798 USP19O94966 1318 aa16.95■□□□□ 0.3
FRG1-201ENST00000226798 ACEP12821 1306 aa16.95■□□□□ 0.3
FRG1-201ENST00000226798 NUTM2GQ5VZR2 741 aa16.94■□□□□ 0.3
FRG1-201ENST00000226798 PLEKHG3A1L390 1219 aa16.93■□□□□ 0.3
FRG1-201ENST00000226798 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
FRG1-201ENST00000226798 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
FRG1-201ENST00000226798 PEAK1Q9H792 1746 aa16.92■□□□□ 0.3
FRG1-201ENST00000226798 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
FRG1-201ENST00000226798 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
FRG1-201ENST00000226798 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
FRG1-201ENST00000226798 COL5A2P05997 1499 aaPredicted RBP16.91■□□□□ 0.3
FRG1-201ENST00000226798 QRICH2Q9H0J4 1663 aa16.91■□□□□ 0.3
FRG1-201ENST00000226798 UTRNP46939 3433 aa16.9■□□□□ 0.3
FRG1-201ENST00000226798 APBA3O96018 575 aa16.9■□□□□ 0.3
FRG1-201ENST00000226798 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
FRG1-201ENST00000226798 WNK3Q9BYP7 1800 aa16.9■□□□□ 0.3
FRG1-201ENST00000226798 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
FRG1-201ENST00000226798 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
FRG1-201ENST00000226798 PPIP5K1Q6PFW1 1433 aa16.89■□□□□ 0.29
FRG1-201ENST00000226798 TCP11L2Q8N4U5 519 aa16.89■□□□□ 0.29
FRG1-201ENST00000226798 ABTB2Q8N961 1025 aa16.89■□□□□ 0.29
FRG1-201ENST00000226798 SLIT3O75094 1523 aa16.88■□□□□ 0.29
FRG1-201ENST00000226798 EVA1CP58658 441 aa16.88■□□□□ 0.29
FRG1-201ENST00000226798 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
FRG1-201ENST00000226798 THRAP3Q9Y2W1 955 aaKnown RBP16.87■□□□□ 0.29
FRG1-201ENST00000226798 BRD4O60885 1362 aaPredicted RBP16.87■□□□□ 0.29
FRG1-201ENST00000226798 COL18A1P39060 1754 aa16.87■□□□□ 0.29
FRG1-201ENST00000226798 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
FRG1-201ENST00000226798 CRB1P82279 1406 aa16.86■□□□□ 0.29
FRG1-201ENST00000226798 GCP02774 474 aa16.85■□□□□ 0.29
FRG1-201ENST00000226798 NBPF1Q3BBV0 1214 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms